Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
08:07:35 (3888041): wrapper (7.7.26015): starting
08:07:35 (3888041): wrapper: running run_atlas (--nthreads 12)
[2025-10-22 08:07:35] Arguments: --nthreads 12
[2025-10-22 08:07:35] Threads: 12
[2025-10-22 08:07:35] Checking for CVMFS
[2025-10-22 08:07:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 08:07:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 08:07:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 08:07:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 08:07:36] 2.11.0.0 3615873 25 49564 151987 2 188 3749452 6144000 11243 130560 0 626199 99.999 2723 323 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-22 08:07:36] CVMFS is ok
[2025-10-22 08:07:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 08:07:36] Checking for apptainer binary...
[2025-10-22 08:07:36] apptainer is not installed, using version from CVMFS
[2025-10-22 08:07:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 08:07:36] radiat0r
[2025-10-22 08:07:36] apptainer works
[2025-10-22 08:07:36] Set ATHENA_PROC_NUMBER=12
[2025-10-22 08:07:36] Set ATHENA_CORE_NUMBER=12
[2025-10-22 08:07:36] Starting ATLAS job with PandaID=6852948187
[2025-10-22 08:07:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 08:55:59]  *** The last 200 lines of the pilot log: ***
[2025-10-22 08:55:59] ]
[2025-10-22 08:55:59] 2025-10-22 08:55:10,365 | INFO     | transferring file log.46771637._054292.job.log.tgz.1 from /var/lib/boinc/slots/10/PanDA_Pilot-6852948187/log.46771637._054292.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-22 08:55:59] 2025-10-22 08:55:10,365 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/10/PanDA_Pilot-6852948187/log.46771637._054292.job.log.tgz.1 /var/lib/boinc/slots/10/log.46771637._054292.j
[2025-10-22 08:55:59] 2025-10-22 08:55:10,383 | INFO     | adding to output.list: log.46771637._054292.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/47/log.46771637._054292.job.log.tg
[2025-10-22 08:55:59] 2025-10-22 08:55:10,384 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-22 08:55:59] 2025-10-22 08:55:10,384 | INFO     | summary of transferred files:
[2025-10-22 08:55:59] 2025-10-22 08:55:10,384 | INFO     |  -- lfn=log.46771637._054292.job.log.tgz.1, status_code=0, status=transferred
[2025-10-22 08:55:59] 2025-10-22 08:55:10,384 | INFO     | stage-out finished correctly
[2025-10-22 08:55:59] 2025-10-22 08:55:10,983 | INFO     | PID=3896644 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-22 08:55:59] 2025-10-22 08:55:10,983 | INFO     | .. there are 3 such processes running
[2025-10-22 08:55:59] 2025-10-22 08:55:11,503 | INFO     | monitor loop #205: job 0:6852948187 is in state 'finished'
[2025-10-22 08:55:59] 2025-10-22 08:55:11,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 08:55:59] 2025-10-22 08:55:11,984 | INFO     | time since job start (2841s) is within the limit (172800.0s)
[2025-10-22 08:55:59] 2025-10-22 08:55:13,792 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-22 08:55:59] 2025-10-22 08:55:13,989 | INFO     | time since job start (2843s) is within the limit (172800.0s)
[2025-10-22 08:55:59] 2025-10-22 08:55:14,006 | INFO     | monitor loop #206: job 0:6852948187 is in state 'finished'
[2025-10-22 08:55:59] 2025-10-22 08:55:14,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 08:55:59] 2025-10-22 08:55:15,995 | INFO     | time since job start (2845s) is within the limit (172800.0s)
[2025-10-22 08:55:59] 2025-10-22 08:55:16,509 | INFO     | monitor loop #207: job 0:6852948187 is in state 'finished'
[2025-10-22 08:55:59] 2025-10-22 08:55:16,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 08:55:59] 2025-10-22 08:55:16,745 | INFO     | job 6852948187 has state=finished
[2025-10-22 08:55:59] 2025-10-22 08:55:16,745 | INFO     | preparing for final server update for job 6852948187 in state='finished'
[2025-10-22 08:55:59] 2025-10-22 08:55:16,746 | INFO     | this job has now completed (state=finished)
