Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:46:11 (16436): wrapper (7.7.26015): starting
20:46:11 (16436): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 20:46:11] Arguments: --nthreads 8
[2025-10-21 20:46:11] Threads: 8
[2025-10-21 20:46:11] Checking for CVMFS
[2025-10-21 20:46:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 20:46:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 20:46:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 20:46:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 20:46:11] 2.11.2.0 3026 27508 79372 151976 2 59 13893264 20275200 1 130560 0 15511783 99.981 1226610 37039 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-21 20:46:11] CVMFS is ok
[2025-10-21 20:46:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 20:46:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 20:46:11] Further information can be found at the LHC@home message board.
[2025-10-21 20:46:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 20:46:11] Checking for apptainer binary...
[2025-10-21 20:46:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 20:46:11] Running /usr/bin/apptainer --version
[2025-10-21 20:46:11] apptainer version 1.3.2-1.el7
[2025-10-21 20:46:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 20:46:13] c-204-25.aglt2.org
[2025-10-21 20:46:13] apptainer works
[2025-10-21 20:46:13] Set ATHENA_PROC_NUMBER=8
[2025-10-21 20:46:13] Set ATHENA_CORE_NUMBER=8
[2025-10-21 20:46:13] Starting ATLAS job with PandaID=6853166403
[2025-10-21 20:46:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 23:08:51]  *** The last 200 lines of the pilot log: ***
[2025-10-21 23:08:51] 2025-10-22 03:07:51,507 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 23:08:51] 2025-10-22 03:07:51,507 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 23:08:51] 2025-10-22 03:07:51,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 23:08:51] 2025-10-22 03:07:51,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 23:08:51] 2025-10-22 03:07:51,510 | INFO     | fitting pss+swap vs Time
[2025-10-21 23:08:51] 2025-10-22 03:07:51,511 | INFO     | sum of square deviations: 832722590.0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,512 | INFO     | sum of deviations: -10138933402.999998
[2025-10-21 23:08:51] 2025-10-22 03:07:51,512 | INFO     | mean x: 1761098232.0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,512 | INFO     | mean y: 2515694.2805755395
[2025-10-21 23:08:51] 2025-10-22 03:07:51,512 | INFO     | -- intersect: 21445019962.58563
[2025-10-21 23:08:51] 2025-10-22 03:07:51,512 | INFO     | intersect: 21445019962.58563
[2025-10-21 23:08:51] 2025-10-22 03:07:51,512 | INFO     | chi2: 2.3714276577771387
[2025-10-21 23:08:51] 2025-10-22 03:07:51,513 | INFO     | sum of square deviations: 746051197.5
[2025-10-21 23:08:51] 2025-10-22 03:07:51,513 | INFO     | sum of deviations: -519944357.9999947
[2025-10-21 23:08:51] 2025-10-22 03:07:51,513 | INFO     | mean x: 1761098079.5
[2025-10-21 23:08:51] 2025-10-22 03:07:51,514 | INFO     | mean y: 2532149.104477612
[2025-10-21 23:08:51] 2025-10-22 03:07:51,514 | INFO     | -- intersect: 1229891629.7795973
[2025-10-21 23:08:51] 2025-10-22 03:07:51,514 | INFO     | intersect: 1229891629.7795973
[2025-10-21 23:08:51] 2025-10-22 03:07:51,514 | INFO     | chi2: 1.6130299279011115
[2025-10-21 23:08:51] 2025-10-22 03:07:51,514 | INFO     | current chi2=1.6130299279011115 (change=31.98063948477823 %)
[2025-10-21 23:08:51] 2025-10-22 03:07:51,514 | INFO     | sum of square deviations: 665612480.0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,515 | INFO     | sum of deviations: -253745970.00000513
[2025-10-21 23:08:51] 2025-10-22 03:07:51,515 | INFO     | mean x: 1761097927.0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,515 | INFO     | mean y: 2532653.968992248
