Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:02:31 (10791): wrapper (7.7.26015): starting
13:02:31 (10791): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 13:02:31] Arguments: --nthreads 8
[2025-10-22 13:02:31] Threads: 8
[2025-10-22 13:02:31] Checking for CVMFS
[2025-10-22 13:02:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 13:02:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 13:02:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 13:02:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 13:02:34] 2.11.2.0 5394 234744 140192 151992 0 61 23263173 25165825 4632 130560 0 134887501 99.896 68739083 3288 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-22 13:02:34] CVMFS is ok
[2025-10-22 13:02:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 13:02:34] Checking for apptainer binary...
[2025-10-22 13:02:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 13:02:34] Running /usr/bin/apptainer --version
[2025-10-22 13:02:34] apptainer version 1.3.2-1.el7
[2025-10-22 13:02:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 13:02:46] cg-vwn500.simple-grid.lan
[2025-10-22 13:02:46] apptainer works
[2025-10-22 13:02:46] Set ATHENA_PROC_NUMBER=8
[2025-10-22 13:02:46] Set ATHENA_CORE_NUMBER=8
[2025-10-22 13:02:46] Starting ATLAS job with PandaID=6853167241
[2025-10-22 13:02:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 17:20:18]  *** The last 200 lines of the pilot log: ***
[2025-10-22 17:20:18] 2025-10-22 15:19:21,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 17:20:18] 2025-10-22 15:19:22,952 | INFO     | time since job start (15162s) is within the limit (172800.0s)
[2025-10-22 17:20:18] 2025-10-22 15:19:24,161 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-22 17:20:18] 2025-10-22 15:19:24,162 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-10-22 17:20:18] 2025-10-22 15:19:24,164 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6853167241/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 17:20:18] 2025-10-22 15:19:24,165 | INFO     | extracted standard info from prmon json
[2025-10-22 17:20:18] 2025-10-22 15:19:24,165 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 17:20:18] 2025-10-22 15:19:24,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 17:20:18] 2025-10-22 15:19:24,165 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 17:20:18] 2025-10-22 15:19:24,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 17:20:18] 2025-10-22 15:19:24,170 | INFO     | fitting pss+swap vs Time
[2025-10-22 17:20:18] 2025-10-22 15:19:24,171 | INFO     | sum of square deviations: 4286517580.0
[2025-10-22 17:20:18] 2025-10-22 15:19:24,172 | INFO     | sum of deviations: 5091134359.000002
[2025-10-22 17:20:18] 2025-10-22 15:19:24,173 | INFO     | mean x: 1761138955.5
[2025-10-22 17:20:18] 2025-10-22 15:19:24,173 | INFO     | mean y: 2510546.2583333333
[2025-10-22 17:20:18] 2025-10-22 15:19:24,173 | INFO     | -- intersect: -2089209569.1924527
[2025-10-22 17:20:18] 2025-10-22 15:19:24,173 | INFO     | intersect: -2089209569.1924527
[2025-10-22 17:20:18] 2025-10-22 15:19:24,173 | INFO     | chi2: 5.047344436045632
[2025-10-22 17:20:18] 2025-10-22 15:19:24,174 | INFO     | sum of square deviations: 4024149870.0
[2025-10-22 17:20:18] 2025-10-22 15:19:24,176 | INFO     | sum of deviations: 21166551284.000004
[2025-10-22 17:20:18] 2025-10-22 15:19:24,176 | INFO     | mean x: 1761138803.0
[2025-10-22 17:20:18] 2025-10-22 15:19:24,176 | INFO     | mean y: 2519734.4468085105
[2025-10-22 17:20:18] 2025-10-22 15:19:24,176 | INFO     | -- intersect: -9260861599.793081
[2025-10-22 17:20:18] 2025-10-22 15:19:24,176 | INFO     | intersect: -9260861599.793081