[2025-10-22 08:55:59] 2025-10-22 08:55:16,746 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-22 08:55:59] 2025-10-22 08:55:16,746 | INFO     | log transfer has been attempted: DONE
[2025-10-22 08:55:59] 2025-10-22 08:55:16,746 | INFO     | job 6852948187 has finished - writing final server update
[2025-10-22 08:55:59] 2025-10-22 08:55:16,746 | INFO     | total number of processed events: 400 (read)
[2025-10-22 08:55:59] 2025-10-22 08:55:16,747 | INFO     | executing command: lscpu
[2025-10-22 08:55:59] 2025-10-22 08:55:16,885 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-22 08:55:59] 2025-10-22 08:55:18,001 | INFO     | time since job start (2848s) is within the limit (172800.0s)
[2025-10-22 08:55:59] 2025-10-22 08:55:19,012 | INFO     | monitor loop #208: job 0:6852948187 is in state 'finished'
[2025-10-22 08:55:59] 2025-10-22 08:55:19,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 08:55:59] 2025-10-22 08:55:20,007 | INFO     | time since job start (2850s) is within the limit (172800.0s)
[2025-10-22 08:55:59] 2025-10-22 08:55:21,515 | INFO     | monitor loop #209: job 0:6852948187 is in state 'finished'
[2025-10-22 08:55:59] 2025-10-22 08:55:21,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 08:55:59] 2025-10-22 08:55:22,013 | INFO     | time since job start (2852s) is within the limit (172800.0s)
[2025-10-22 08:55:59] 2025-10-22 08:55:22,141 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-22 08:55:59] 2025-10-22 08:55:22,208 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 1874.12424609375
[2025-10-22 08:55:59] 2025-10-22 08:55:22,305 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6852948187/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 08:55:59] 2025-10-22 08:55:22,305 | INFO     | extracted standard info from prmon json
[2025-10-22 08:55:59] 2025-10-22 08:55:22,306 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 08:55:59] 2025-10-22 08:55:22,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 08:55:59] 2025-10-22 08:55:22,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 08:55:59] 2025-10-22 08:55:22,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 08:55:59] 2025-10-22 08:55:22,307 | INFO     | fitting pss+swap vs Time
[2025-10-22 08:55:59] 2025-10-22 08:55:22,307 | INFO     | sum of square deviations: 18381740.0
[2025-10-22 08:55:59] 2025-10-22 08:55:22,308 | INFO     | sum of deviations: 1226241276.0
[2025-10-22 08:55:59] 2025-10-22 08:55:22,308 | INFO     | mean x: 1761121967.0
[2025-10-22 08:55:59] 2025-10-22 08:55:22,308 | INFO     | mean y: 2656610.153846154
[2025-10-22 08:55:59] 2025-10-22 08:55:22,308 | INFO     | -- intersect: -117481349148.04477
[2025-10-22 08:55:59] 2025-10-22 08:55:22,308 | INFO     | intersect: -117481349148.04477
[2025-10-22 08:55:59] 2025-10-22 08:55:22,308 | INFO     | chi2: 0.03144108162013116
[2025-10-22 08:55:59] 2025-10-22 08:55:22,308 | INFO     | -- intersect: -117481349148.04477
[2025-10-22 08:55:59] 2025-10-22 08:55:22,308 | INFO     | current memory leak: 66.71 B/s (using 39 data points, chi2=0.03)
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | could have reported an average CPU frequency of 2228 MHz (5 samples)
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | ..............................
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | . Timing measurements:
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | . get job = 0 s
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | . initial setup = 1 s
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | . payload setup = 8 s
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | . stage-in = 0 s
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | . payload execution = 2809 s
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | . stage-out = 0 s
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | . log creation = 0 s
[2025-10-22 08:55:59] 2025-10-22 08:55:22,309 | INFO     | ..............................
