Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:22:00 (2909138): wrapper (7.7.26015): starting
22:22:00 (2909138): wrapper: running run_atlas (--nthreads 11)
[2025-10-21 22:22:00] Arguments: --nthreads 11
[2025-10-21 22:22:00] Threads: 11
[2025-10-21 22:22:00] Checking for CVMFS
[2025-10-21 22:22:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 22:22:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 22:22:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 22:22:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 22:22:02] 2.13.2.0 79137 148696 510760 151979 1 484 31199393 40960000 40443 16776704 0 689275151 99.831 306655885 31793 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-21 22:22:02] CVMFS is ok
[2025-10-21 22:22:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 22:22:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 22:22:02] Further information can be found at the LHC@home message board.
[2025-10-21 22:22:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 22:22:02] Checking for apptainer binary...
[2025-10-21 22:22:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 22:22:02] Running /usr/bin/apptainer --version
[2025-10-21 22:22:02] apptainer version 1.4.3-1.el9
[2025-10-21 22:22:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 22:22:02] c8-7-6.aglt2.org
[2025-10-21 22:22:02] apptainer works
[2025-10-21 22:22:02] Set ATHENA_PROC_NUMBER=11
[2025-10-21 22:22:02] Set ATHENA_CORE_NUMBER=11
[2025-10-21 22:22:02] Starting ATLAS job with PandaID=6852945269
[2025-10-21 22:22:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 00:06:22]  *** The last 200 lines of the pilot log: ***
[2025-10-22 00:06:22] 2025-10-22 04:05:02,991 | INFO     | .. there are 48 such processes running
[2025-10-22 00:06:22] 2025-10-22 04:05:03,991 | INFO     | time since job start (6118s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:04,997 | INFO     | monitor loop #406: job 0:6852945269 is in state 'finished'
[2025-10-22 00:06:22] 2025-10-22 04:05:04,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:06:22] 2025-10-22 04:05:06,005 | INFO     | time since job start (6121s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:07,525 | INFO     | monitor loop #407: job 0:6852945269 is in state 'finished'
[2025-10-22 00:06:22] 2025-10-22 04:05:07,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:06:22] 2025-10-22 04:05:08,011 | INFO     | time since job start (6123s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:10,028 | INFO     | time since job start (6125s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:10,036 | INFO     | monitor loop #408: job 0:6852945269 is in state 'finished'
[2025-10-22 00:06:22] 2025-10-22 04:05:10,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:06:22] 2025-10-22 04:05:12,048 | INFO     | time since job start (6127s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:12,552 | INFO     | monitor loop #409: job 0:6852945269 is in state 'finished'
[2025-10-22 00:06:22] 2025-10-22 04:05:12,552 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:06:22] 2025-10-22 04:05:14,092 | INFO     | time since job start (6129s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:15,061 | INFO     | monitor loop #410: job 0:6852945269 is in state 'finished'
[2025-10-22 00:06:22] 2025-10-22 04:05:15,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:06:22] 2025-10-22 04:05:16,104 | INFO     | time since job start (6131s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:17,568 | INFO     | monitor loop #411: job 0:6852945269 is in state 'finished'
[2025-10-22 00:06:22] 2025-10-22 04:05:17,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:06:22] 2025-10-22 04:05:18,117 | INFO     | time since job start (6133s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:20,117 | INFO     | monitor loop #412: job 0:6852945269 is in state 'finished'