[2025-10-22 17:20:18] 2025-10-22 15:19:24,177 | INFO     | chi2: 4.316451102847572
[2025-10-22 17:20:18] 2025-10-22 15:19:24,177 | INFO     | current chi2=4.316451102847572 (change=14.480750074799381 %)
[2025-10-22 17:20:18] 2025-10-22 15:19:24,177 | INFO     | right removable region: 234
[2025-10-22 17:20:18] 2025-10-22 15:19:24,177 | INFO     | sum of square deviations: 4024149870.0
[2025-10-22 17:20:18] 2025-10-22 15:19:24,179 | INFO     | sum of deviations: -70608995232.0
[2025-10-22 17:20:18] 2025-10-22 15:19:24,179 | INFO     | mean x: 1761139108.0
[2025-10-22 17:20:18] 2025-10-22 15:19:24,179 | INFO     | mean y: 2554458.5234042555
[2025-10-22 17:20:18] 2025-10-22 15:19:24,179 | INFO     | -- intersect: 30904053382.980892
[2025-10-22 17:20:18] 2025-10-22 15:19:24,180 | INFO     | intersect: 30904053382.980892
[2025-10-22 17:20:18] 2025-10-22 15:19:24,180 | INFO     | chi2: 1.2575992527424815
[2025-10-22 17:20:18] 2025-10-22 15:19:24,180 | INFO     | current chi2=1.2575992527424815 (change=75.08394228534651 %)
[2025-10-22 17:20:18] 2025-10-22 15:19:24,180 | INFO     | sum of square deviations: 3772712597.5
[2025-10-22 17:20:18] 2025-10-22 15:19:24,182 | INFO     | sum of deviations: -84980733244.5
[2025-10-22 17:20:18] 2025-10-22 15:19:24,182 | INFO     | mean x: 1761139260.5
[2025-10-22 17:20:18] 2025-10-22 15:19:24,182 | INFO     | mean y: 2563107.4652173915
[2025-10-22 17:20:18] 2025-10-22 15:19:24,183 | INFO     | -- intersect: 39672403264.953255
[2025-10-22 17:20:18] 2025-10-22 15:19:24,183 | INFO     | intersect: 39672403264.953255
[2025-10-22 17:20:18] 2025-10-22 15:19:24,183 | INFO     | chi2: 1.0090879487387512
[2025-10-22 17:20:18] 2025-10-22 15:19:24,183 | INFO     | current chi2=1.0090879487387512 (change=19.760770647866945 %)
[2025-10-22 17:20:18] 2025-10-22 15:19:24,183 | INFO     | left removable region: 20
[2025-10-22 17:20:18] 2025-10-22 15:19:24,184 | INFO     | sum of square deviations: 3038856977.5
[2025-10-22 17:20:18] 2025-10-22 15:19:24,185 | INFO     | sum of deviations: -56664206223.5
[2025-10-22 17:20:18] 2025-10-22 15:19:24,185 | INFO     | mean x: 1761139382.5
[2025-10-22 17:20:18] 2025-10-22 15:19:24,186 | INFO     | mean y: 2566790.9392523365
[2025-10-22 17:20:18] 2025-10-22 15:19:24,186 | INFO     | -- intersect: 32841744777.000774
[2025-10-22 17:20:18] 2025-10-22 15:19:24,186 | INFO     | intersect: 32841744777.000774
[2025-10-22 17:20:18] 2025-10-22 15:19:24,186 | INFO     | chi2: 0.21734897480087498
[2025-10-22 17:20:18] 2025-10-22 15:19:24,186 | INFO     | -- intersect: 32841744777.000774
[2025-10-22 17:20:18] 2025-10-22 15:19:24,186 | INFO     | current memory leak: -18.65 B/s (using 214 data points, chi2=0.22)
[2025-10-22 17:20:18] 2025-10-22 15:19:24,187 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-10-22 17:20:18] 2025-10-22 15:19:24,187 | INFO     | ..............................
[2025-10-22 17:20:18] 2025-10-22 15:19:24,187 | INFO     | . Timing measurements:
[2025-10-22 17:20:18] 2025-10-22 15:19:24,188 | INFO     | . get job = 0 s
[2025-10-22 17:20:18] 2025-10-22 15:19:24,188 | INFO     | . initial setup = 7 s
[2025-10-22 17:20:18] 2025-10-22 15:19:24,188 | INFO     | . payload setup = 127 s
[2025-10-22 17:20:18] 2025-10-22 15:19:24,188 | INFO     | . stage-in = 0 s
[2025-10-22 17:20:18] 2025-10-22 15:19:24,188 | INFO     | . payload execution = 14738 s
[2025-10-22 17:20:18] 2025-10-22 15:19:24,188 | INFO     | . stage-out = 3 s
[2025-10-22 17:20:18] 2025-10-22 15:19:24,188 | INFO     | . log creation = 1 s
[2025-10-22 17:20:18] 2025-10-22 15:19:24,188 | INFO     | ..............................