[2025-10-22 08:55:59] 2025-10-22 08:55:22,502 | INFO     | 
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | job summary report
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | --------------------------------------------------
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | PanDA job id: 6852948187
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | task id: 46771637
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | errors: (none)
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | pilot state: finished 
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | transexitcode: 0
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | exeerrorcode: 0
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | exeerrordiag: 
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | exitcode: 0
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | exitmsg: OK
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | cpuconsumptiontime: 29124 s
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | nevents: 400
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | neventsw: 0
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | pid: 3904828
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | pgrp: 3904828
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | corecount: 12
[2025-10-22 08:55:59] 2025-10-22 08:55:22,503 | INFO     | event service: False
[2025-10-22 08:55:59] 2025-10-22 08:55:22,504 | INFO     | sizes: {0: 2348932, 1: 2348932, 6: 2349222, 11: 2349250, 2821: 2374673, 2822: 2383673, 2825: 2383857, 2834: 2384083}
[2025-10-22 08:55:59] 2025-10-22 08:55:22,504 | INFO     | --------------------------------------------------
[2025-10-22 08:55:59] 2025-10-22 08:55:22,504 | INFO     | 
[2025-10-22 08:55:59] 2025-10-22 08:55:22,504 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-10-22 08:55:59] 2025-10-22 08:55:22,524 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,524 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,524 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,524 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,525 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,526 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 08:55:59] 2025-10-22 08:55:22,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,526 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 08:55:59] 2025-10-22 08:55:22,526 | INFO     | job 6852948187 has completed (purged errors)
[2025-10-22 08:55:59] 2025-10-22 08:55:22,526 | INFO     | overall cleanup function is called
[2025-10-22 08:55:59] 2025-10-22 08:55:23,537 | INFO     | --- collectZombieJob: --- 10, [3904828]
[2025-10-22 08:55:59] 2025-10-22 08:55:23,537 | INFO     | zombie collector waiting for pid 3904828
[2025-10-22 08:55:59] 2025-10-22 08:55:23,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 08:55:59] 2025-10-22 08:55:23,537 | INFO     | collected zombie processes
[2025-10-22 08:55:59] 2025-10-22 08:55:23,537 | INFO     | will attempt to kill all subprocesses of pid=3904828
[2025-10-22 08:55:59] 2025-10-22 08:55:24,039 | INFO     | process IDs to be killed: [3904828] (in reverse order)
[2025-10-22 08:55:59] 2025-10-22 08:55:24,189 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 08:55:59] 2025-10-22 08:55:24,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 08:55:59] 2025-10-22 08:55:24,207 | INFO     | did not find any defunct processes belonging to 3904828
[2025-10-22 08:55:59] 2025-10-22 08:55:24,219 | INFO     | did not find any defunct processes belonging to 3904828
[2025-10-22 08:55:59] 2025-10-22 08:55:24,219 | INFO     | ready for new job
[2025-10-22 08:55:59] 2025-10-22 08:55:24,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 08:55:59] 2025-10-22 08:55:24,220 | INFO     | ***************************************
[2025-10-22 08:55:59] 2025-10-22 08:55:24,220 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 08:55:59] 2025-10-22 08:55:24,220 | INFO     | ***************************************
[2025-10-22 08:55:59] 2025-10-22 08:55:24,220 | INFO     | 
[2025-10-22 08:55:59] 2025-10-22 08:55:24,249 | INFO     | architecture information:
[2025-10-22 08:55:59] 2025-10-22 08:55:24,249 | INFO     | executing command: cat /etc/os-release
[2025-10-22 08:55:59] 2025-10-22 08:55:24,264 | INFO     | cat /etc/os-release:
[2025-10-22 08:55:59] NAME="CentOS Linux"
[2025-10-22 08:55:59] VERSION="7 (Core)"
[2025-10-22 08:55:59] ID="centos"
[2025-10-22 08:55:59] ID_LIKE="rhel fedora"
[2025-10-22 08:55:59] VERSION_ID="7"
[2025-10-22 08:55:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 08:55:59] ANSI_COLOR="0;31"
[2025-10-22 08:55:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 08:55:59] HOME_URL="https://www.centos.org/"
