Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-21 20:45:24 (15320): vboxwrapper version 26210
2025-10-21 20:45:24 (15320): BOINC client version: 8.0.4
2025-10-21 20:45:25 (15320): Detected: VirtualBox VboxManage Interface (Version: 7.0.24)
2025-10-21 20:45:25 (15320): Successfully copied 'init_data.xml' to the shared directory.
2025-10-21 20:45:25 (15320): Create VM. (boinc_7fd766c61466d440, slot#2)
2025-10-21 20:45:26 (15320): Setting Memory Size for VM. (4400MB)
2025-10-21 20:45:26 (15320): Setting CPU Count for VM. (4)
2025-10-21 20:45:26 (15320): Setting Chipset Options for VM.
2025-10-21 20:45:26 (15320): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-21 20:45:27 (15320): Setting Boot Options for VM.
2025-10-21 20:45:27 (15320): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-21 20:45:27 (15320): Enabling VM Network Access.
2025-10-21 20:45:28 (15320): Disabling USB Support for VM.
2025-10-21 20:45:28 (15320): Disabling COM Port Support for VM.
2025-10-21 20:45:28 (15320): Disabling LPT Port Support for VM.
2025-10-21 20:45:28 (15320): Disabling Audio Support for VM.
2025-10-21 20:45:29 (15320): Disabling Clipboard Support for VM.
2025-10-21 20:45:29 (15320): Disabling Drag and Drop Support for VM.
2025-10-21 20:45:29 (15320): Adding storage controller(s) to VM.
2025-10-21 20:45:29 (15320): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-21 20:45:30 (15320): Adding VirtualBox Guest Additions to VM.
2025-10-21 20:45:30 (15320): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-21 20:45:30 (15320): forwarding host port 54736 to guest port 80
2025-10-21 20:45:31 (15320): Enabling remote desktop for VM.
2025-10-21 20:45:31 (15320): Required extension pack not installed, remote desktop not enabled.
2025-10-21 20:45:31 (15320): Enabling shared directory for VM.
2025-10-21 20:45:31 (15320): Starting VM using VBoxManage interface. (boinc_7fd766c61466d440, slot#2)
2025-10-21 20:45:35 (15320): Successfully started VM. (PID = '13940')
2025-10-21 20:45:35 (15320): Reporting VM Process ID to BOINC.
2025-10-21 20:45:35 (15320): Guest Log: BIOS: VirtualBox 7.0.24
2025-10-21 20:45:35 (15320): Guest Log: CPUID EDX: 0x178bfbff
2025-10-21 20:45:35 (15320): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-21 20:45:35 (15320): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-21 20:45:35 (15320): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-21 20:45:35 (15320): Detected: Web Application Enabled (http://localhost:54736)
2025-10-21 20:45:35 (15320): Preference change detected
2025-10-21 20:45:35 (15320): Setting CPU throttle for VM. (100%)
2025-10-21 20:45:36 (15320): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-21 20:45:37 (15320): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-21 20:45:37 (15320): Guest Log: BIOS: Booting from Hard Disk...
2025-10-21 20:45:40 (15320): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-21 20:45:40 (15320): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-21 20:45:40 (15320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-21 20:45:44 (15320): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-21 20:45:44 (15320): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-21 20:45:49 (15320): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-21 20:45:49 (15320): Guest Log: 00:00:00.000074 main     Log opened 2025-10-21T20:45:47.661138000Z
2025-10-21 20:45:49 (15320): Guest Log: 00:00:00.000119 main     OS Product: Linux
2025-10-21 20:45:49 (15320): Guest Log: 00:00:00.000131 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-21 20:45:49 (15320): Guest Log: 00:00:00.000141 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-21 20:45:49 (15320): Guest Log: 00:00:00.000151 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-21 20:45:49 (15320): Guest Log: 00:00:00.000151 main     Process ID: 1303
2025-10-21 20:45:49 (15320): Guest Log: 00:00:00.000151 main     Package type: LINUX_64BITS_GENERIC
2025-10-21 20:45:49 (15320): Guest Log: 00:00:00.000549 main     5.2.32 r132073 started. Verbose level = 0
2025-10-21 20:45:49 (15320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-21 20:45:49 (15320): Guest Log: [INFO] Mounting shared directory
2025-10-21 20:45:50 (15320): Guest Log: [INFO] Checking for init_data.xml
2025-10-21 20:45:52 (15320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-21 20:45:52 (15320): Guest Log: [INFO] Detected branch: prod
2025-10-21 20:45:53 (15320): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-21 20:45:53 (15320): Guest Log: Copying input files
2025-10-21 20:45:53 (15320): Guest Log: Copied input files into RunAtlas.