[2025-10-22 17:20:18] 2025-10-22 15:19:24,325 | INFO     | 
[2025-10-22 17:20:18] 2025-10-22 15:19:24,325 | INFO     | job summary report
[2025-10-22 17:20:18] 2025-10-22 15:19:24,325 | INFO     | --------------------------------------------------
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | PanDA job id: 6853167241
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | task id: 46771637
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | errors: (none)
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | pilot state: finished 
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | transexitcode: 0
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | exeerrorcode: 0
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | exeerrordiag: 
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | exitcode: 0
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | exitmsg: OK
[2025-10-22 17:20:18] 2025-10-22 15:19:24,326 | INFO     | cpuconsumptiontime: 56185 s
[2025-10-22 17:20:18] 2025-10-22 15:19:24,327 | INFO     | nevents: 400
[2025-10-22 17:20:18] 2025-10-22 15:19:24,327 | INFO     | neventsw: 0
[2025-10-22 17:20:18] 2025-10-22 15:19:24,327 | INFO     | pid: 21084
[2025-10-22 17:20:18] 2025-10-22 15:19:24,327 | INFO     | pgrp: 21084
[2025-10-22 17:20:18] 2025-10-22 15:19:24,327 | INFO     | corecount: 8
[2025-10-22 17:20:18] 2025-10-22 15:19:24,327 | INFO     | event service: False
[2025-10-22 17:20:18] 2025-10-22 15:19:24,327 | INFO     | sizes: {0: 2348704, 1: 2348959, 2: 2348959, 12: 2348987, 23: 2349015, 34: 2349043, 44: 2349199, 55: 2349227, 66: 2349255, 77: 2349283, 87: 2349339, 89: 2349909, 98
[2025-10-22 17:20:18] 2025-10-22 15:19:24,327 | INFO     | --------------------------------------------------
[2025-10-22 17:20:18] 2025-10-22 15:19:24,327 | INFO     | 
[2025-10-22 17:20:18] 2025-10-22 15:19:24,327 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-22 17:20:18] 2025-10-22 15:19:24,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,844 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,844 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 17:20:18] 2025-10-22 15:19:24,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 17:20:18] 2025-10-22 15:19:24,846 | INFO     | job 6853167241 has completed (purged errors)
[2025-10-22 17:20:18] 2025-10-22 15:19:24,846 | INFO     | overall cleanup function is called
[2025-10-22 17:20:18] 2025-10-22 15:19:25,855 | INFO     | --- collectZombieJob: --- 10, [21084]
[2025-10-22 17:20:18] 2025-10-22 15:19:25,856 | INFO     | zombie collector waiting for pid 21084
[2025-10-22 17:20:18] 2025-10-22 15:19:25,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 17:20:18] 2025-10-22 15:19:25,856 | INFO     | collected zombie processes
[2025-10-22 17:20:18] 2025-10-22 15:19:25,856 | INFO     | will attempt to kill all subprocesses of pid=21084
[2025-10-22 17:20:18] 2025-10-22 15:19:25,955 | INFO     | process IDs to be killed: [21084] (in reverse order)
[2025-10-22 17:20:18] 2025-10-22 15:19:26,715 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 17:20:18] 2025-10-22 15:19:26,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 17:20:18] 2025-10-22 15:19:26,719 | INFO     | did not find any defunct processes belonging to 21084
[2025-10-22 17:20:18] 2025-10-22 15:19:26,722 | INFO     | did not find any defunct processes belonging to 21084
[2025-10-22 17:20:18] 2025-10-22 15:19:26,722 | INFO     | ready for new job
[2025-10-22 17:20:18] 2025-10-22 15:19:26,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 17:20:18] 2025-10-22 15:19:26,725 | INFO     | ***************************************
[2025-10-22 17:20:18] 2025-10-22 15:19:26,725 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 17:20:18] 2025-10-22 15:19:26,725 | INFO     | ***************************************
[2025-10-22 17:20:18] 2025-10-22 15:19:26,725 | INFO     | 
[2025-10-22 17:20:18] 2025-10-22 15:19:26,726 | INFO     | pilot is running in a VM
[2025-10-22 17:20:18] 2025-10-22 15:19:26,726 | INFO     | architecture information:
[2025-10-22 17:20:18] 2025-10-22 15:19:26,726 | INFO     | executing command: cat /etc/os-release
[2025-10-22 17:20:18] 2025-10-22 15:19:27,013 | INFO     | cat /etc/os-release:
[2025-10-22 17:20:18] NAME="CentOS Linux"
[2025-10-22 17:20:18] VERSION="7 (Core)"
[2025-10-22 17:20:18] ID="centos"
[2025-10-22 17:20:18] ID_LIKE="rhel fedora"
[2025-10-22 17:20:18] VERSION_ID="7"
[2025-10-22 17:20:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 17:20:18] ANSI_COLOR="0;31"
[2025-10-22 17:20:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 17:20:18] HOME_URL="https://www.centos.org/"
[2025-10-22 17:20:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 17:20:18] 
[2025-10-22 17:20:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 17:20:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 17:20:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 17:20:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 17:20:18] 
[2025-10-22 17:20:18] 2025-10-22 15:19:27,013 | INFO     | ***************************************
[2025-10-22 17:20:18] 2025-10-22 15:19:27,517 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-22 17:20:18] 2025-10-22 15:19:27,696 | INFO     | sufficient remaining disk space (495896756224 B)
[2025-10-22 17:20:18] 2025-10-22 15:19:27,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 17:20:18] 2025-10-22 15:19:27,697 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 17:20:18] 2025-10-22 15:19:27,697 | INFO     | update_server=False
[2025-10-22 17:20:18] 2025-10-22 15:19:27,697 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 17:20:18] 2025-10-22 15:19:27,697 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 17:20:18] 2025-10-22 15:19:27,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 17:20:18] 2025-10-22 15:19:27,715 | INFO     | aborting loop
[2025-10-22 17:20:18] 2025-10-22 15:19:28,161 | INFO     | all data control threads have been joined
[2025-10-22 17:20:18] 2025-10-22 15:19:28,702 | INFO     | [job] retrieve thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:28,720 | INFO     | [job] job monitor thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:28,914 | INFO     | all job control threads have been joined
[2025-10-22 17:20:18] 2025-10-22 15:19:28,937 | INFO     | [payload] validate_post thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:29,107 | INFO     | all payload control threads have been joined
[2025-10-22 17:20:18] 2025-10-22 15:19:29,157 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:29,167 | INFO     | [data] control thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:29,224 | INFO     | [data] copytool_in thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:29,234 | INFO     | [payload] failed_post thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:29,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:29,257 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:29,298 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:29,345 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 17:20:18] 2025-10-22 15:19:29,704 | INFO     | [data] copytool_out thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:29,779 | INFO     | [job] validate thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:29,920 | INFO     | [job] control thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:30,113 | INFO     | [payload] control thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:30,351 | INFO     | [job] queue monitor thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:30,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 17:20:18] 2025-10-22 15:19:34,749 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 17:20:18] 2025-10-22 15:19:56,120 | INFO     | PID=14538 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-22 17:20:18] 2025-10-22 15:19:56,120 | INFO     | .. there are 9 such processes running
[2025-10-22 17:20:18] 2025-10-22 15:19:56,121 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 17:20:18] 2025-10-22 15:19:56,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 17:20:18] 2025-10-22 15:19:56,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 17:20:18] 2025-10-22 15:20:06,698 | INFO     | [monitor] cgroup control has ended
[2025-10-22 17:20:18] 2025-10-22 15:20:08,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587484477248)>', '<ExcThread(monitor, started 140586610841344)>']
[2025-10-22 17:20:18] 2025-10-22 15:20:09,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 17:20:18] 2025-10-22 15:20:09,198 | INFO     | [monitor] control thread has ended
[2025-10-22 17:20:18] 2025-10-22 15:20:13,255 | INFO     | all workflow threads have been joined
[2025-10-22 17:20:18] 2025-10-22 15:20:13,256 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 17:20:18] 2025-10-22 15:20:13,256 | INFO     | traces error code: 0
[2025-10-22 17:20:18] 2025-10-22 15:20:13,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 17:20:18] 2025-10-22 15:20:13,533 [wrapper] ==== pilot stdout END ====
[2025-10-22 17:20:18] 2025-10-22 15:20:13,626 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 17:20:18] 2025-10-22 15:20:13,692 [wrapper] pilotpid: 14538
[2025-10-22 17:20:18] 2025-10-22 15:20:13,791 [wrapper] Pilot exit status: 0
[2025-10-22 17:20:18] 2025-10-22 15:20:14,253 [wrapper] pandaids: 6853167241