[2025-10-22 08:55:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 08:55:59] 
[2025-10-22 08:55:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 08:55:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 08:55:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 08:55:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 08:55:59] 
[2025-10-22 08:55:59] 2025-10-22 08:55:24,265 | INFO     | ***************************************
[2025-10-22 08:55:59] 2025-10-22 08:55:24,768 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-10-22 08:55:59] 2025-10-22 08:55:24,793 | INFO     | sufficient remaining disk space (1695771787264 B)
[2025-10-22 08:55:59] 2025-10-22 08:55:24,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 08:55:59] 2025-10-22 08:55:24,793 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 08:55:59] 2025-10-22 08:55:24,794 | INFO     | update_server=False
[2025-10-22 08:55:59] 2025-10-22 08:55:24,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 08:55:59] 2025-10-22 08:55:24,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 08:55:59] 2025-10-22 08:55:25,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 08:55:59] 2025-10-22 08:55:25,024 | INFO     | aborting loop
[2025-10-22 08:55:59] 2025-10-22 08:55:25,046 | INFO     | all data control threads have been joined
[2025-10-22 08:55:59] 2025-10-22 08:55:25,158 | INFO     | all payload control threads have been joined
[2025-10-22 08:55:59] 2025-10-22 08:55:25,791 | INFO     | all job control threads have been joined
[2025-10-22 08:55:59] 2025-10-22 08:55:25,799 | INFO     | [job] retrieve thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:25,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 08:55:59] 2025-10-22 08:55:25,980 | INFO     | [payload] failed_post thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:26,030 | INFO     | [job] job monitor thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:26,052 | INFO     | [data] control thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:26,164 | INFO     | [payload] control thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:26,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:26,520 | INFO     | [job] validate thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:26,796 | INFO     | [job] control thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:26,834 | INFO     | [payload] validate_post thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:26,896 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:27,115 | INFO     | [data] copytool_in thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:27,119 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:27,247 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:27,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 08:55:59] 2025-10-22 08:55:27,968 | INFO     | [data] copytool_out thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:28,387 | INFO     | [job] queue monitor thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:28,800 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 08:55:59] 2025-10-22 08:55:54,170 | INFO     | [monitor] cgroup control has ended
[2025-10-22 08:55:59] 2025-10-22 08:55:54,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140056233195328)>', '<ExcThread(monitor, started 140055653902080)>']
[2025-10-22 08:55:59] 2025-10-22 08:55:55,638 | INFO     | PID=3896644 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 08:55:59] 2025-10-22 08:55:55,639 | INFO     | .. there are 3 such processes running
[2025-10-22 08:55:59] 2025-10-22 08:55:55,639 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 08:55:59] 2025-10-22 08:55:55,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 08:55:59] 2025-10-22 08:55:55,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 08:55:59] 2025-10-22 08:55:55,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 08:55:59] 2025-10-22 08:55:55,639 | INFO     | [monitor] control thread has ended
[2025-10-22 08:55:59] 2025-10-22 08:55:59,278 | INFO     | all workflow threads have been joined
[2025-10-22 08:55:59] 2025-10-22 08:55:59,278 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 08:55:59] 2025-10-22 08:55:59,279 | INFO     | traces error code: 0
[2025-10-22 08:55:59] 2025-10-22 08:55:59,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 08:55:59] 2025-10-22 08:55:59,396 [wrapper] ==== pilot stdout END ====
[2025-10-22 08:55:59] 2025-10-22 08:55:59,401 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 08:55:59] 2025-10-22 08:55:59,403 [wrapper] pilotpid: 3896644
[2025-10-22 08:55:59] 2025-10-22 08:55:59,405 [wrapper] Pilot exit status: 0
[2025-10-22 08:55:59] 2025-10-22 08:55:59,412 [wrapper] pandaids: 6852948187