2025-10-21 20:45:53 (15320): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-21 20:45:53 (15320): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-21 20:45:53 (15320): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-21 20:45:53 (15320): Guest Log: Further information can be found at the LHC@home message board.
2025-10-21 20:45:59 (15320): Guest Log: 00:00:10.019799 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 412 254 440 000ns (GuestNow=1 761 093 959 918 623 000 ns GuestLast=1 761 079 547 664 183 000 ns fSetTimeLastLoop=true )
2025-10-21 20:46:02 (15320): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-21 20:46:02 (15320): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-21 20:46:02 (15320): Guest Log: 2.6.3.0 1583 0 30184 151976 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-21 20:46:03 (15320): Guest Log: copied the webapp to /var/www
2025-10-21 20:46:03 (15320): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-21 20:46:03 (15320): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-21 20:46:03 (15320): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-21 20:46:03 (15320): Guest Log:  *** Starting ATLAS job. (PandaID=6853166393 taskID=46771637) ***
2025-10-21 22:25:40 (15320): Status Report: Elapsed Time: '6000.000000'
2025-10-21 22:25:40 (15320): Status Report: CPU Time: '14472.015625'
2025-10-22 00:05:44 (15320): Status Report: Elapsed Time: '12000.000000'
2025-10-22 00:05:44 (15320): Status Report: CPU Time: '29321.765625'
2025-10-22 01:40:20 (15320): Guest Log:  *** Job finished ***
2025-10-22 01:40:20 (15320): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:13,849 | INFO     | PID=5983 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:13,850 | INFO     | found 0 job(s) in 20 queues
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:13,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:13,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:13,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:13,851 | INFO     | [monitor] control thread has ended
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,434 | INFO     | all workflow threads have been joined
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,434 | INFO     | end of generic workflow (traces error code: 0)
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,435 | INFO     | traces error code: 0
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,546 [wrapper] ==== pilot stdout END ====
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,570 [wrapper] ==== wrapper stdout RESUME ====
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,589 [wrapper] pilotpid: 5983
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,616 [wrapper] Pilot exit status: 0
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,731 [wrapper] pandaids: 6853166393
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,863 [wrapper] cleanup supervisor_pilot 19897 5984
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,890 [wrapper] Test setup, not cleaning
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,912 [wrapper] apfmon messages muted
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,947 [wrapper] ==== wrapper stdout END ====
2025-10-22 01:40:20 (15320): Guest Log: 2025-10-22 05:40:18,967 [wrapper] ==== wrapper stderr END ====
2025-10-22 01:40:20 (15320): Guest Log:  *** Error codes and diagnostics ***
2025-10-22 01:40:20 (15320): Guest Log:     "exeErrorCode": 0,
2025-10-22 01:40:20 (15320): Guest Log:     "exeErrorDiag": "",
2025-10-22 01:40:20 (15320): Guest Log:     "pilotErrorCode": 0,
2025-10-22 01:40:20 (15320): Guest Log:     "pilotErrorDiag": "",
2025-10-22 01:40:20 (15320): Guest Log:  *** Listing of results directory ***
2025-10-22 01:40:20 (15320): Guest Log: total 214316
2025-10-22 01:40:20 (15320): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 21 19:32 pilot3.tar.gz
2025-10-22 01:40:20 (15320): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 21 19:59 queuedata.json
2025-10-22 01:40:20 (15320): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 21 20:00 runpilot2-wrapper.sh
2025-10-22 01:40:20 (15320): Guest Log: -rwxr-xr-x. 1 atlas atlas     15487 Oct 22 00:45 init_data.xml
2025-10-22 01:40:20 (15320): Guest Log: -rwxr-xr-x. 1 atlas atlas    569676 Oct 22 00:45 input.tar.gz
2025-10-22 01:40:20 (15320): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 22 00:45 start_atlas.sh
2025-10-22 01:40:20 (15320): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 00:45 EVNT.46771634._002931.pool.root.1 -> /data/./ATLAS.root_0
2025-10-22 01:40:20 (15320): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 22 00:46 pandaJob.out
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas    978456 Oct 22 00:46 agis_schedconf.cvmfs.json
2025-10-22 01:40:20 (15320): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 00:46 pilot3
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas 210223461 Oct 22 05:38 HITS.46771637._073711.pool.root.1
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas      1030 Oct 22 05:39 memory_monitor_summary.json
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 22 05:39 agis_ddmendpoints.agis.ALL.json
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas    422329 Oct 22 05:39 log.46771637._073711.job.log.tgz.1
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas      7817 Oct 22 05:39 heartbeat.json
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 05:40 pilot_heartbeat.json
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas      4991 Oct 22 05:40 pilotlog.txt
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas   2276353 Oct 22 05:40 log.46771637._073711.job.log.1
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 05:40 output.list
2025-10-22 01:40:20 (15320): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 05:40 runtime_log
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas   2713600 Oct 22 05:40 result.tar.gz
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas       649 Oct 22 05:40 YC8KDmdiXV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmOEgMDmG7F8lm.diag
2025-10-22 01:40:20 (15320): Guest Log: -rw-r--r--. 1 atlas atlas      8610 Oct 22 05:40 runtime_log.err
2025-10-22 01:40:20 (15320): Guest Log: Looking for outputfile HITS.46771637._073711.pool.root.1
2025-10-22 01:40:20 (15320): Guest Log: HITS file was successfully produced
2025-10-22 01:40:20 (15320): Guest Log: -rw-------. 1 atlas atlas 210223461 Oct 22 05:38 /home/atlas/RunAtlas/HITS.46771637._073711.pool.root.1
2025-10-22 01:40:21 (15320): Guest Log: Successfully finished the ATLAS job!
2025-10-22 01:40:21 (15320): Guest Log: Copying the results back to the shared directory!
2025-10-22 01:40:21 (15320): Guest Log:  *** Contents of shared directory: ***
2025-10-22 01:40:22 (15320): Guest Log: total 429280
2025-10-22 01:40:22 (15320): Guest Log: -rwxrwxrwx. 1 root root 226031287 Oct 22 00:45 ATLAS.root_0
2025-10-22 01:40:22 (15320): Guest Log: -rwxrwxrwx. 1 root root 210223461 Oct 22 05:40 HITS.pool.root.1
2025-10-22 01:40:22 (15320): Guest Log: -rwxrwxrwx. 1 root root     15487 Oct 22 00:45 init_data.xml
2025-10-22 01:40:22 (15320): Guest Log: -rwxrwxrwx. 1 root root    569676 Oct 22 00:45 input.tar.gz
2025-10-22 01:40:22 (15320): Guest Log: -rwxrwxrwx. 1 root root   2713600 Oct 22 05:40 result.tar.gz
2025-10-22 01:40:22 (15320): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 22 00:45 start_atlas.sh
2025-10-22 01:40:22 (15320): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-22 01:40:22 (15320): VM Completion File Detected.
2025-10-22 01:40:22 (15320): Powering off VM.
2025-10-22 01:40:22 (15320): Successfully stopped VM.
2025-10-22 01:40:22 (15320): Deregistering VM. (boinc_7fd766c61466d440, slot#2)
2025-10-22 01:40:22 (15320): Removing network bandwidth throttle group from VM.
2025-10-22 01:40:22 (15320): Removing VM from VirtualBox.
2025-10-22 01:40:28 (15320): called boinc_finish(0)

</stderr_txt>
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