[2025-10-22 00:06:22] 2025-10-22 04:05:20,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:06:22] 2025-10-22 04:05:20,125 | INFO     | time since job start (6135s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:22,131 | INFO     | time since job start (6137s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:22,623 | INFO     | monitor loop #413: job 0:6852945269 is in state 'finished'
[2025-10-22 00:06:22] 2025-10-22 04:05:22,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:06:22] 2025-10-22 04:05:24,138 | INFO     | time since job start (6139s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:25,129 | INFO     | monitor loop #414: job 0:6852945269 is in state 'finished'
[2025-10-22 00:06:22] 2025-10-22 04:05:25,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:06:22] 2025-10-22 04:05:27,087 | INFO     | PID=2919220 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 00:06:22] 2025-10-22 04:05:27,087 | INFO     | .. there are 49 such processes running
[2025-10-22 00:06:22] 2025-10-22 04:05:27,638 | INFO     | monitor loop #415: job 0:6852945269 is in state 'finished'
[2025-10-22 00:06:22] 2025-10-22 04:05:27,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:06:22] 2025-10-22 04:05:28,090 | INFO     | time since job start (6143s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:29,457 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-22 00:06:22] 2025-10-22 04:05:29,466 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3790.5843906249997
[2025-10-22 00:06:22] 2025-10-22 04:05:29,480 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6852945269/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 00:06:22] 2025-10-22 04:05:29,480 | INFO     | extracted standard info from prmon json
[2025-10-22 00:06:22] 2025-10-22 04:05:29,480 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 00:06:22] 2025-10-22 04:05:29,480 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 00:06:22] 2025-10-22 04:05:29,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 00:06:22] 2025-10-22 04:05:29,481 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 00:06:22] 2025-10-22 04:05:29,482 | INFO     | fitting pss+swap vs Time
[2025-10-22 00:06:22] 2025-10-22 04:05:29,482 | INFO     | sum of square deviations: 241429719.85869613
[2025-10-22 00:06:22] 2025-10-22 04:05:29,482 | INFO     | sum of deviations: -58450785.836956754
[2025-10-22 00:06:22] 2025-10-22 04:05:29,482 | INFO     | mean x: 1761102973.6847825
[2025-10-22 00:06:22] 2025-10-22 04:05:29,482 | INFO     | mean y: 2542314.902173913
[2025-10-22 00:06:22] 2025-10-22 04:05:29,482 | INFO     | -- intersect: 428910091.04806155
[2025-10-22 00:06:22] 2025-10-22 04:05:29,482 | INFO     | intersect: 428910091.04806155
[2025-10-22 00:06:22] 2025-10-22 04:05:29,482 | INFO     | chi2: 0.30103470343085015
[2025-10-22 00:06:22] 2025-10-22 04:05:29,482 | INFO     | -- intersect: 428910091.04806155
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | current memory leak: -0.24 B/s (using 92 data points, chi2=0.30)
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | could have reported an average CPU frequency of 3779 MHz (7 samples)
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | ..............................
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | . Timing measurements:
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | . get job = 0 s
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | . initial setup = 6 s
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | . payload setup = 38 s
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | . stage-in = 0 s
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | . payload execution = 6020 s
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | . stage-out = 2 s
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | . log creation = 0 s
[2025-10-22 00:06:22] 2025-10-22 04:05:29,483 | INFO     | ..............................
