Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-22 06:16:56 (7412): vboxwrapper version 26210
2025-10-22 06:16:56 (7412): BOINC client version: 8.2.4
2025-10-22 06:16:56 (7412): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-10-22 06:16:56 (7412): Successfully copied 'init_data.xml' to the shared directory.
2025-10-22 06:16:57 (7412): Create VM. (boinc_e805bc4ae31d6596, slot#2)
2025-10-22 06:16:57 (7412): Setting Memory Size for VM. (4800MB)
2025-10-22 06:16:57 (7412): Setting CPU Count for VM. (8)
2025-10-22 06:16:58 (7412): Setting Chipset Options for VM.
2025-10-22 06:16:58 (7412): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-22 06:16:58 (7412): Setting Boot Options for VM.
2025-10-22 06:16:59 (7412): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-22 06:16:59 (7412): Enabling VM Network Access.
2025-10-22 06:16:59 (7412): Disabling USB Support for VM.
2025-10-22 06:17:00 (7412): Disabling COM Port Support for VM.
2025-10-22 06:17:00 (7412): Disabling LPT Port Support for VM.
2025-10-22 06:17:00 (7412): Disabling Audio Support for VM.
2025-10-22 06:17:00 (7412): Disabling Clipboard Support for VM.
2025-10-22 06:17:01 (7412): Disabling Drag and Drop Support for VM.
2025-10-22 06:17:01 (7412): Adding storage controller(s) to VM.
2025-10-22 06:17:01 (7412): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-22 06:17:02 (7412): Adding VirtualBox Guest Additions to VM.
2025-10-22 06:17:02 (7412): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-22 06:17:02 (7412): forwarding host port 55320 to guest port 80
2025-10-22 06:17:02 (7412): Enabling remote desktop for VM.
2025-10-22 06:17:03 (7412): Enabling shared directory for VM.
2025-10-22 06:17:04 (7412): Starting VM using VBoxManage interface. (boinc_e805bc4ae31d6596, slot#2)
2025-10-22 06:17:08 (7412): Successfully started VM. (PID = '9712')
2025-10-22 06:17:08 (7412): Reporting VM Process ID to BOINC.
2025-10-22 06:17:08 (7412): Guest Log: BIOS: VirtualBox 7.1.4
2025-10-22 06:17:08 (7412): Guest Log: CPUID EDX: 0x178bfbff
2025-10-22 06:17:08 (7412): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-22 06:17:09 (7412): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-22 06:17:09 (7412): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-22 06:17:09 (7412): Detected: Web Application Enabled (http://localhost:55320)
2025-10-22 06:17:09 (7412): Detected: Remote Desktop Enabled (localhost:55329)
2025-10-22 06:17:09 (7412): Preference change detected
2025-10-22 06:17:09 (7412): Setting CPU throttle for VM. (100%)
2025-10-22 06:17:09 (7412): Setting network throttle for VM. (1024KB)
2025-10-22 06:17:09 (7412): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-22 06:17:11 (7412): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-22 06:17:11 (7412): Guest Log: BIOS: Booting from Hard Disk...
2025-10-22 06:17:14 (7412): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-22 06:17:14 (7412): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-22 06:17:14 (7412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-22 06:17:18 (7412): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-22 06:17:18 (7412): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-22 06:17:23 (7412): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-22 06:17:23 (7412): Guest Log: 00:00:00.000127 main     Log opened 2025-10-22T06:17:19.868119000Z
2025-10-22 06:17:23 (7412): Guest Log: 00:00:00.000213 main     OS Product: Linux
2025-10-22 06:17:23 (7412): Guest Log: 00:00:00.000238 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-22 06:17:23 (7412): Guest Log: 00:00:00.000258 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-22 06:17:23 (7412): Guest Log: 00:00:00.000277 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-22 06:17:23 (7412): Guest Log: 00:00:00.000277 main     Process ID: 1379
2025-10-22 06:17:23 (7412): Guest Log: 00:00:00.000278 main     Package type: LINUX_64BITS_GENERIC
2025-10-22 06:17:23 (7412): Guest Log: 00:00:00.000885 main     5.2.32 r132073 started. Verbose level = 0
2025-10-22 06:17:23 (7412): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-22 06:17:23 (7412): Guest Log: [INFO] Mounting shared directory
2025-10-22 06:17:23 (7412): Guest Log: [INFO] Checking for init_data.xml
2025-10-22 06:17:26 (7412): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-22 06:17:26 (7412): Guest Log: [INFO] Detected branch: prod
2025-10-22 06:17:26 (7412): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-22 06:17:26 (7412): Guest Log: Copying input files
2025-10-22 06:17:27 (7412): Guest Log: Copied input files into RunAtlas.
2025-10-22 06:17:27 (7412): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.3:3128 - will set in /etc/cvmfs/default.local
2025-10-22 06:17:33 (7412): Guest Log: 00:00:10.004511 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 412 258 060 000ns (GuestNow=1 761 128 252 128 266 000 ns GuestLast=1 761 113 839 870 206 000 ns fSetTimeLastLoop=true )
2025-10-22 06:17:34 (7412): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-22 06:17:34 (7412): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-22 06:17:34 (7412): Guest Log: 2.6.3.0 1658 0 29596 151992 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.3:3128 1
2025-10-22 06:17:34 (7412): Guest Log: copied the webapp to /var/www
2025-10-22 06:17:34 (7412): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-22 06:17:34 (7412): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-22 06:17:34 (7412): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-22 06:17:34 (7412): Guest Log:  *** Starting ATLAS job. (PandaID=6853059484 taskID=46771637) ***
2025-10-22 07:42:30 (7412): Guest Log:  *** Job finished ***
2025-10-22 07:42:30 (7412): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:41:58,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:41:58,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:19,794 | INFO     | [monitor] cgroup control has ended
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:21,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099260901184)>', '<ExcThread(monitor, started 140098586789632)>']
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:21,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:21,688 | INFO     | [monitor] control thread has ended
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,437 | INFO     | all workflow threads have been joined
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,438 | INFO     | end of generic workflow (traces error code: 0)
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,438 | INFO     | traces error code: 0
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,505 [wrapper] ==== pilot stdout END ====
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,511 [wrapper] ==== wrapper stdout RESUME ====
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,516 [wrapper] pilotpid: 6070
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,521 [wrapper] Pilot exit status: 0
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,647 [wrapper] pandaids: 6853059484
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,682 [wrapper] cleanup supervisor_pilot 25068 6071
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,687 [wrapper] Test setup, not cleaning
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,692 [wrapper] apfmon messages muted
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,696 [wrapper] ==== wrapper stdout END ====
2025-10-22 07:42:30 (7412): Guest Log: 2025-10-22 11:42:26,701 [wrapper] ==== wrapper stderr END ====
2025-10-22 07:42:30 (7412): Guest Log:  *** Error codes and diagnostics ***
2025-10-22 07:42:30 (7412): Guest Log:     "exeErrorCode": 0,
2025-10-22 07:42:30 (7412): Guest Log:     "exeErrorDiag": "",
2025-10-22 07:42:30 (7412): Guest Log:     "pilotErrorCode": 0,
2025-10-22 07:42:30 (7412): Guest Log:     "pilotErrorDiag": "",
2025-10-22 07:42:30 (7412): Guest Log:  *** Listing of results directory ***
2025-10-22 07:42:30 (7412): Guest Log: total 204508
2025-10-22 07:42:30 (7412): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 21 12:31 pilot3.tar.gz
2025-10-22 07:42:30 (7412): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 21 13:12 queuedata.json
2025-10-22 07:42:30 (7412): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 21 13:15 runpilot2-wrapper.sh
2025-10-22 07:42:30 (7412): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 22 10:17 start_atlas.sh
2025-10-22 07:42:30 (7412): Guest Log: -rwxr-xr-x. 1 atlas atlas    569670 Oct 22 10:17 input.tar.gz
2025-10-22 07:42:30 (7412): Guest Log: -rwxr-xr-x. 1 atlas atlas      9296 Oct 22 10:17 init_data.xml
2025-10-22 07:42:30 (7412): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 10:17 EVNT.46771634._002703.pool.root.1 -> /data/./ATLAS.root_0
2025-10-22 07:42:30 (7412): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Oct 22 10:17 pandaJob.out
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas    976986 Oct 22 10:18 agis_schedconf.cvmfs.json
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 22 10:18 agis_ddmendpoints.agis.ALL.json
2025-10-22 07:42:30 (7412): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 10:18 pilot3
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas 203571208 Oct 22 11:40 HITS.46771637._068113.pool.root.1
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas      1037 Oct 22 11:41 memory_monitor_summary.json
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 11:41 pilot_heartbeat.json
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas    314942 Oct 22 11:41 log.46771637._068113.job.log.tgz.1
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas      7787 Oct 22 11:41 heartbeat.json
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 22 11:42 pilotlog.txt
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas    691749 Oct 22 11:42 log.46771637._068113.job.log.1
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 11:42 output.list
2025-10-22 07:42:30 (7412): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 11:42 runtime_log
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas   1024000 Oct 22 11:42 result.tar.gz
2025-10-22 07:42:30 (7412): Guest Log: -rw-r--r--. 1 atlas atlas      8635 Oct 22 11:42 runtime_log.err
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas       656 Oct 22 11:42 bZNLDmtNRV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmeefMDmB30Can.diag
2025-10-22 07:42:30 (7412): Guest Log: Looking for outputfile HITS.46771637._068113.pool.root.1
2025-10-22 07:42:30 (7412): Guest Log: HITS file was successfully produced
2025-10-22 07:42:30 (7412): Guest Log: -rw-------. 1 atlas atlas 203571208 Oct 22 11:40 /home/atlas/RunAtlas/HITS.46771637._068113.pool.root.1
2025-10-22 07:42:30 (7412): Guest Log: Successfully finished the ATLAS job!
2025-10-22 07:42:30 (7412): Guest Log: Copying the results back to the shared directory!
2025-10-22 07:42:30 (7412): Guest Log:  *** Contents of shared directory: ***
2025-10-22 07:42:30 (7412): Guest Log: total 421864
2025-10-22 07:42:30 (7412): Guest Log: -rwxrwxrwx. 1 root root 226785470 Oct 22 10:16 ATLAS.root_0
2025-10-22 07:42:30 (7412): Guest Log: -rwxrwxrwx. 1 root root 203571208 Oct 22  2025 HITS.pool.root.1
2025-10-22 07:42:30 (7412): Guest Log: -rwxrwxrwx. 1 root root      9296 Oct 22 10:16 init_data.xml
2025-10-22 07:42:30 (7412): Guest Log: -rwxrwxrwx. 1 root root    569670 Oct 21 21:01 input.tar.gz
2025-10-22 07:42:30 (7412): Guest Log: -rwxrwxrwx. 1 root root   1024000 Oct 22  2025 result.tar.gz
2025-10-22 07:42:30 (7412): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 21 21:01 start_atlas.sh
2025-10-22 07:42:30 (7412): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-22 07:42:30 (7412): VM Completion File Detected.
2025-10-22 07:42:30 (7412): Powering off VM.
2025-10-22 07:42:31 (7412): Successfully stopped VM.
2025-10-22 07:42:31 (7412): Deregistering VM. (boinc_e805bc4ae31d6596, slot#2)
2025-10-22 07:42:31 (7412): Removing network bandwidth throttle group from VM.
2025-10-22 07:42:31 (7412): Removing VM from VirtualBox.
2025-10-22 07:42:37 (7412): called boinc_finish(0)

</stderr_txt>
]]>

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