Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:09:12 (657405): wrapper (7.7.26015): starting
18:09:12 (657405): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 18:09:12] Arguments: --nthreads 8
[2025-10-21 18:09:12] Threads: 8
[2025-10-21 18:09:12] Checking for CVMFS
[2025-10-21 18:09:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 18:09:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 18:09:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 18:09:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 18:09:14] 2.12.6.0 3376676 98459 323944 151972 3 352 17249162 18491393 18888 16776704 0 148868644 99.429 215640508 31749 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-21 18:09:14] CVMFS is ok
[2025-10-21 18:09:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 18:09:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 18:09:14] Further information can be found at the LHC@home message board.
[2025-10-21 18:09:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 18:09:14] Checking for apptainer binary...
[2025-10-21 18:09:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 18:09:14] Running /usr/bin/apptainer --version
[2025-10-21 18:09:14] apptainer version 1.4.1-1.el9
[2025-10-21 18:09:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 18:09:14] c-8-38.aglt2.org
[2025-10-21 18:09:14] apptainer works
[2025-10-21 18:09:14] Set ATHENA_PROC_NUMBER=8
[2025-10-21 18:09:14] Set ATHENA_CORE_NUMBER=8
[2025-10-21 18:09:14] Starting ATLAS job with PandaID=6853080711
[2025-10-21 18:09:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 21:29:26]  *** The last 200 lines of the pilot log: ***
[2025-10-21 21:29:26] 2025-10-22 01:28:44,992 | INFO     | monitor loop #806: job 0:6853080711 is in state 'finished'
[2025-10-21 21:29:26] 2025-10-22 01:28:44,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 21:29:26] 2025-10-22 01:28:45,407 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-21 21:29:26] 2025-10-22 01:28:45,417 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1490000000003
[2025-10-21 21:29:26] 2025-10-22 01:28:45,426 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6853080711/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 21:29:26] 2025-10-22 01:28:45,427 | INFO     | extracted standard info from prmon json
[2025-10-21 21:29:26] 2025-10-22 01:28:45,427 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 21:29:26] 2025-10-22 01:28:45,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 21:29:26] 2025-10-22 01:28:45,428 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 21:29:26] 2025-10-22 01:28:45,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 21:29:26] 2025-10-22 01:28:45,432 | INFO     | fitting pss+swap vs Time
[2025-10-21 21:29:26] 2025-10-22 01:28:45,433 | INFO     | sum of square deviations: 2263910117.1391683
[2025-10-21 21:29:26] 2025-10-22 01:28:45,436 | INFO     | sum of deviations: 21072222786.768013
[2025-10-21 21:29:26] 2025-10-22 01:28:45,436 | INFO     | mean x: 1761090572.097938
[2025-10-21 21:29:26] 2025-10-22 01:28:45,436 | INFO     | mean y: 2121560.1701030927
[2025-10-21 21:29:26] 2025-10-22 01:28:45,436 | INFO     | -- intersect: -16389913000.733463
[2025-10-21 21:29:26] 2025-10-22 01:28:45,436 | INFO     | intersect: -16389913000.733463
[2025-10-21 21:29:26] 2025-10-22 01:28:45,437 | INFO     | chi2: 2.919520397702776
[2025-10-21 21:29:26] 2025-10-22 01:28:45,437 | INFO     | sum of square deviations: 2093259156.423283
[2025-10-21 21:29:26] 2025-10-22 01:28:45,438 | INFO     | sum of deviations: 32420741877.058216
[2025-10-21 21:29:26] 2025-10-22 01:28:45,438 | INFO     | mean x: 1761090419.5661376
[2025-10-21 21:29:26] 2025-10-22 01:28:45,439 | INFO     | mean y: 2131533.915343915
[2025-10-21 21:29:26] 2025-10-22 01:28:45,439 | INFO     | -- intersect: -27273926349.1767
[2025-10-21 21:29:26] 2025-10-22 01:28:45,439 | INFO     | intersect: -27273926349.1767
[2025-10-21 21:29:26] 2025-10-22 01:28:45,440 | INFO     | chi2: 2.2553439200972183
[2025-10-21 21:29:26] 2025-10-22 01:28:45,440 | INFO     | current chi2=2.2553439200972183 (change=22.74950632741476 %)
[2025-10-21 21:29:26] 2025-10-22 01:28:45,440 | INFO     | right removable region: 188
[2025-10-21 21:29:26] 2025-10-22 01:28:45,440 | INFO     | sum of square deviations: 2093294792.8042324
[2025-10-21 21:29:26] 2025-10-22 01:28:45,441 | INFO     | sum of deviations: -14624297082.92593
[2025-10-21 21:29:26] 2025-10-22 01:28:45,442 | INFO     | mean x: 1761090724.6137567
[2025-10-21 21:29:26] 2025-10-22 01:28:45,442 | INFO     | mean y: 2153303.7407407407
[2025-10-21 21:29:26] 2025-10-22 01:28:45,442 | INFO     | -- intersect: 12305587122.651255
[2025-10-21 21:29:26] 2025-10-22 01:28:45,442 | INFO     | intersect: 12305587122.651255
[2025-10-21 21:29:26] 2025-10-22 01:28:45,442 | INFO     | chi2: 0.9499977122553613
[2025-10-21 21:29:26] 2025-10-22 01:28:45,442 | INFO     | current chi2=0.9499977122553613 (change=67.4604872429435 %)
[2025-10-21 21:29:26] 2025-10-22 01:28:45,443 | INFO     | sum of square deviations: 1931504794.6032593
[2025-10-21 21:29:26] 2025-10-22 01:28:45,444 | INFO     | sum of deviations: -24527440874.711967
[2025-10-21 21:29:26] 2025-10-22 01:28:45,444 | INFO     | mean x: 1761090877.1141305
[2025-10-21 21:29:26] 2025-10-22 01:28:45,444 | INFO     | mean y: 2162587.0815217393
[2025-10-21 21:29:26] 2025-10-22 01:28:45,444 | INFO     | -- intersect: 22365582281.45714
[2025-10-21 21:29:26] 2025-10-22 01:28:45,444 | INFO     | intersect: 22365582281.45714
[2025-10-21 21:29:26] 2025-10-22 01:28:45,445 | INFO     | chi2: 0.7587997088550504
[2025-10-21 21:29:26] 2025-10-22 01:28:45,445 | INFO     | current chi2=0.7587997088550504 (change=20.126154087928633 %)
[2025-10-21 21:29:26] 2025-10-22 01:28:45,445 | INFO     | left removable region: 20
[2025-10-21 21:29:26] 2025-10-22 01:28:45,445 | INFO     | sum of square deviations: 1470228102.994046
[2025-10-21 21:29:26] 2025-10-22 01:28:45,446 | INFO     | sum of deviations: -11862585096.434526
[2025-10-21 21:29:26] 2025-10-22 01:28:45,446 | INFO     | mean x: 1761090999.0059524
[2025-10-21 21:29:26] 2025-10-22 01:28:45,446 | INFO     | mean y: 2175260.4345238097
[2025-10-21 21:29:26] 2025-10-22 01:28:45,446 | INFO     | -- intersect: 14211597455.350632
[2025-10-21 21:29:26] 2025-10-22 01:28:45,447 | INFO     | intersect: 14211597455.350632
[2025-10-21 21:29:26] 2025-10-22 01:28:45,447 | INFO     | chi2: 0.06919953861466435
[2025-10-21 21:29:26] 2025-10-22 01:28:45,447 | INFO     | -- intersect: 14211597455.350632
[2025-10-21 21:29:26] 2025-10-22 01:28:45,447 | INFO     | current memory leak: -8.07 B/s (using 168 data points, chi2=0.07)
[2025-10-21 21:29:26] 2025-10-22 01:28:45,448 | INFO     | could have reported an average CPU frequency of 2600 MHz (10 samples)
[2025-10-21 21:29:26] 2025-10-22 01:28:45,448 | INFO     | ..............................
[2025-10-21 21:29:26] 2025-10-22 01:28:45,448 | INFO     | . Timing measurements:
[2025-10-21 21:29:26] 2025-10-22 01:28:45,448 | INFO     | . get job = 0 s
[2025-10-21 21:29:26] 2025-10-22 01:28:45,448 | INFO     | . initial setup = 3 s
[2025-10-21 21:29:26] 2025-10-22 01:28:45,448 | INFO     | . payload setup = 26 s
[2025-10-21 21:29:26] 2025-10-22 01:28:45,449 | INFO     | . stage-in = 0 s
[2025-10-21 21:29:26] 2025-10-22 01:28:45,449 | INFO     | . payload execution = 11816 s
[2025-10-21 21:29:26] 2025-10-22 01:28:45,449 | INFO     | . stage-out = 5 s
[2025-10-21 21:29:26] 2025-10-22 01:28:45,449 | INFO     | . log creation = 1 s
[2025-10-21 21:29:26] 2025-10-22 01:28:45,449 | INFO     | ..............................
[2025-10-21 21:29:26] 2025-10-22 01:28:45,792 | INFO     | time since job start (11927s) is within the limit (172800.0s)
[2025-10-21 21:29:26] 2025-10-22 01:28:45,804 | INFO     | 
[2025-10-21 21:29:26] 2025-10-22 01:28:45,805 | INFO     | job summary report
[2025-10-21 21:29:26] 2025-10-22 01:28:45,805 | INFO     | --------------------------------------------------
[2025-10-21 21:29:26] 2025-10-22 01:28:45,805 | INFO     | PanDA job id: 6853080711
[2025-10-21 21:29:26] 2025-10-22 01:28:45,805 | INFO     | task id: 46771637
[2025-10-21 21:29:26] 2025-10-22 01:28:45,805 | INFO     | errors: (none)
[2025-10-21 21:29:26] 2025-10-22 01:28:45,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 21:29:26] 2025-10-22 01:28:45,805 | INFO     | pilot state: finished 
[2025-10-21 21:29:26] 2025-10-22 01:28:45,805 | INFO     | transexitcode: 0
[2025-10-21 21:29:26] 2025-10-22 01:28:45,805 | INFO     | exeerrorcode: 0
[2025-10-21 21:29:26] 2025-10-22 01:28:45,805 | INFO     | exeerrordiag: 
[2025-10-21 21:29:26] 2025-10-22 01:28:45,806 | INFO     | exitcode: 0
[2025-10-21 21:29:26] 2025-10-22 01:28:45,806 | INFO     | exitmsg: OK
[2025-10-21 21:29:26] 2025-10-22 01:28:45,806 | INFO     | cpuconsumptiontime: 55584 s
[2025-10-21 21:29:26] 2025-10-22 01:28:45,806 | INFO     | nevents: 400
[2025-10-21 21:29:26] 2025-10-22 01:28:45,806 | INFO     | neventsw: 0
[2025-10-21 21:29:26] 2025-10-22 01:28:45,806 | INFO     | pid: 672587
[2025-10-21 21:29:26] 2025-10-22 01:28:45,806 | INFO     | pgrp: 672587
[2025-10-21 21:29:26] 2025-10-22 01:28:45,806 | INFO     | corecount: 8
[2025-10-21 21:29:26] 2025-10-22 01:28:45,806 | INFO     | event service: False
[2025-10-21 21:29:26] 2025-10-22 01:28:45,807 | INFO     | sizes: {0: 2348759, 1: 2348958, 12: 2348958, 22: 2349248, 23: 2349276, 11847: 2379124, 11848: 2379251, 11855: 2388361, 11887: 2388499}
[2025-10-21 21:29:26] 2025-10-22 01:28:45,807 | INFO     | --------------------------------------------------
[2025-10-21 21:29:26] 2025-10-22 01:28:45,807 | INFO     | 
[2025-10-21 21:29:26] 2025-10-22 01:28:45,807 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 21:29:26] 2025-10-22 01:28:46,014 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,014 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,014 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,014 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,014 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 21:29:26] 2025-10-22 01:28:46,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,016 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 21:29:26] 2025-10-22 01:28:46,016 | INFO     | job 6853080711 has completed (purged errors)
[2025-10-21 21:29:26] 2025-10-22 01:28:46,016 | INFO     | overall cleanup function is called
[2025-10-21 21:29:26] 2025-10-22 01:28:47,088 | INFO     | --- collectZombieJob: --- 10, [672587]
[2025-10-21 21:29:26] 2025-10-22 01:28:47,089 | INFO     | zombie collector waiting for pid 672587
[2025-10-21 21:29:26] 2025-10-22 01:28:47,089 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 21:29:26] 2025-10-22 01:28:47,089 | INFO     | collected zombie processes
[2025-10-21 21:29:26] 2025-10-22 01:28:47,089 | INFO     | will attempt to kill all subprocesses of pid=672587
[2025-10-21 21:29:26] 2025-10-22 01:28:48,083 | INFO     | process IDs to be killed: [672587] (in reverse order)
[2025-10-21 21:29:26] 2025-10-22 01:28:48,347 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 21:29:26] 2025-10-22 01:28:48,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 21:29:26] 2025-10-22 01:28:48,376 | INFO     | did not find any defunct processes belonging to 672587
[2025-10-21 21:29:26] 2025-10-22 01:28:48,400 | INFO     | did not find any defunct processes belonging to 672587
[2025-10-21 21:29:26] 2025-10-22 01:28:48,401 | INFO     | ready for new job
[2025-10-21 21:29:26] 2025-10-22 01:28:48,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 21:29:26] 2025-10-22 01:28:48,403 | INFO     | ***************************************
[2025-10-21 21:29:26] 2025-10-22 01:28:48,403 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 21:29:26] 2025-10-22 01:28:48,407 | INFO     | ***************************************
[2025-10-21 21:29:26] 2025-10-22 01:28:48,407 | INFO     | 
[2025-10-21 21:29:26] 2025-10-22 01:28:48,423 | INFO     | architecture information:
[2025-10-21 21:29:26] 2025-10-22 01:28:48,427 | INFO     | executing command: cat /etc/os-release
[2025-10-21 21:29:26] 2025-10-22 01:28:48,485 | INFO     | cat /etc/os-release:
[2025-10-21 21:29:26] NAME="CentOS Linux"
[2025-10-21 21:29:26] VERSION="7 (Core)"
[2025-10-21 21:29:26] ID="centos"
[2025-10-21 21:29:26] ID_LIKE="rhel fedora"
[2025-10-21 21:29:26] VERSION_ID="7"
[2025-10-21 21:29:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 21:29:26] ANSI_COLOR="0;31"
[2025-10-21 21:29:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 21:29:26] HOME_URL="https://www.centos.org/"
[2025-10-21 21:29:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 21:29:26] 
[2025-10-21 21:29:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 21:29:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 21:29:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 21:29:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 21:29:26] 
[2025-10-21 21:29:26] 2025-10-22 01:28:48,485 | INFO     | ***************************************
[2025-10-21 21:29:26] 2025-10-22 01:28:48,991 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 21:29:26] 2025-10-22 01:28:49,100 | INFO     | sufficient remaining disk space (95124717568 B)
[2025-10-21 21:29:26] 2025-10-22 01:28:49,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 21:29:26] 2025-10-22 01:28:49,100 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 21:29:26] 2025-10-22 01:28:49,100 | INFO     | update_server=False
[2025-10-21 21:29:26] 2025-10-22 01:28:49,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 21:29:26] 2025-10-22 01:28:49,101 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 21:29:26] 2025-10-22 01:28:49,101 | INFO     | aborting loop
[2025-10-21 21:29:26] 2025-10-22 01:28:49,404 | INFO     | all data control threads have been joined
[2025-10-21 21:29:26] 2025-10-22 01:28:49,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 21:29:26] 2025-10-22 01:28:49,666 | INFO     | all payload control threads have been joined
[2025-10-21 21:29:26] 2025-10-22 01:28:50,110 | INFO     | [job] retrieve thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:50,129 | INFO     | [job] job monitor thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:50,205 | INFO     | [payload] failed_post thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:50,284 | INFO     | [data] copytool_in thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:50,386 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:50,415 | INFO     | [data] control thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:50,441 | INFO     | [payload] validate_post thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:50,651 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:50,673 | INFO     | all job control threads have been joined
[2025-10-21 21:29:26] 2025-10-22 01:28:50,674 | INFO     | [payload] control thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:50,682 | INFO     | [job] validate thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:50,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 21:29:26] 2025-10-22 01:28:51,456 | INFO     | [data] copytool_out thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:51,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:51,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 21:29:26] 2025-10-22 01:28:51,570 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:51,679 | INFO     | [job] control thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:51,824 | INFO     | [job] queue monitor thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:28:55,591 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 21:29:26] 2025-10-22 01:29:18,998 | INFO     | [monitor] cgroup control has ended
[2025-10-21 21:29:26] 2025-10-22 01:29:19,673 | INFO     | PID=661332 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 21:29:26] 2025-10-22 01:29:19,674 | INFO     | .. there are 29 such processes running
[2025-10-21 21:29:26] 2025-10-22 01:29:19,679 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 21:29:26] 2025-10-22 01:29:19,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 21:29:26] 2025-10-22 01:29:19,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 21:29:26] 2025-10-22 01:29:19,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125813036864)>', '<ExcThread(monitor, started 140125170292480)>']
[2025-10-21 21:29:26] 2025-10-22 01:29:20,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 21:29:26] 2025-10-22 01:29:20,686 | INFO     | [monitor] control thread has ended
[2025-10-21 21:29:26] 2025-10-22 01:29:24,796 | INFO     | all workflow threads have been joined
[2025-10-21 21:29:26] 2025-10-22 01:29:24,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 21:29:26] 2025-10-22 01:29:24,797 | INFO     | traces error code: 0
[2025-10-21 21:29:26] 2025-10-22 01:29:24,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 21:29:26] 2025-10-22 01:29:25,718 [wrapper] ==== pilot stdout END ====
[2025-10-21 21:29:26] 2025-10-22 01:29:25,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 21:29:26] 2025-10-22 01:29:25,909 [wrapper] pilotpid: 661332
[2025-10-21 21:29:26] 2025-10-22 01:29:25,927 [wrapper] Pilot exit status: 0
[2025-10-21 21:29:26] 2025-10-22 01:29:25,982 [wrapper] pandaids: 6853080711
[2025-10-21 21:29:26] 2025-10-22 01:29:26,370 [wrapper] cleanup supervisor_pilot 1081324 661333
[2025-10-21 21:29:26] 2025-10-22 01:29:26,388 [wrapper] Test setup, not cleaning
[2025-10-21 21:29:26] 2025-10-22 01:29:26,422 [wrapper] apfmon messages muted
[2025-10-21 21:29:26] 2025-10-22 01:29:26,456 [wrapper] ==== wrapper stdout END ====
[2025-10-21 21:29:26] 2025-10-22 01:29:26,488 [wrapper] ==== wrapper stderr END ====
[2025-10-21 21:29:26]  *** Error codes and diagnostics ***
[2025-10-21 21:29:26]     "exeErrorCode": 0,
[2025-10-21 21:29:26]     "exeErrorDiag": "",
[2025-10-21 21:29:26]     "pilotErrorCode": 0,
[2025-10-21 21:29:26]     "pilotErrorDiag": "",
[2025-10-21 21:29:26]  *** Listing of results directory ***
[2025-10-21 21:29:26] total 445792
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 21 09:27 pilot3.tar.gz
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 21 09:54 queuedata.json
[2025-10-21 21:29:26] -rwx------. 1 boincer umatlas     36292 Oct 21 09:56 runpilot2-wrapper.sh
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas       100 Oct 21 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 21:29:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 18:09 run_atlas
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas       105 Oct 21 18:09 job.xml
[2025-10-21 21:29:26] -rw-r--r--. 2 boincer umatlas 231442994 Oct 21 18:09 EVNT.46771634._002725.pool.root.1
[2025-10-21 21:29:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 18:09 start_atlas.sh
[2025-10-21 21:29:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 18:09 shared
[2025-10-21 21:29:26] -rw-r--r--. 2 boincer umatlas    569682 Oct 21 18:09 input.tar.gz
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas         0 Oct 21 18:09 boinc_lockfile
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas      2559 Oct 21 18:09 pandaJob.out
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas    978456 Oct 21 18:09 agis_schedconf.cvmfs.json
[2025-10-21 21:29:26] drwx------. 5 boincer umatlas      4096 Oct 21 18:09 pilot3
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas      6660 Oct 21 21:22 init_data.xml
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas 217042097 Oct 21 21:26 HITS.46771637._068655.pool.root.1
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas       530 Oct 21 21:26 boinc_task_state.xml
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas      1041 Oct 21 21:28 memory_monitor_summary.json
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas   1560740 Oct 21 21:28 agis_ddmendpoints.agis.ALL.json
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas    442605 Oct 21 21:28 log.46771637._068655.job.log.tgz.1
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas      7826 Oct 21 21:28 heartbeat.json
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas        28 Oct 21 21:29 wrapper_checkpoint.txt
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 21:29 boinc_mmap_file
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas        95 Oct 21 21:29 pilot_heartbeat.json
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas      4823 Oct 21 21:29 pilotlog.txt
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas   1610138 Oct 21 21:29 log.46771637._068655.job.log.1
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas       357 Oct 21 21:29 output.list
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas       620 Oct 21 21:29 runtime_log
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas   2068480 Oct 21 21:29 result.tar.gz
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas      8694 Oct 21 21:29 runtime_log.err
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas       653 Oct 21 21:29 KLZKDmh1RV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmOgfMDmS7Y98n.diag
[2025-10-21 21:29:26] -rw-r--r--. 1 boincer umatlas     21217 Oct 21 21:29 stderr.txt
[2025-10-21 21:29:26] HITS file was successfully produced:
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas 217042097 Oct 21 21:26 shared/HITS.pool.root.1
[2025-10-21 21:29:26]  *** Contents of shared directory: ***
[2025-10-21 21:29:26] total 440576
[2025-10-21 21:29:26] -rw-r--r--. 2 boincer umatlas 231442994 Oct 21 18:09 ATLAS.root_0
[2025-10-21 21:29:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 18:09 start_atlas.sh
[2025-10-21 21:29:26] -rw-r--r--. 2 boincer umatlas    569682 Oct 21 18:09 input.tar.gz
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas 217042097 Oct 21 21:26 HITS.pool.root.1
[2025-10-21 21:29:26] -rw-------. 1 boincer umatlas   2068480 Oct 21 21:29 result.tar.gz
21:29:48 (657405): run_atlas exited; CPU time 55967.329800
21:29:48 (657405): called boinc_finish(0)

</stderr_txt>
]]>

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