[2025-10-22 00:06:22] 2025-10-22 04:05:29,869 | INFO     | 
[2025-10-22 00:06:22] 2025-10-22 04:05:29,869 | INFO     | job summary report
[2025-10-22 00:06:22] 2025-10-22 04:05:29,869 | INFO     | --------------------------------------------------
[2025-10-22 00:06:22] 2025-10-22 04:05:29,869 | INFO     | PanDA job id: 6852945269
[2025-10-22 00:06:22] 2025-10-22 04:05:29,869 | INFO     | task id: 46771637
[2025-10-22 00:06:22] 2025-10-22 04:05:29,869 | INFO     | errors: (none)
[2025-10-22 00:06:22] 2025-10-22 04:05:29,869 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 00:06:22] 2025-10-22 04:05:29,869 | INFO     | pilot state: finished 
[2025-10-22 00:06:22] 2025-10-22 04:05:29,869 | INFO     | transexitcode: 0
[2025-10-22 00:06:22] 2025-10-22 04:05:29,869 | INFO     | exeerrorcode: 0
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | exeerrordiag: 
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | exitcode: 0
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | exitmsg: OK
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | cpuconsumptiontime: 27262 s
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | nevents: 400
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | neventsw: 0
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | pid: 2939988
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | pgrp: 2939988
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | corecount: 11
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | event service: False
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | sizes: {0: 2348758, 1: 2348957, 12: 2348957, 20: 2349247, 22: 2349275, 6060: 2376273, 6063: 2385271, 6066: 2385327, 6101: 2385521}
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | --------------------------------------------------
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | 
[2025-10-22 00:06:22] 2025-10-22 04:05:29,870 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-22 00:06:22] 2025-10-22 04:05:30,097 | INFO     | time since job start (6145s) is within the limit (172800.0s)
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 00:06:22] 2025-10-22 04:05:30,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 00:06:22] 2025-10-22 04:05:30,116 | INFO     | job 6852945269 has completed (purged errors)
[2025-10-22 00:06:22] 2025-10-22 04:05:30,116 | INFO     | overall cleanup function is called
[2025-10-22 00:06:22] 2025-10-22 04:05:31,124 | INFO     | --- collectZombieJob: --- 10, [2939988]
[2025-10-22 00:06:22] 2025-10-22 04:05:31,124 | INFO     | zombie collector waiting for pid 2939988
[2025-10-22 00:06:22] 2025-10-22 04:05:31,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 00:06:22] 2025-10-22 04:05:31,124 | INFO     | collected zombie processes
[2025-10-22 00:06:22] 2025-10-22 04:05:31,124 | INFO     | will attempt to kill all subprocesses of pid=2939988
[2025-10-22 00:06:22] 2025-10-22 04:05:32,990 | INFO     | process IDs to be killed: [2939988] (in reverse order)
[2025-10-22 00:06:22] 2025-10-22 04:05:33,301 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 00:06:22] 2025-10-22 04:05:33,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 00:06:22] 2025-10-22 04:05:33,328 | INFO     | did not find any defunct processes belonging to 2939988
[2025-10-22 00:06:22] 2025-10-22 04:05:33,355 | INFO     | did not find any defunct processes belonging to 2939988
[2025-10-22 00:06:22] 2025-10-22 04:05:33,355 | INFO     | ready for new job
[2025-10-22 00:06:22] 2025-10-22 04:05:33,355 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 00:06:22] 2025-10-22 04:05:33,357 | INFO     | ***************************************
[2025-10-22 00:06:22] 2025-10-22 04:05:33,358 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 00:06:22] 2025-10-22 04:05:33,358 | INFO     | ***************************************
[2025-10-22 00:06:22] 2025-10-22 04:05:33,358 | INFO     | 
[2025-10-22 00:06:22] 2025-10-22 04:05:33,363 | INFO     | architecture information:
[2025-10-22 00:06:22] 2025-10-22 04:05:33,363 | INFO     | executing command: cat /etc/os-release
[2025-10-22 00:06:22] 2025-10-22 04:05:33,441 | INFO     | cat /etc/os-release:
[2025-10-22 00:06:22] NAME="CentOS Linux"
[2025-10-22 00:06:22] VERSION="7 (Core)"
[2025-10-22 00:06:22] ID="centos"
[2025-10-22 00:06:22] ID_LIKE="rhel fedora"
[2025-10-22 00:06:22] VERSION_ID="7"
[2025-10-22 00:06:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 00:06:22] ANSI_COLOR="0;31"
[2025-10-22 00:06:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 00:06:22] HOME_URL="https://www.centos.org/"
[2025-10-22 00:06:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 00:06:22] 