[2025-10-21 23:08:51] 2025-10-22 03:07:51,515 | INFO     | -- intersect: 673901528.7707586
[2025-10-21 23:08:51] 2025-10-22 03:07:51,516 | INFO     | intersect: 673901528.7707586
[2025-10-21 23:08:51] 2025-10-22 03:07:51,516 | INFO     | chi2: 1.6138973005826542
[2025-10-21 23:08:51] 2025-10-22 03:07:51,516 | INFO     | current chi2=1.6138973005826542 (change=-0.05377288211083109 %)
[2025-10-21 23:08:51] 2025-10-22 03:07:51,516 | INFO     | right removable region: 128
[2025-10-21 23:08:51] 2025-10-22 03:07:51,516 | INFO     | sum of square deviations: 746051197.5
[2025-10-21 23:08:51] 2025-10-22 03:07:51,517 | INFO     | sum of deviations: -30650134176.000008
[2025-10-21 23:08:51] 2025-10-22 03:07:51,517 | INFO     | mean x: 1761098384.5
[2025-10-21 23:08:51] 2025-10-22 03:07:51,517 | INFO     | mean y: 2551173.552238806
[2025-10-21 23:08:51] 2025-10-22 03:07:51,517 | INFO     | -- intersect: 72354022443.80894
[2025-10-21 23:08:51] 2025-10-22 03:07:51,517 | INFO     | intersect: 72354022443.80894
[2025-10-21 23:08:51] 2025-10-22 03:07:51,518 | INFO     | chi2: 0.9367663660275264
[2025-10-21 23:08:51] 2025-10-22 03:07:51,518 | INFO     | current chi2=0.9367663660275264 (change=60.497788623010074 %)
[2025-10-21 23:08:51] 2025-10-22 03:07:51,518 | INFO     | sum of square deviations: 665612480.0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,519 | INFO     | sum of deviations: -28881240926.000004
[2025-10-21 23:08:51] 2025-10-22 03:07:51,519 | INFO     | mean x: 1761098537.0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,519 | INFO     | mean y: 2547731.891472868
[2025-10-21 23:08:51] 2025-10-22 03:07:51,519 | INFO     | -- intersect: 76417447797.35168
[2025-10-21 23:08:51] 2025-10-22 03:07:51,519 | INFO     | intersect: 76417447797.35168
[2025-10-21 23:08:51] 2025-10-22 03:07:51,519 | INFO     | chi2: 0.9262206482572823
[2025-10-21 23:08:51] 2025-10-22 03:07:51,520 | INFO     | current chi2=0.9262206482572823 (change=1.1257575157148805 %)
[2025-10-21 23:08:51] 2025-10-22 03:07:51,520 | INFO     | left removable region: 20
[2025-10-21 23:08:51] 2025-10-22 03:07:51,520 | INFO     | sum of square deviations: 390582207.0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,520 | INFO     | sum of deviations: -10697611571.499998
[2025-10-21 23:08:51] 2025-10-22 03:07:51,521 | INFO     | mean x: 1761098506.5
[2025-10-21 23:08:51] 2025-10-22 03:07:51,521 | INFO     | mean y: 2549794.824074074
[2025-10-21 23:08:51] 2025-10-22 03:07:51,521 | INFO     | -- intersect: 48237076160.9618
[2025-10-21 23:08:51] 2025-10-22 03:07:51,521 | INFO     | intersect: 48237076160.9618
[2025-10-21 23:08:51] 2025-10-22 03:07:51,521 | INFO     | chi2: 0.10775446978235352
[2025-10-21 23:08:51] 2025-10-22 03:07:51,521 | INFO     | -- intersect: 48237076160.9618
[2025-10-21 23:08:51] 2025-10-22 03:07:51,521 | INFO     | current memory leak: -27.39 B/s (using 108 data points, chi2=0.11)
[2025-10-21 23:08:51] 2025-10-22 03:07:51,522 | INFO     | could have reported an average CPU frequency of 2018 MHz (8 samples)
[2025-10-21 23:08:51] 2025-10-22 03:07:51,522 | INFO     | ..............................
[2025-10-21 23:08:51] 2025-10-22 03:07:51,522 | INFO     | . Timing measurements:
[2025-10-21 23:08:51] 2025-10-22 03:07:51,522 | INFO     | . get job = 0 s
[2025-10-21 23:08:51] 2025-10-22 03:07:51,522 | INFO     | . initial setup = 2 s
[2025-10-21 23:08:51] 2025-10-22 03:07:51,522 | INFO     | . payload setup = 8 s
[2025-10-21 23:08:51] 2025-10-22 03:07:51,523 | INFO     | . stage-in = 0 s
[2025-10-21 23:08:51] 2025-10-22 03:07:51,523 | INFO     | . payload execution = 8439 s
[2025-10-21 23:08:51] 2025-10-22 03:07:51,523 | INFO     | . stage-out = 0 s
[2025-10-21 23:08:51] 2025-10-22 03:07:51,523 | INFO     | . log creation = 0 s
[2025-10-21 23:08:51] 2025-10-22 03:07:51,523 | INFO     | ..............................