[2025-10-22 08:55:59] 2025-10-22 08:55:59,520 [wrapper] cleanup supervisor_pilot 4000115 3896645
[2025-10-22 08:55:59] 2025-10-22 08:55:59,523 [wrapper] Test setup, not cleaning
[2025-10-22 08:55:59] 2025-10-22 08:55:59,525 [wrapper] apfmon messages muted
[2025-10-22 08:55:59] 2025-10-22 08:55:59,527 [wrapper] ==== wrapper stdout END ====
[2025-10-22 08:55:59] 2025-10-22 08:55:59,529 [wrapper] ==== wrapper stderr END ====
[2025-10-22 08:55:59]  *** Error codes and diagnostics ***
[2025-10-22 08:55:59]     "exeErrorCode": 0,
[2025-10-22 08:55:59]     "exeErrorDiag": "",
[2025-10-22 08:55:59]     "pilotErrorCode": 0,
[2025-10-22 08:55:59]     "pilotErrorDiag": "",
[2025-10-22 08:55:59]  *** Listing of results directory ***
[2025-10-22 08:55:59] total 442084
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc    557409 Oct 20 21:57 pilot3.tar.gz
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc      5112 Oct 20 22:48 queuedata.json
[2025-10-22 08:55:59] -rwx------ 1 boinc boinc     36292 Oct 20 22:49 runpilot2-wrapper.sh
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc       100 Oct 22 08:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 08:55:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 08:07 run_atlas
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc       105 Oct 22 08:07 job.xml
[2025-10-22 08:55:59] -rw-r--r-- 2 boinc boinc 227665012 Oct 22 08:07 EVNT.46771634._001037.pool.root.1
[2025-10-22 08:55:59] -rw-r--r-- 2 boinc boinc     15120 Oct 22 08:07 start_atlas.sh
[2025-10-22 08:55:59] drwxrwx--x 2 boinc boinc      4096 Oct 22 08:07 shared
[2025-10-22 08:55:59] -rw-r--r-- 2 boinc boinc    569680 Oct 22 08:07 input.tar.gz
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc      9398 Oct 22 08:07 init_data.xml
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc         0 Oct 22 08:07 boinc_setup_complete
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc         0 Oct 22 08:07 boinc_lockfile
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc      2560 Oct 22 08:07 pandaJob.out
[2025-10-22 08:55:59] -rw------- 1 boinc boinc    978092 Oct 22 08:07 agis_schedconf.cvmfs.json
[2025-10-22 08:55:59] -rw------- 1 boinc boinc   1560740 Oct 22 08:07 agis_ddmendpoints.agis.ALL.json
[2025-10-22 08:55:59] drwx------ 5 boinc boinc      4096 Oct 22 08:07 pilot3
[2025-10-22 08:55:59] -rw------- 1 boinc boinc 219534908 Oct 22 08:54 HITS.46771637._054292.pool.root.1
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc       529 Oct 22 08:55 boinc_task_state.xml
[2025-10-22 08:55:59] -rw------- 1 boinc boinc      1032 Oct 22 08:55 memory_monitor_summary.json
[2025-10-22 08:55:59] -rw------- 1 boinc boinc    357006 Oct 22 08:55 log.46771637._054292.job.log.tgz.1
[2025-10-22 08:55:59] -rw------- 1 boinc boinc      7746 Oct 22 08:55 heartbeat.json
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc      8192 Oct 22 08:55 boinc_mmap_file
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc        27 Oct 22 08:55 wrapper_checkpoint.txt
[2025-10-22 08:55:59] -rw------- 1 boinc boinc        95 Oct 22 08:55 pilot_heartbeat.json
[2025-10-22 08:55:59] -rw------- 1 boinc boinc      4826 Oct 22 08:55 pilotlog.txt
[2025-10-22 08:55:59] -rw------- 1 boinc boinc    431639 Oct 22 08:55 log.46771637._054292.job.log.1
[2025-10-22 08:55:59] -rw------- 1 boinc boinc       357 Oct 22 08:55 output.list
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc       620 Oct 22 08:55 runtime_log
[2025-10-22 08:55:59] -rw------- 1 boinc boinc    808960 Oct 22 08:55 result.tar.gz
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc      8672 Oct 22 08:55 runtime_log.err
[2025-10-22 08:55:59] -rw------- 1 boinc boinc       643 Oct 22 08:55 Pa6MDmPsDV8n9Rq4apOajLDm4fhM0noT9bVof3QYDm68dMDmh2fgRo.diag
[2025-10-22 08:55:59] -rw-r--r-- 1 boinc boinc     22169 Oct 22 08:55 stderr.txt
[2025-10-22 08:55:59] HITS file was successfully produced:
[2025-10-22 08:55:59] -rw------- 1 boinc boinc 219534908 Oct 22 08:54 shared/HITS.pool.root.1
[2025-10-22 08:55:59]  *** Contents of shared directory: ***
[2025-10-22 08:55:59] total 438100
[2025-10-22 08:55:59] -rw-r--r-- 2 boinc boinc 227665012 Oct 22 08:07 ATLAS.root_0
[2025-10-22 08:55:59] -rw-r--r-- 2 boinc boinc     15120 Oct 22 08:07 start_atlas.sh
[2025-10-22 08:55:59] -rw-r--r-- 2 boinc boinc    569680 Oct 22 08:07 input.tar.gz
[2025-10-22 08:55:59] -rw------- 1 boinc boinc 219534908 Oct 22 08:54 HITS.pool.root.1
[2025-10-22 08:55:59] -rw------- 1 boinc boinc    808960 Oct 22 08:55 result.tar.gz
08:56:01 (3888041): run_atlas exited; CPU time 29256.266978
08:56:01 (3888041): called boinc_finish(0)

</stderr_txt>
]]>

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