[2025-10-22 00:06:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 00:06:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 00:06:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 00:06:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 00:06:22] 
[2025-10-22 00:06:22] 2025-10-22 04:05:33,441 | INFO     | ***************************************
[2025-10-22 00:06:22] 2025-10-22 04:05:33,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-22 00:06:22] 2025-10-22 04:05:34,079 | INFO     | sufficient remaining disk space (167159791616 B)
[2025-10-22 00:06:22] 2025-10-22 04:05:34,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 00:06:22] 2025-10-22 04:05:34,080 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 00:06:22] 2025-10-22 04:05:34,080 | INFO     | update_server=False
[2025-10-22 00:06:22] 2025-10-22 04:05:34,080 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 00:06:22] 2025-10-22 04:05:34,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 00:06:22] 2025-10-22 04:05:34,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 00:06:22] 2025-10-22 04:05:34,081 | INFO     | aborting loop
[2025-10-22 00:06:22] 2025-10-22 04:05:34,124 | INFO     | all payload control threads have been joined
[2025-10-22 00:06:22] 2025-10-22 04:05:34,140 | INFO     | all job control threads have been joined
[2025-10-22 00:06:22] 2025-10-22 04:05:34,294 | INFO     | all data control threads have been joined
[2025-10-22 00:06:22] 2025-10-22 04:05:34,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 00:06:22] 2025-10-22 04:05:35,087 | INFO     | [job] job monitor thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:35,090 | INFO     | [job] retrieve thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:35,129 | INFO     | [payload] control thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:35,146 | INFO     | [job] control thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:35,160 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:35,160 | INFO     | [job] validate thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:35,189 | INFO     | [payload] failed_post thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:35,300 | INFO     | [data] control thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:35,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:35,582 | INFO     | [job] queue monitor thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:36,095 | INFO     | [data] copytool_out thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:36,115 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:36,389 | INFO     | [payload] validate_post thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:36,394 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:36,529 | INFO     | [data] copytool_in thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:05:37,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 00:06:22] 2025-10-22 04:05:41,468 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 00:06:22] 2025-10-22 04:06:03,980 | INFO     | PID=2919220 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 00:06:22] 2025-10-22 04:06:03,980 | INFO     | .. there are 52 such processes running
[2025-10-22 00:06:22] 2025-10-22 04:06:03,981 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 00:06:22] 2025-10-22 04:06:03,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 00:06:22] 2025-10-22 04:06:03,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 00:06:22] 2025-10-22 04:06:15,116 | INFO     | [monitor] cgroup control has ended
[2025-10-22 00:06:22] 2025-10-22 04:06:15,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925032224576)>', '<ExcThread(monitor, started 139924305069824)>']
[2025-10-22 00:06:22] 2025-10-22 04:06:16,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 00:06:22] 2025-10-22 04:06:16,057 | INFO     | [monitor] control thread has ended
[2025-10-22 00:06:22] 2025-10-22 04:06:20,480 | INFO     | all workflow threads have been joined
[2025-10-22 00:06:22] 2025-10-22 04:06:20,480 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 00:06:22] 2025-10-22 04:06:20,480 | INFO     | traces error code: 0
[2025-10-22 00:06:22] 2025-10-22 04:06:20,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 00:06:22] 2025-10-22 04:06:20,672 [wrapper] ==== pilot stdout END ====
[2025-10-22 00:06:22] 2025-10-22 04:06:20,724 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 00:06:22] 2025-10-22 04:06:20,761 [wrapper] pilotpid: 2919220
[2025-10-22 00:06:22] 2025-10-22 04:06:20,777 [wrapper] Pilot exit status: 0
[2025-10-22 00:06:22] 2025-10-22 04:06:20,977 [wrapper] pandaids: 6852945269
[2025-10-22 00:06:22] 2025-10-22 04:06:21,951 [wrapper] cleanup supervisor_pilot 3753608 2919221