[2025-10-22 17:20:18] 2025-10-22 15:20:15,350 [wrapper] cleanup supervisor_pilot 15078 14539
[2025-10-22 17:20:18] 2025-10-22 15:20:15,454 [wrapper] Test setup, not cleaning
[2025-10-22 17:20:18] 2025-10-22 15:20:15,585 [wrapper] apfmon messages muted
[2025-10-22 17:20:18] 2025-10-22 15:20:15,667 [wrapper] ==== wrapper stdout END ====
[2025-10-22 17:20:18] 2025-10-22 15:20:15,769 [wrapper] ==== wrapper stderr END ====
[2025-10-22 17:20:18]  *** Error codes and diagnostics ***
[2025-10-22 17:20:18]     "exeErrorCode": 0,
[2025-10-22 17:20:18]     "exeErrorDiag": "",
[2025-10-22 17:20:18]     "pilotErrorCode": 0,
[2025-10-22 17:20:18]     "pilotErrorDiag": "",
[2025-10-22 17:20:18]  *** Listing of results directory ***
[2025-10-22 17:20:18] total 438276
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc    557409 Oct 21 22:33 pilot3.tar.gz
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc      5112 Oct 21 22:48 queuedata.json
[2025-10-22 17:20:18] -rwx------. 1 boinc boinc     36292 Oct 21 22:50 runpilot2-wrapper.sh
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc       100 Oct 22 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 17:20:18] -rwxr-xr-x. 1 boinc boinc      7986 Oct 22 13:02 run_atlas
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc       105 Oct 22 13:02 job.xml
[2025-10-22 17:20:18] -rw-r--r--. 2 boinc boinc 230663003 Oct 22 13:02 EVNT.46771634._002959.pool.root.1
[2025-10-22 17:20:18] -rw-r--r--. 2 boinc boinc     15120 Oct 22 13:02 start_atlas.sh
[2025-10-22 17:20:18] drwxrwx--x. 2 boinc boinc        68 Oct 22 13:02 shared
[2025-10-22 17:20:18] -rw-r--r--. 2 boinc boinc    569679 Oct 22 13:02 input.tar.gz
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc      6390 Oct 22 13:02 init_data.xml
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc         0 Oct 22 13:02 boinc_lockfile
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc      2560 Oct 22 13:02 pandaJob.out
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc    976986 Oct 22 13:06 agis_schedconf.cvmfs.json
[2025-10-22 17:20:18] drwx------. 5 boinc boinc      4096 Oct 22 13:06 pilot3
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc 209220616 Oct 22 17:16 HITS.46771637._074428.pool.root.1
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc       531 Oct 22 17:16 boinc_task_state.xml
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc      1017 Oct 22 17:17 memory_monitor_summary.json
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc   1560740 Oct 22 17:17 agis_ddmendpoints.agis.ALL.json
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc    477112 Oct 22 17:17 log.46771637._074428.job.log.tgz.1
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc      7798 Oct 22 17:19 heartbeat.json
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc        95 Oct 22 17:19 pilot_heartbeat.json
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc      8192 Oct 22 17:20 boinc_mmap_file
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc        28 Oct 22 17:20 wrapper_checkpoint.txt
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc      4884 Oct 22 17:20 pilotlog.txt
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc   2028233 Oct 22 17:20 log.46771637._074428.job.log.1
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc       357 Oct 22 17:20 output.list
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc       620 Oct 22 17:20 runtime_log
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc   2529280 Oct 22 17:20 result.tar.gz
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc      8703 Oct 22 17:20 runtime_log.err
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc       657 Oct 22 17:20 OLAODmdUYV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjd3NDmPEUEMo.diag
[2025-10-22 17:20:18] -rw-r--r--. 1 boinc boinc     20817 Oct 22 17:20 stderr.txt
[2025-10-22 17:20:18] HITS file was successfully produced:
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc 209220616 Oct 22 17:16 shared/HITS.pool.root.1
[2025-10-22 17:20:18]  *** Contents of shared directory: ***
[2025-10-22 17:20:18] total 432628
[2025-10-22 17:20:18] -rw-r--r--. 2 boinc boinc 230663003 Oct 22 13:02 ATLAS.root_0
[2025-10-22 17:20:18] -rw-r--r--. 2 boinc boinc     15120 Oct 22 13:02 start_atlas.sh
[2025-10-22 17:20:18] -rw-r--r--. 2 boinc boinc    569679 Oct 22 13:02 input.tar.gz
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc 209220616 Oct 22 17:16 HITS.pool.root.1
[2025-10-22 17:20:18] -rw-------. 1 boinc boinc   2529280 Oct 22 17:20 result.tar.gz
17:20:20 (10791): run_atlas exited; CPU time 56379.045706
17:20:20 (10791): called boinc_finish(0)

</stderr_txt>
]]>

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