[2025-10-21 23:08:51] 2025-10-22 03:07:51,615 | INFO     | 
[2025-10-21 23:08:51] 2025-10-22 03:07:51,616 | INFO     | job summary report
[2025-10-21 23:08:51] 2025-10-22 03:07:51,616 | INFO     | --------------------------------------------------
[2025-10-21 23:08:51] 2025-10-22 03:07:51,616 | INFO     | PanDA job id: 6853166403
[2025-10-21 23:08:51] 2025-10-22 03:07:51,616 | INFO     | task id: 46771637
[2025-10-21 23:08:51] 2025-10-22 03:07:51,616 | INFO     | errors: (none)
[2025-10-21 23:08:51] 2025-10-22 03:07:51,617 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 23:08:51] 2025-10-22 03:07:51,617 | INFO     | pilot state: finished 
[2025-10-21 23:08:51] 2025-10-22 03:07:51,617 | INFO     | transexitcode: 0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,617 | INFO     | exeerrorcode: 0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,617 | INFO     | exeerrordiag: 
[2025-10-21 23:08:51] 2025-10-22 03:07:51,617 | INFO     | exitcode: 0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,618 | INFO     | exitmsg: OK
[2025-10-21 23:08:51] 2025-10-22 03:07:51,618 | INFO     | cpuconsumptiontime: 63322 s
[2025-10-21 23:08:51] 2025-10-22 03:07:51,618 | INFO     | nevents: 400
[2025-10-21 23:08:51] 2025-10-22 03:07:51,618 | INFO     | neventsw: 0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,618 | INFO     | pid: 26507
[2025-10-21 23:08:51] 2025-10-22 03:07:51,618 | INFO     | pgrp: 26507
[2025-10-21 23:08:51] 2025-10-22 03:07:51,619 | INFO     | corecount: 8
[2025-10-21 23:08:51] 2025-10-22 03:07:51,619 | INFO     | event service: False
[2025-10-21 23:08:51] 2025-10-22 03:07:51,619 | INFO     | sizes: {0: 2348931, 6: 2349193, 11: 2349221, 8451: 2377075, 8453: 2386073, 8455: 2386129, 8463: 2386451}
[2025-10-21 23:08:51] 2025-10-22 03:07:51,619 | INFO     | --------------------------------------------------
[2025-10-21 23:08:51] 2025-10-22 03:07:51,619 | INFO     | 
[2025-10-21 23:08:51] 2025-10-22 03:07:51,619 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 23:08:51] 2025-10-22 03:07:51,648 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,648 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,649 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,649 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,652 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 23:08:51] 2025-10-22 03:07:51,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 23:08:51] 2025-10-22 03:07:51,652 | INFO     | job 6853166403 has completed (purged errors)
[2025-10-21 23:08:51] 2025-10-22 03:07:51,653 | INFO     | overall cleanup function is called
[2025-10-21 23:08:51] 2025-10-22 03:07:52,660 | INFO     | --- collectZombieJob: --- 10, [26507]
[2025-10-21 23:08:51] 2025-10-22 03:07:52,660 | INFO     | zombie collector waiting for pid 26507
[2025-10-21 23:08:51] 2025-10-22 03:07:52,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 23:08:51] 2025-10-22 03:07:52,661 | INFO     | collected zombie processes
[2025-10-21 23:08:51] 2025-10-22 03:07:52,661 | INFO     | will attempt to kill all subprocesses of pid=26507
[2025-10-21 23:08:51] 2025-10-22 03:07:52,752 | INFO     | process IDs to be killed: [26507] (in reverse order)
[2025-10-21 23:08:51] 2025-10-22 03:07:52,810 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 23:08:51] 2025-10-22 03:07:52,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 23:08:51] 2025-10-22 03:07:52,817 | INFO     | did not find any defunct processes belonging to 26507
[2025-10-21 23:08:51] 2025-10-22 03:07:52,821 | INFO     | did not find any defunct processes belonging to 26507
[2025-10-21 23:08:51] 2025-10-22 03:07:52,822 | INFO     | ready for new job
[2025-10-21 23:08:51] 2025-10-22 03:07:52,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 23:08:51] 2025-10-22 03:07:52,825 | INFO     | ***************************************
[2025-10-21 23:08:51] 2025-10-22 03:07:52,825 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 23:08:51] 2025-10-22 03:07:52,825 | INFO     | ***************************************
[2025-10-21 23:08:51] 2025-10-22 03:07:52,825 | INFO     | 
[2025-10-21 23:08:51] 2025-10-22 03:07:52,826 | INFO     | architecture information:
[2025-10-21 23:08:51] 2025-10-22 03:07:52,827 | INFO     | executing command: cat /etc/os-release
[2025-10-21 23:08:51] 2025-10-22 03:07:52,845 | INFO     | cat /etc/os-release:
[2025-10-21 23:08:51] NAME="CentOS Linux"
[2025-10-21 23:08:51] VERSION="7 (Core)"
[2025-10-21 23:08:51] ID="centos"
[2025-10-21 23:08:51] ID_LIKE="rhel fedora"
[2025-10-21 23:08:51] VERSION_ID="7"
[2025-10-21 23:08:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 23:08:51] ANSI_COLOR="0;31"
[2025-10-21 23:08:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 23:08:51] HOME_URL="https://www.centos.org/"
[2025-10-21 23:08:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 23:08:51] 
[2025-10-21 23:08:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 23:08:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 23:08:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 23:08:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 23:08:51] 
[2025-10-21 23:08:51] 2025-10-22 03:07:52,845 | INFO     | ***************************************
[2025-10-21 23:08:51] 2025-10-22 03:07:53,348 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 23:08:51] 2025-10-22 03:07:53,368 | INFO     | sufficient remaining disk space (18525192192 B)
[2025-10-21 23:08:51] 2025-10-22 03:07:53,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 23:08:51] 2025-10-22 03:07:53,369 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 23:08:51] 2025-10-22 03:07:53,369 | INFO     | update_server=False
[2025-10-21 23:08:51] 2025-10-22 03:07:53,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 23:08:51] 2025-10-22 03:07:53,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 23:08:51] 2025-10-22 03:07:53,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 23:08:51] 2025-10-22 03:07:53,371 | INFO     | aborting loop
[2025-10-21 23:08:51] 2025-10-22 03:07:53,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 23:08:51] 2025-10-22 03:07:53,659 | INFO     | all data control threads have been joined
[2025-10-21 23:08:51] 2025-10-22 03:07:53,747 | INFO     | all payload control threads have been joined
[2025-10-21 23:08:51] 2025-10-22 03:07:54,121 | INFO     | all job control threads have been joined
[2025-10-21 23:08:51] 2025-10-22 03:07:54,372 | INFO     | [job] queue monitor thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:54,374 | INFO     | [job] retrieve thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:54,376 | INFO     | [job] job monitor thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:54,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:54,660 | INFO     | [payload] failed_post thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:54,661 | INFO     | [data] control thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:54,751 | INFO     | [payload] control thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:54,914 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 23:08:51] 2025-10-22 03:07:55,126 | INFO     | [job] control thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:55,178 | INFO     | [job] validate thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:55,339 | INFO     | [payload] validate_post thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:55,377 | INFO     | [data] copytool_out thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:55,473 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:55,483 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:55,485 | INFO     | [data] copytool_in thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:55,842 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:07:58,916 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 23:08:51] 2025-10-22 03:08:23,755 | INFO     | PID=20122 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 23:08:51] 2025-10-22 03:08:23,755 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 23:08:51] 2025-10-22 03:08:23,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 23:08:51] 2025-10-22 03:08:23,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 23:08:51] 2025-10-22 03:08:44,587 | INFO     | [monitor] cgroup control has ended
[2025-10-21 23:08:51] 2025-10-22 03:08:46,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293338785600)>', '<ExcThread(monitor, started 140292011321088)>']
[2025-10-21 23:08:51] 2025-10-22 03:08:46,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 23:08:51] 2025-10-22 03:08:46,860 | INFO     | [monitor] control thread has ended
[2025-10-21 23:08:51] 2025-10-22 03:08:51,594 | INFO     | all workflow threads have been joined
[2025-10-21 23:08:51] 2025-10-22 03:08:51,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 23:08:51] 2025-10-22 03:08:51,595 | INFO     | traces error code: 0
[2025-10-21 23:08:51] 2025-10-22 03:08:51,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 23:08:51] 2025-10-22 03:08:51,718 [wrapper] ==== pilot stdout END ====
[2025-10-21 23:08:51] 2025-10-22 03:08:51,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 23:08:51] 2025-10-22 03:08:51,727 [wrapper] pilotpid: 20122
[2025-10-21 23:08:51] 2025-10-22 03:08:51,731 [wrapper] Pilot exit status: 0
[2025-10-21 23:08:51] 2025-10-22 03:08:51,746 [wrapper] pandaids: 6853166403
[2025-10-21 23:08:51] 2025-10-22 03:08:51,794 [wrapper] cleanup supervisor_pilot 10319 20123