[2025-10-22 00:06:22] 2025-10-22 04:06:21,983 [wrapper] Test setup, not cleaning
[2025-10-22 00:06:22] 2025-10-22 04:06:22,028 [wrapper] apfmon messages muted
[2025-10-22 00:06:22] 2025-10-22 04:06:22,110 [wrapper] ==== wrapper stdout END ====
[2025-10-22 00:06:22] 2025-10-22 04:06:22,140 [wrapper] ==== wrapper stderr END ====
[2025-10-22 00:06:22]  *** Error codes and diagnostics ***
[2025-10-22 00:06:22]     "exeErrorCode": 0,
[2025-10-22 00:06:22]     "exeErrorDiag": "",
[2025-10-22 00:06:22]     "pilotErrorCode": 0,
[2025-10-22 00:06:22]     "pilotErrorDiag": "",
[2025-10-22 00:06:22]  *** Listing of results directory ***
[2025-10-22 00:06:22] total 435328
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 16:52 pilot3.tar.gz
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 17:47 queuedata.json
[2025-10-22 00:06:22] -rwx------. 1 boincer umatlas     36292 Oct 20 17:48 runpilot2-wrapper.sh
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas       100 Oct 21 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 00:06:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 22:21 run_atlas
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas       105 Oct 21 22:21 job.xml
[2025-10-22 00:06:22] -rw-r--r--. 2 boincer umatlas 228507718 Oct 21 22:22 EVNT.46771634._002085.pool.root.1
[2025-10-22 00:06:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 22:22 start_atlas.sh
[2025-10-22 00:06:22] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 22:22 shared
[2025-10-22 00:06:22] -rw-r--r--. 2 boincer umatlas    569675 Oct 21 22:22 input.tar.gz
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas         0 Oct 21 22:22 boinc_lockfile
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas      2559 Oct 21 22:22 pandaJob.out
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas    978440 Oct 21 22:23 agis_schedconf.cvmfs.json
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas   1560740 Oct 21 22:23 agis_ddmendpoints.agis.ALL.json
[2025-10-22 00:06:22] drwx------. 5 boincer umatlas      4096 Oct 21 22:23 pilot3
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas      7164 Oct 22 00:03 init_data.xml
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas 210945088 Oct 22 00:03 HITS.46771637._052611.pool.root.1
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas       530 Oct 22 00:04 boinc_task_state.xml
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas      1062 Oct 22 00:04 memory_monitor_summary.json
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas    376734 Oct 22 00:04 log.46771637._052611.job.log.tgz.1
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas      7801 Oct 22 00:05 heartbeat.json
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas        95 Oct 22 00:06 pilot_heartbeat.json
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas      8192 Oct 22 00:06 boinc_mmap_file
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas        27 Oct 22 00:06 wrapper_checkpoint.txt
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas      4825 Oct 22 00:06 pilotlog.txt
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas    829426 Oct 22 00:06 log.46771637._052611.job.log.1
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas       357 Oct 22 00:06 output.list
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas       620 Oct 22 00:06 runtime_log
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas   1228800 Oct 22 00:06 result.tar.gz
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas      8695 Oct 22 00:06 runtime_log.err
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas       655 Oct 22 00:06 aUvKDmTvCV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVxdMDmr9uIZm.diag
[2025-10-22 00:06:22] -rw-r--r--. 1 boincer umatlas     22320 Oct 22 00:06 stderr.txt
[2025-10-22 00:06:22] HITS file was successfully produced:
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas 210945088 Oct 22 00:03 shared/HITS.pool.root.1
[2025-10-22 00:06:22]  *** Contents of shared directory: ***
[2025-10-22 00:06:22] total 430944
[2025-10-22 00:06:22] -rw-r--r--. 2 boincer umatlas 228507718 Oct 21 22:22 ATLAS.root_0
[2025-10-22 00:06:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 22:22 start_atlas.sh
[2025-10-22 00:06:22] -rw-r--r--. 2 boincer umatlas    569675 Oct 21 22:22 input.tar.gz
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas 210945088 Oct 22 00:03 HITS.pool.root.1
[2025-10-22 00:06:22] -rw-------. 1 boincer umatlas   1228800 Oct 22 00:06 result.tar.gz
00:06:24 (2909138): run_atlas exited; CPU time 27459.689635
00:06:24 (2909138): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN