Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:55:50 (3462): wrapper (7.7.26015): starting
16:55:50 (3462): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 16:55:50] Arguments: --nthreads 8
[2025-10-21 16:55:50] Threads: 8
[2025-10-21 16:55:50] Checking for CVMFS
[2025-10-21 16:55:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 16:55:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 16:55:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 16:55:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 16:55:51] 2.11.2.0 6509 66311 79928 151970 3 59 13452264 20275200 1 130560 0 26951327 99.945 3142889 37037 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-21 16:55:51] CVMFS is ok
[2025-10-21 16:55:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 16:55:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 16:55:51] Further information can be found at the LHC@home message board.
[2025-10-21 16:55:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 16:55:51] Checking for apptainer binary...
[2025-10-21 16:55:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 16:55:51] Running /usr/bin/apptainer --version
[2025-10-21 16:55:51] apptainer version 1.3.2-1.el7
[2025-10-21 16:55:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 16:55:52] c-204-16.aglt2.org
[2025-10-21 16:55:52] apptainer works
[2025-10-21 16:55:52] Set ATHENA_PROC_NUMBER=8
[2025-10-21 16:55:52] Set ATHENA_CORE_NUMBER=8
[2025-10-21 16:55:52] Starting ATLAS job with PandaID=6853058510
[2025-10-21 16:55:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 19:14:29]  *** The last 200 lines of the pilot log: ***
[2025-10-21 19:14:29] 2025-10-21 23:13:25,276 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 19:14:29] 2025-10-21 23:13:25,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 19:14:29] 2025-10-21 23:13:25,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 19:14:29] 2025-10-21 23:13:25,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 19:14:29] 2025-10-21 23:13:25,281 | INFO     | fitting pss+swap vs Time
[2025-10-21 19:14:29] 2025-10-21 23:13:25,281 | INFO     | sum of square deviations: 762879420.0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,282 | INFO     | sum of deviations: 2001093288.0000095
[2025-10-21 19:14:29] 2025-10-21 23:13:25,282 | INFO     | mean x: 1761084288.0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,282 | INFO     | mean y: 2482315.5037037036
[2025-10-21 19:14:29] 2025-10-21 23:13:25,282 | INFO     | -- intersect: -4616981594.427273
[2025-10-21 19:14:29] 2025-10-21 23:13:25,282 | INFO     | intersect: -4616981594.427273
[2025-10-21 19:14:29] 2025-10-21 23:13:25,283 | INFO     | chi2: 2.2375234890708837
[2025-10-21 19:14:29] 2025-10-21 23:13:25,283 | INFO     | sum of square deviations: 681212772.5
[2025-10-21 19:14:29] 2025-10-21 23:13:25,284 | INFO     | sum of deviations: 10711469032.999996
[2025-10-21 19:14:29] 2025-10-21 23:13:25,284 | INFO     | mean x: 1761084135.5
[2025-10-21 19:14:29] 2025-10-21 23:13:25,284 | INFO     | mean y: 2498079.969230769
[2025-10-21 19:14:29] 2025-10-21 23:13:25,284 | INFO     | -- intersect: -27688994128.386005
[2025-10-21 19:14:29] 2025-10-21 23:13:25,284 | INFO     | intersect: -27688994128.386005
[2025-10-21 19:14:29] 2025-10-21 23:13:25,284 | INFO     | chi2: 1.4699072934612045
[2025-10-21 19:14:29] 2025-10-21 23:13:25,285 | INFO     | current chi2=1.4699072934612045 (change=34.30650893092642 %)
[2025-10-21 19:14:29] 2025-10-21 23:13:25,285 | INFO     | sum of square deviations: 605592750.0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,286 | INFO     | sum of deviations: 10297193084.0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,286 | INFO     | mean x: 1761083983.0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,286 | INFO     | mean y: 2497243.744
[2025-10-21 19:14:29] 2025-10-21 23:13:25,286 | INFO     | -- intersect: -29942084837.350555
[2025-10-21 19:14:29] 2025-10-21 23:13:25,286 | INFO     | intersect: -29942084837.350555
[2025-10-21 19:14:29] 2025-10-21 23:13:25,286 | INFO     | chi2: 1.4720940174635309
[2025-10-21 19:14:29] 2025-10-21 23:13:25,286 | INFO     | current chi2=1.4720940174635309 (change=-0.14876611688736063 %)
[2025-10-21 19:14:29] 2025-10-21 23:13:25,287 | INFO     | right removable region: 124
[2025-10-21 19:14:29] 2025-10-21 23:13:25,287 | INFO     | sum of square deviations: 681212772.5
[2025-10-21 19:14:29] 2025-10-21 23:13:25,287 | INFO     | sum of deviations: -16932637420.0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,288 | INFO     | mean x: 1761084440.5
[2025-10-21 19:14:29] 2025-10-21 23:13:25,288 | INFO     | mean y: 2517032.1384615386
[2025-10-21 19:14:29] 2025-10-21 23:13:25,288 | INFO     | -- intersect: 43777098926.065094
[2025-10-21 19:14:29] 2025-10-21 23:13:25,288 | INFO     | intersect: 43777098926.065094
[2025-10-21 19:14:29] 2025-10-21 23:13:25,288 | INFO     | chi2: 0.8888605513548208
[2025-10-21 19:14:29] 2025-10-21 23:13:25,288 | INFO     | current chi2=0.8888605513548208 (change=60.27480579772979 %)
[2025-10-21 19:14:29] 2025-10-21 23:13:25,289 | INFO     | sum of square deviations: 605592750.0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,289 | INFO     | sum of deviations: -15353455939.0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,289 | INFO     | mean x: 1761084593.0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,289 | INFO     | mean y: 2513729.824
[2025-10-21 19:14:29] 2025-10-21 23:13:25,290 | INFO     | -- intersect: 44650892864.939545
[2025-10-21 19:14:29] 2025-10-21 23:13:25,290 | INFO     | intersect: 44650892864.939545
[2025-10-21 19:14:29] 2025-10-21 23:13:25,290 | INFO     | chi2: 0.8729865630902203
[2025-10-21 19:14:29] 2025-10-21 23:13:25,290 | INFO     | current chi2=0.8729865630902203 (change=1.785880613151864 %)
[2025-10-21 19:14:29] 2025-10-21 23:13:25,290 | INFO     | left removable region: 20
[2025-10-21 19:14:29] 2025-10-21 23:13:25,290 | INFO     | sum of square deviations: 348769330.0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,291 | INFO     | sum of deviations: 900579264.5
[2025-10-21 19:14:29] 2025-10-21 23:13:25,291 | INFO     | mean x: 1761084562.5
[2025-10-21 19:14:29] 2025-10-21 23:13:25,291 | INFO     | mean y: 2512852.278846154
[2025-10-21 19:14:29] 2025-10-21 23:13:25,291 | INFO     | -- intersect: -4544894570.324954
[2025-10-21 19:14:29] 2025-10-21 23:13:25,291 | INFO     | intersect: -4544894570.324954
[2025-10-21 19:14:29] 2025-10-21 23:13:25,292 | INFO     | chi2: 0.000322738785137314
[2025-10-21 19:14:29] 2025-10-21 23:13:25,292 | INFO     | -- intersect: -4544894570.324954
[2025-10-21 19:14:29] 2025-10-21 23:13:25,292 | INFO     | current memory leak: 2.58 B/s (using 104 data points, chi2=0.00)
[2025-10-21 19:14:29] 2025-10-21 23:13:25,292 | INFO     | could have reported an average CPU frequency of 1981 MHz (8 samples)
[2025-10-21 19:14:29] 2025-10-21 23:13:25,293 | INFO     | ..............................
[2025-10-21 19:14:29] 2025-10-21 23:13:25,293 | INFO     | . Timing measurements:
[2025-10-21 19:14:29] 2025-10-21 23:13:25,293 | INFO     | . get job = 0 s
[2025-10-21 19:14:29] 2025-10-21 23:13:25,293 | INFO     | . initial setup = 3 s
[2025-10-21 19:14:29] 2025-10-21 23:13:25,293 | INFO     | . payload setup = 8 s
[2025-10-21 19:14:29] 2025-10-21 23:13:25,293 | INFO     | . stage-in = 0 s
[2025-10-21 19:14:29] 2025-10-21 23:13:25,293 | INFO     | . payload execution = 8198 s
[2025-10-21 19:14:29] 2025-10-21 23:13:25,293 | INFO     | . stage-out = 0 s
[2025-10-21 19:14:29] 2025-10-21 23:13:25,294 | INFO     | . log creation = 0 s
[2025-10-21 19:14:29] 2025-10-21 23:13:25,294 | INFO     | ..............................
[2025-10-21 19:14:29] 2025-10-21 23:13:25,414 | INFO     | 
[2025-10-21 19:14:29] 2025-10-21 23:13:25,414 | INFO     | job summary report
[2025-10-21 19:14:29] 2025-10-21 23:13:25,414 | INFO     | --------------------------------------------------
[2025-10-21 19:14:29] 2025-10-21 23:13:25,415 | INFO     | PanDA job id: 6853058510
[2025-10-21 19:14:29] 2025-10-21 23:13:25,415 | INFO     | task id: 46771637
[2025-10-21 19:14:29] 2025-10-21 23:13:25,415 | INFO     | errors: (none)
[2025-10-21 19:14:29] 2025-10-21 23:13:25,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 19:14:29] 2025-10-21 23:13:25,415 | INFO     | pilot state: finished 
[2025-10-21 19:14:29] 2025-10-21 23:13:25,415 | INFO     | transexitcode: 0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,416 | INFO     | exeerrorcode: 0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,416 | INFO     | exeerrordiag: 
[2025-10-21 19:14:29] 2025-10-21 23:13:25,416 | INFO     | exitcode: 0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,416 | INFO     | exitmsg: OK
[2025-10-21 19:14:29] 2025-10-21 23:13:25,416 | INFO     | cpuconsumptiontime: 60988 s
[2025-10-21 19:14:29] 2025-10-21 23:13:25,416 | INFO     | nevents: 400
[2025-10-21 19:14:29] 2025-10-21 23:13:25,417 | INFO     | neventsw: 0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,417 | INFO     | pid: 14490
[2025-10-21 19:14:29] 2025-10-21 23:13:25,417 | INFO     | pgrp: 14490
[2025-10-21 19:14:29] 2025-10-21 23:13:25,417 | INFO     | corecount: 8
[2025-10-21 19:14:29] 2025-10-21 23:13:25,417 | INFO     | event service: False
[2025-10-21 19:14:29] 2025-10-21 23:13:25,418 | INFO     | sizes: {0: 2348705, 1: 2348960, 7: 2349222, 12: 2349250, 8210: 2377048, 8211: 2386046, 8212: 2386230, 8218: 2386424}
[2025-10-21 19:14:29] 2025-10-21 23:13:25,418 | INFO     | --------------------------------------------------
[2025-10-21 19:14:29] 2025-10-21 23:13:25,418 | INFO     | 
[2025-10-21 19:14:29] 2025-10-21 23:13:25,418 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 19:14:29] 2025-10-21 23:13:25,448 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,449 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,449 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,449 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,449 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,450 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,450 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,450 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 19:14:29] 2025-10-21 23:13:25,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 19:14:29] 2025-10-21 23:13:25,453 | INFO     | job 6853058510 has completed (purged errors)
[2025-10-21 19:14:29] 2025-10-21 23:13:25,453 | INFO     | overall cleanup function is called
[2025-10-21 19:14:29] 2025-10-21 23:13:26,461 | INFO     | --- collectZombieJob: --- 10, [14490]
[2025-10-21 19:14:29] 2025-10-21 23:13:26,461 | INFO     | zombie collector waiting for pid 14490
[2025-10-21 19:14:29] 2025-10-21 23:13:26,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 19:14:29] 2025-10-21 23:13:26,462 | INFO     | collected zombie processes
[2025-10-21 19:14:29] 2025-10-21 23:13:26,462 | INFO     | will attempt to kill all subprocesses of pid=14490
[2025-10-21 19:14:29] 2025-10-21 23:13:26,556 | INFO     | process IDs to be killed: [14490] (in reverse order)
[2025-10-21 19:14:29] 2025-10-21 23:13:26,614 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 19:14:29] 2025-10-21 23:13:26,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 19:14:29] 2025-10-21 23:13:26,619 | INFO     | did not find any defunct processes belonging to 14490
[2025-10-21 19:14:29] 2025-10-21 23:13:26,623 | INFO     | did not find any defunct processes belonging to 14490
[2025-10-21 19:14:29] 2025-10-21 23:13:26,624 | INFO     | ready for new job
[2025-10-21 19:14:29] 2025-10-21 23:13:26,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 19:14:29] 2025-10-21 23:13:26,626 | INFO     | ***************************************
[2025-10-21 19:14:29] 2025-10-21 23:13:26,626 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 19:14:29] 2025-10-21 23:13:26,626 | INFO     | ***************************************
[2025-10-21 19:14:29] 2025-10-21 23:13:26,626 | INFO     | 
[2025-10-21 19:14:29] 2025-10-21 23:13:26,627 | INFO     | architecture information:
[2025-10-21 19:14:29] 2025-10-21 23:13:26,628 | INFO     | executing command: cat /etc/os-release
[2025-10-21 19:14:29] 2025-10-21 23:13:26,645 | INFO     | cat /etc/os-release:
[2025-10-21 19:14:29] NAME="CentOS Linux"
[2025-10-21 19:14:29] VERSION="7 (Core)"
[2025-10-21 19:14:29] ID="centos"
[2025-10-21 19:14:29] ID_LIKE="rhel fedora"
[2025-10-21 19:14:29] VERSION_ID="7"
[2025-10-21 19:14:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 19:14:29] ANSI_COLOR="0;31"
[2025-10-21 19:14:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 19:14:29] HOME_URL="https://www.centos.org/"
[2025-10-21 19:14:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 19:14:29] 
[2025-10-21 19:14:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 19:14:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 19:14:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 19:14:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 19:14:29] 
[2025-10-21 19:14:29] 2025-10-21 23:13:26,645 | INFO     | ***************************************
[2025-10-21 19:14:29] 2025-10-21 23:13:27,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 19:14:29] 2025-10-21 23:13:27,224 | INFO     | sufficient remaining disk space (18681430016 B)
[2025-10-21 19:14:29] 2025-10-21 23:13:27,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 19:14:29] 2025-10-21 23:13:27,225 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 19:14:29] 2025-10-21 23:13:27,225 | INFO     | update_server=False
[2025-10-21 19:14:29] 2025-10-21 23:13:27,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 19:14:29] 2025-10-21 23:13:27,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 19:14:29] 2025-10-21 23:13:27,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 19:14:29] 2025-10-21 23:13:27,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 19:14:29] 2025-10-21 23:13:27,566 | INFO     | aborting loop
[2025-10-21 19:14:29] 2025-10-21 23:13:27,781 | INFO     | all job control threads have been joined
[2025-10-21 19:14:29] 2025-10-21 23:13:28,190 | INFO     | all payload control threads have been joined
[2025-10-21 19:14:29] 2025-10-21 23:13:28,200 | INFO     | all data control threads have been joined
[2025-10-21 19:14:29] 2025-10-21 23:13:28,227 | INFO     | [job] retrieve thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:28,232 | INFO     | [job] queue monitor thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:28,572 | INFO     | [job] job monitor thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:28,616 | INFO     | [payload] failed_post thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:28,665 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:28,736 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:28,746 | INFO     | [data] copytool_in thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:28,750 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:28,785 | INFO     | [job] control thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:28,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:29,195 | INFO     | [payload] control thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:29,206 | INFO     | [data] control thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:29,231 | INFO     | [data] copytool_out thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:29,462 | INFO     | [payload] validate_post thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:29,707 | INFO     | [job] validate thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:29,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 19:14:29] 2025-10-21 23:13:33,752 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 19:14:29] 2025-10-21 23:13:57,552 | INFO     | PID=8111 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-21 19:14:29] 2025-10-21 23:13:57,552 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 19:14:29] 2025-10-21 23:13:57,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 19:14:29] 2025-10-21 23:13:57,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 19:14:29] 2025-10-21 23:14:22,962 | INFO     | [monitor] cgroup control has ended
[2025-10-21 19:14:29] 2025-10-21 23:14:24,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140563794175808)>', '<ExcThread(monitor, started 140563122738944)>']
[2025-10-21 19:14:29] 2025-10-21 23:14:24,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 19:14:29] 2025-10-21 23:14:24,670 | INFO     | [monitor] control thread has ended
[2025-10-21 19:14:29] 2025-10-21 23:14:29,349 | INFO     | all workflow threads have been joined
[2025-10-21 19:14:29] 2025-10-21 23:14:29,349 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 19:14:29] 2025-10-21 23:14:29,350 | INFO     | traces error code: 0
[2025-10-21 19:14:29] 2025-10-21 23:14:29,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 19:14:29] 2025-10-21 23:14:29,483 [wrapper] ==== pilot stdout END ====
[2025-10-21 19:14:29] 2025-10-21 23:14:29,487 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 19:14:29] 2025-10-21 23:14:29,492 [wrapper] pilotpid: 8111
[2025-10-21 19:14:29] 2025-10-21 23:14:29,497 [wrapper] Pilot exit status: 0
[2025-10-21 19:14:29] 2025-10-21 23:14:29,516 [wrapper] pandaids: 6853058510
[2025-10-21 19:14:29] 2025-10-21 23:14:29,568 [wrapper] cleanup supervisor_pilot 16741 8112
[2025-10-21 19:14:29] 2025-10-21 23:14:29,573 [wrapper] Test setup, not cleaning
[2025-10-21 19:14:29] 2025-10-21 23:14:29,578 [wrapper] apfmon messages muted
[2025-10-21 19:14:29] 2025-10-21 23:14:29,582 [wrapper] ==== wrapper stdout END ====
[2025-10-21 19:14:29] 2025-10-21 23:14:29,587 [wrapper] ==== wrapper stderr END ====
[2025-10-21 19:14:29]  *** Error codes and diagnostics ***
[2025-10-21 19:14:29]     "exeErrorCode": 0,
[2025-10-21 19:14:29]     "exeErrorDiag": "",
[2025-10-21 19:14:29]     "pilotErrorCode": 0,
[2025-10-21 19:14:29]     "pilotErrorDiag": "",
[2025-10-21 19:14:29]  *** Listing of results directory ***
[2025-10-21 19:14:29] total 431140
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas    557409 Oct 21 08:31 pilot3.tar.gz
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas      5112 Oct 21 08:33 queuedata.json
[2025-10-21 19:14:29] -rwx------ 1 boincer umatlas     36292 Oct 21 08:34 runpilot2-wrapper.sh
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas       100 Oct 21 16:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 19:14:29] -rwxr-xr-x 1 boincer umatlas      7986 Oct 21 16:55 run_atlas
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas       105 Oct 21 16:55 job.xml
[2025-10-21 19:14:29] -rw-r--r-- 2 boincer umatlas 227421170 Oct 21 16:55 EVNT.46771634._002676.pool.root.1
[2025-10-21 19:14:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 16:55 start_atlas.sh
[2025-10-21 19:14:29] drwxrwx--x 2 boincer umatlas      4096 Oct 21 16:55 shared
[2025-10-21 19:14:29] -rw-r--r-- 2 boincer umatlas    569690 Oct 21 16:55 input.tar.gz
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas         0 Oct 21 16:55 boinc_lockfile
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas      2561 Oct 21 16:55 pandaJob.out
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas    978456 Oct 21 16:56 agis_schedconf.cvmfs.json
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas   1560740 Oct 21 16:56 agis_ddmendpoints.agis.ALL.json
[2025-10-21 19:14:29] drwx------ 5 boincer umatlas      4096 Oct 21 16:56 pilot3
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas 207087431 Oct 21 19:12 HITS.46771637._067554.pool.root.1
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas       529 Oct 21 19:13 boinc_task_state.xml
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas        95 Oct 21 19:13 pilot_heartbeat.json
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas      1064 Oct 21 19:13 memory_monitor_summary.json
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas    383116 Oct 21 19:13 log.46771637._067554.job.log.tgz.1
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas      7843 Oct 21 19:13 heartbeat.json
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas      5908 Oct 21 19:14 init_data.xml
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas        27 Oct 21 19:14 wrapper_checkpoint.txt
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas      8192 Oct 21 19:14 boinc_mmap_file
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas      4745 Oct 21 19:14 pilotlog.txt
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas   1152061 Oct 21 19:14 log.46771637._067554.job.log.1
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas       357 Oct 21 19:14 output.list
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas       620 Oct 21 19:14 runtime_log
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas   1556480 Oct 21 19:14 result.tar.gz
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas       660 Oct 21 19:14 xz8MDmxkQV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCY2NDm400CWm.diag
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas      8703 Oct 21 19:14 runtime_log.err
[2025-10-21 19:14:29] -rw-r--r-- 1 boincer umatlas     20851 Oct 21 19:14 stderr.txt
[2025-10-21 19:14:29] HITS file was successfully produced:
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas 207087431 Oct 21 19:12 shared/HITS.pool.root.1
[2025-10-21 19:14:29]  *** Contents of shared directory: ***
[2025-10-21 19:14:29] total 426432
[2025-10-21 19:14:29] -rw-r--r-- 2 boincer umatlas 227421170 Oct 21 16:55 ATLAS.root_0
[2025-10-21 19:14:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 16:55 start_atlas.sh
[2025-10-21 19:14:29] -rw-r--r-- 2 boincer umatlas    569690 Oct 21 16:55 input.tar.gz
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas 207087431 Oct 21 19:12 HITS.pool.root.1
[2025-10-21 19:14:29] -rw------- 1 boincer umatlas   1556480 Oct 21 19:14 result.tar.gz
19:14:30 (3462): run_atlas exited; CPU time 60920.498259
19:14:30 (3462): called boinc_finish(0)

</stderr_txt>
]]>

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