[2025-10-21 23:08:51] 2025-10-22 03:08:51,799 [wrapper] Test setup, not cleaning
[2025-10-21 23:08:51] 2025-10-22 03:08:51,803 [wrapper] apfmon messages muted
[2025-10-21 23:08:51] 2025-10-22 03:08:51,808 [wrapper] ==== wrapper stdout END ====
[2025-10-21 23:08:51] 2025-10-22 03:08:51,812 [wrapper] ==== wrapper stderr END ====
[2025-10-21 23:08:51]  *** Error codes and diagnostics ***
[2025-10-21 23:08:51]     "exeErrorCode": 0,
[2025-10-21 23:08:51]     "exeErrorDiag": "",
[2025-10-21 23:08:51]     "pilotErrorCode": 0,
[2025-10-21 23:08:51]     "pilotErrorDiag": "",
[2025-10-21 23:08:51]  *** Listing of results directory ***
[2025-10-21 23:08:51] total 433272
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas    557409 Oct 21 15:32 pilot3.tar.gz
[2025-10-21 23:08:51] -rwx------ 1 boincer umatlas     36292 Oct 21 16:02 runpilot2-wrapper.sh
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas      5112 Oct 21 16:03 queuedata.json
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas       100 Oct 21 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 23:08:51] -rwxr-xr-x 1 boincer umatlas      7986 Oct 21 20:46 run_atlas
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas       105 Oct 21 20:46 job.xml
[2025-10-21 23:08:51] -rw-r--r-- 2 boincer umatlas 226031287 Oct 21 20:46 EVNT.46771634._002931.pool.root.1
[2025-10-21 23:08:51] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 20:46 start_atlas.sh
[2025-10-21 23:08:51] drwxrwx--x 2 boincer umatlas      4096 Oct 21 20:46 shared
[2025-10-21 23:08:51] -rw-r--r-- 2 boincer umatlas    569682 Oct 21 20:46 input.tar.gz
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas         0 Oct 21 20:46 boinc_lockfile
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas      2560 Oct 21 20:46 pandaJob.out
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas    978456 Oct 21 20:46 agis_schedconf.cvmfs.json
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas   1560740 Oct 21 20:46 agis_ddmendpoints.agis.ALL.json
[2025-10-21 23:08:51] drwx------ 5 boincer umatlas      4096 Oct 21 20:46 pilot3
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas      5910 Oct 21 23:03 init_data.xml
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas 210596526 Oct 21 23:07 HITS.46771637._073721.pool.root.1
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas       529 Oct 21 23:07 boinc_task_state.xml
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas        95 Oct 21 23:07 pilot_heartbeat.json
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas      1064 Oct 21 23:07 memory_monitor_summary.json
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas    382062 Oct 21 23:07 log.46771637._073721.job.log.tgz.1
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas      7853 Oct 21 23:07 heartbeat.json
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas      8192 Oct 21 23:08 boinc_mmap_file
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas        27 Oct 21 23:08 wrapper_checkpoint.txt
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas      4746 Oct 21 23:08 pilotlog.txt
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas   1185512 Oct 21 23:08 log.46771637._073721.job.log.1
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas       357 Oct 21 23:08 output.list
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas       620 Oct 21 23:08 runtime_log
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas   1587200 Oct 21 23:08 result.tar.gz
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas      8703 Oct 21 23:08 runtime_log.err
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas       660 Oct 21 23:08 MjiKDmXkXV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWEgMDmB0RrRn.diag
[2025-10-21 23:08:51] -rw-r--r-- 1 boincer umatlas     20864 Oct 21 23:08 stderr.txt
[2025-10-21 23:08:51] HITS file was successfully produced:
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas 210596526 Oct 21 23:07 shared/HITS.pool.root.1
[2025-10-21 23:08:51]  *** Contents of shared directory: ***
[2025-10-21 23:08:51] total 428532
[2025-10-21 23:08:51] -rw-r--r-- 2 boincer umatlas 226031287 Oct 21 20:46 ATLAS.root_0
[2025-10-21 23:08:51] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 20:46 start_atlas.sh
[2025-10-21 23:08:51] -rw-r--r-- 2 boincer umatlas    569682 Oct 21 20:46 input.tar.gz
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas 210596526 Oct 21 23:07 HITS.pool.root.1
[2025-10-21 23:08:51] -rw------- 1 boincer umatlas   1587200 Oct 21 23:08 result.tar.gz
23:08:53 (16436): run_atlas exited; CPU time 63252.894994
23:08:53 (16436): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN