Name 16LLDmfYCV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQkdMDmNYcCom_4
Workunit 236809136
Created 21 Oct 2025, 18:27:47 UTC
Sent 21 Oct 2025, 20:42:52 UTC
Report deadline 29 Oct 2025, 20:42:52 UTC
Received 21 Oct 2025, 23:31:58 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10962679
Run time 50 min 40 sec
CPU time 6 hours 0 min 57 sec
Validate state Valid
Credit 56.31
Device peak FLOPS 8.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.91 GB
Peak swap size 3.01 GB
Peak disk usage 635.45 MB

Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
00:40:22 (6543): wrapper (7.7.26015): starting
00:40:22 (6543): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 00:40:22] Arguments: --nthreads 8
[2025-10-22 00:40:22] Threads: 8
[2025-10-22 00:40:22] Checking for CVMFS
[2025-10-22 00:40:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 00:40:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 00:40:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 00:40:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 00:40:23] 2.11.0.0 4497 14325 95220 151974 0 133 2214030 4096001 1834 130560 0 10235292 99.726 5443212 1361 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-22 00:40:23] CVMFS is ok
[2025-10-22 00:40:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 00:40:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 00:40:23] Further information can be found at the LHC@home message board.
[2025-10-22 00:40:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 00:40:23] Checking for apptainer binary...
[2025-10-22 00:40:23] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-22 00:40:23] apptainer is not installed, using version from CVMFS
[2025-10-22 00:40:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 00:40:23] WARNING: Environment variable TMPDIR already has value [/tmp/job_10702254/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node006
[2025-10-22 00:40:23] apptainer works
[2025-10-22 00:40:23] Set ATHENA_PROC_NUMBER=8
[2025-10-22 00:40:23] Set ATHENA_CORE_NUMBER=8
[2025-10-22 00:40:23] Starting ATLAS job with PandaID=6852940165
[2025-10-22 00:40:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10702254/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 01:30:59]  *** The last 200 lines of the pilot log: ***
[2025-10-22 01:30:59] 2025-10-21 23:30:23,608 | INFO     | adding to output.list: log.46771637._050643.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/74/log.46771637._050643.job.log.tg
[2025-10-22 01:30:59] 2025-10-21 23:30:23,608 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-22 01:30:59] 2025-10-21 23:30:23,608 | INFO     | summary of transferred files:
[2025-10-22 01:30:59] 2025-10-21 23:30:23,608 | INFO     |  -- lfn=log.46771637._050643.job.log.tgz.1, status_code=0, status=transferred
[2025-10-22 01:30:59] 2025-10-21 23:30:23,608 | INFO     | stage-out finished correctly
[2025-10-22 01:30:59] 2025-10-21 23:30:23,660 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-22 01:30:59] 2025-10-21 23:30:23,724 | WARNING  | process 17103 can no longer be monitored (due to stat problems) - aborting
[2025-10-22 01:30:59] 2025-10-21 23:30:23,724 | INFO     | using path: /tmp/job_10702254/atlas/pilot/slots/0/PanDA_Pilot-6852940165/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 01:30:59] 2025-10-21 23:30:23,724 | INFO     | using path: /tmp/job_10702254/atlas/pilot/slots/0/PanDA_Pilot-6852940165/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 01:30:59] 2025-10-21 23:30:23,725 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-22 01:30:59] 2025-10-21 23:30:23,725 | WARNING  | maxPSS not found in memory monitor output
[2025-10-22 01:30:59] 2025-10-21 23:30:23,725 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3178866 B
[2025-10-22 01:30:59] 2025-10-21 23:30:23,725 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15570 B
[2025-10-22 01:30:59] 2025-10-21 23:30:23,725 | INFO     | executing command: df -mP /tmp/job_10702254/atlas/pilot/slots/0
[2025-10-22 01:30:59] 2025-10-21 23:30:23,732 | INFO     | sufficient remaining disk space (224952057856 B)
[2025-10-22 01:30:59] 2025-10-21 23:30:23,732 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-22 01:30:59] 2025-10-21 23:30:23,732 | INFO     | size of work directory /tmp/job_10702254/atlas/pilot/slots/0/PanDA_Pilot-6852940165: 3471875 B (within 2537553920 B limit)
[2025-10-22 01:30:59] 2025-10-21 23:30:23,732 | INFO     | pfn file=/tmp/job_10702254/atlas/pilot/slots/0/PanDA_Pilot-6852940165/HITS.46771637._050643.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-22 01:30:59] 2025-10-21 23:30:23,732 | INFO     | total size of present files: 0 B (workdir size: 3471875 B)
[2025-10-22 01:30:59] 2025-10-21 23:30:23,732 | INFO     | output file size check: skipping output file /tmp/job_10702254/atlas/pilot/slots/0/PanDA_Pilot-6852940165/HITS.46771637._050643.pool.root.1 since it does not exist
[2025-10-22 01:30:59] 2025-10-21 23:30:23,836 | INFO     | number of running child processes to parent process 17103: 1
[2025-10-22 01:30:59] 2025-10-21 23:30:23,836 | INFO     | maximum number of monitored processes: 6
[2025-10-22 01:30:59] 2025-10-21 23:30:24,347 | INFO     | time since job start (2996s) is within the limit (172800.0s)
[2025-10-22 01:30:59] 2025-10-21 23:30:25,649 | INFO     | job 6852940165 has state=finished
[2025-10-22 01:30:59] 2025-10-21 23:30:25,649 | INFO     | preparing for final server update for job 6852940165 in state='finished'
[2025-10-22 01:30:59] 2025-10-21 23:30:25,650 | INFO     | this job has now completed (state=finished)
[2025-10-22 01:30:59] 2025-10-21 23:30:25,650 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-22 01:30:59] 2025-10-21 23:30:25,650 | INFO     | log transfer has been attempted: DONE
[2025-10-22 01:30:59] 2025-10-21 23:30:25,650 | INFO     | job 6852940165 has finished - writing final server update
[2025-10-22 01:30:59] 2025-10-21 23:30:25,650 | INFO     | total number of processed events: 400 (read)
[2025-10-22 01:30:59] 2025-10-21 23:30:25,650 | INFO     | executing command: lscpu
[2025-10-22 01:30:59] 2025-10-21 23:30:25,682 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-22 01:30:59] 2025-10-21 23:30:26,339 | INFO     | monitor loop #223: job 0:6852940165 is in state 'finished'
[2025-10-22 01:30:59] 2025-10-21 23:30:26,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 01:30:59] 2025-10-21 23:30:26,352 | INFO     | time since job start (2998s) is within the limit (172800.0s)
[2025-10-22 01:30:59] 2025-10-21 23:30:27,304 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-22 01:30:59] 2025-10-21 23:30:27,308 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2739.8170781249996
[2025-10-22 01:30:59] 2025-10-21 23:30:27,313 | INFO     | using path: /tmp/job_10702254/atlas/pilot/slots/0/PanDA_Pilot-6852940165/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 01:30:59] 2025-10-21 23:30:27,314 | INFO     | extracted standard info from prmon json
[2025-10-22 01:30:59] 2025-10-21 23:30:27,314 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 01:30:59] 2025-10-21 23:30:27,314 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 01:30:59] 2025-10-21 23:30:27,314 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 01:30:59] 2025-10-21 23:30:27,314 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | fitting pss+swap vs Time
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | sum of square deviations: 22960430.5
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | sum of deviations: -443540089.0
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | mean x: 1761088000.5
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | mean y: 2574081.619047619
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | -- intersect: 34022542848.25877
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | intersect: 34022542848.25877
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | chi2: 0.005312066426257495
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | -- intersect: 34022542848.25877
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | current memory leak: -19.32 B/s (using 42 data points, chi2=0.01)
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | could have reported an average CPU frequency of 2709 MHz (5 samples)
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | ..............................
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | . Timing measurements:
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | . get job = 0 s
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | . initial setup = 1 s
[2025-10-22 01:30:59] 2025-10-21 23:30:27,315 | INFO     | . payload setup = 2 s
[2025-10-22 01:30:59] 2025-10-21 23:30:27,316 | INFO     | . stage-in = 0 s
[2025-10-22 01:30:59] 2025-10-21 23:30:27,316 | INFO     | . payload execution = 2975 s
[2025-10-22 01:30:59] 2025-10-21 23:30:27,316 | INFO     | . stage-out = 0 s
[2025-10-22 01:30:59] 2025-10-21 23:30:27,316 | INFO     | . log creation = 0 s
[2025-10-22 01:30:59] 2025-10-21 23:30:27,316 | INFO     | ..............................
[2025-10-22 01:30:59] 2025-10-21 23:30:27,749 | INFO     | 
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | job summary report
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | --------------------------------------------------
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | PanDA job id: 6852940165
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | task id: 46771637
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | errors: (none)
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | pilot state: finished 
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | transexitcode: 0
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | exeerrorcode: 0
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | exeerrordiag: 
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | exitcode: 0
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | exitmsg: OK
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | cpuconsumptiontime: 21608 s
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | nevents: 400
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | neventsw: 0
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | pid: 17103
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | pgrp: 17103
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | corecount: 8
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | event service: False
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | sizes: {0: 2349057, 2: 2349319, 11: 2349347, 2981: 2374869, 2982: 2374868, 2983: 2384136, 2987: 2384334}
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | --------------------------------------------------
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | 
[2025-10-22 01:30:59] 2025-10-21 23:30:27,750 | INFO     | executing command: ls -lF /tmp/job_10702254/atlas/pilot/slots/0
[2025-10-22 01:30:59] 2025-10-21 23:30:27,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,759 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | job 6852940165 has completed (purged errors)
[2025-10-22 01:30:59] 2025-10-21 23:30:27,760 | INFO     | overall cleanup function is called
[2025-10-22 01:30:59] 2025-10-21 23:30:28,766 | INFO     | --- collectZombieJob: --- 10, [17103]
[2025-10-22 01:30:59] 2025-10-21 23:30:28,766 | INFO     | zombie collector waiting for pid 17103
[2025-10-22 01:30:59] 2025-10-21 23:30:28,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 01:30:59] 2025-10-21 23:30:28,766 | INFO     | collected zombie processes
[2025-10-22 01:30:59] 2025-10-21 23:30:28,766 | INFO     | will attempt to kill all subprocesses of pid=17103
[2025-10-22 01:30:59] 2025-10-21 23:30:28,869 | INFO     | process IDs to be killed: [17103] (in reverse order)
[2025-10-22 01:30:59] 2025-10-21 23:30:28,904 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 01:30:59] 2025-10-21 23:30:28,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 01:30:59] 2025-10-21 23:30:28,908 | INFO     | did not find any defunct processes belonging to 17103
[2025-10-22 01:30:59] 2025-10-21 23:30:28,911 | INFO     | did not find any defunct processes belonging to 17103
[2025-10-22 01:30:59] 2025-10-21 23:30:28,912 | INFO     | ready for new job
[2025-10-22 01:30:59] 2025-10-21 23:30:28,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 01:30:59] 2025-10-21 23:30:28,912 | INFO     | ***************************************
[2025-10-22 01:30:59] 2025-10-21 23:30:28,912 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 01:30:59] 2025-10-21 23:30:28,912 | INFO     | ***************************************
[2025-10-22 01:30:59] 2025-10-21 23:30:28,912 | INFO     | 
[2025-10-22 01:30:59] 2025-10-21 23:30:28,927 | INFO     | architecture information:
[2025-10-22 01:30:59] 2025-10-21 23:30:28,927 | INFO     | executing command: cat /etc/os-release
[2025-10-22 01:30:59] 2025-10-21 23:30:28,933 | INFO     | cat /etc/os-release:
[2025-10-22 01:30:59] NAME="CentOS Linux"
[2025-10-22 01:30:59] VERSION="7 (Core)"
[2025-10-22 01:30:59] ID="centos"
[2025-10-22 01:30:59] ID_LIKE="rhel fedora"
[2025-10-22 01:30:59] VERSION_ID="7"
[2025-10-22 01:30:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 01:30:59] ANSI_COLOR="0;31"
[2025-10-22 01:30:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 01:30:59] HOME_URL="https://www.centos.org/"
[2025-10-22 01:30:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 01:30:59] 
[2025-10-22 01:30:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 01:30:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 01:30:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 01:30:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 01:30:59] 
[2025-10-22 01:30:59] 2025-10-21 23:30:28,933 | INFO     | ***************************************
[2025-10-22 01:30:59] 2025-10-21 23:30:29,435 | INFO     | executing command: df -mP /tmp/job_10702254/atlas/pilot/slots/0
[2025-10-22 01:30:59] 2025-10-21 23:30:29,441 | INFO     | sufficient remaining disk space (224953106432 B)
[2025-10-22 01:30:59] 2025-10-21 23:30:29,441 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 01:30:59] 2025-10-21 23:30:29,441 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 01:30:59] 2025-10-21 23:30:29,441 | INFO     | update_server=False
[2025-10-22 01:30:59] 2025-10-21 23:30:29,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 01:30:59] 2025-10-21 23:30:29,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 01:30:59] 2025-10-21 23:30:29,686 | INFO     | all payload control threads have been joined
[2025-10-22 01:30:59] 2025-10-21 23:30:29,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 01:30:59] 2025-10-21 23:30:29,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 01:30:59] 2025-10-21 23:30:29,852 | INFO     | aborting loop
[2025-10-22 01:30:59] 2025-10-21 23:30:30,441 | INFO     | all data control threads have been joined
[2025-10-22 01:30:59] 2025-10-21 23:30:30,446 | INFO     | [job] retrieve thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:30,490 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:30,577 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:30,667 | INFO     | [data] copytool_in thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:30,691 | INFO     | [payload] control thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:30,857 | INFO     | [job] job monitor thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:30,865 | INFO     | [payload] failed_post thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:31,094 | INFO     | all job control threads have been joined
[2025-10-22 01:30:59] 2025-10-21 23:30:31,446 | INFO     | [data] copytool_out thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:31,447 | INFO     | [data] control thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:31,484 | INFO     | [payload] validate_post thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:31,896 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:31,896 | INFO     | [job] validate thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:32,099 | INFO     | [job] control thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:32,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 01:30:59] 2025-10-21 23:30:32,630 | INFO     | [monitor] cgroup control has ended
[2025-10-22 01:30:59] 2025-10-21 23:30:33,381 | INFO     | [job] queue monitor thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:33,717 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:40,324 | INFO     | job.realtimelogging is not enabled
[2025-10-22 01:30:59] 2025-10-21 23:30:41,329 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 01:30:59] 2025-10-21 23:30:42,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456056264448)>']
[2025-10-22 01:30:59] 2025-10-21 23:30:47,809 | INFO     | all workflow threads have been joined
[2025-10-22 01:30:59] 2025-10-21 23:30:47,809 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 01:30:59] 2025-10-21 23:30:47,809 | INFO     | traces error code: 0
[2025-10-22 01:30:59] 2025-10-21 23:30:47,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 01:30:59] 2025-10-21 23:30:59,553 | INFO     | PID=10316 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-22 01:30:59] 2025-10-21 23:30:59,553 | INFO     | .. there are 5 such processes running
[2025-10-22 01:30:59] 2025-10-21 23:30:59,553 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 01:30:59] 2025-10-21 23:30:59,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 01:30:59] 2025-10-21 23:30:59,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 01:30:59] 2025-10-21 23:30:59,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 01:30:59] 2025-10-21 23:30:59,553 | INFO     | [monitor] control thread has ended
[2025-10-22 01:30:59] 2025-10-21 23:30:59,605 [wrapper] ==== pilot stdout END ====
[2025-10-22 01:30:59] 2025-10-21 23:30:59,606 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 01:30:59] 2025-10-21 23:30:59,607 [wrapper] pilotpid: 10316
[2025-10-22 01:30:59] 2025-10-21 23:30:59,608 [wrapper] Pilot exit status: 0
[2025-10-22 01:30:59] 2025-10-21 23:30:59,612 [wrapper] pandaids: 6852940165
[2025-10-22 01:30:59] 2025-10-21 23:30:59,635 [wrapper] cleanup supervisor_pilot 22184 10317
[2025-10-22 01:30:59] 2025-10-21 23:30:59,636 [wrapper] Test setup, not cleaning
[2025-10-22 01:30:59] 2025-10-21 23:30:59,637 [wrapper] apfmon messages muted
[2025-10-22 01:30:59] 2025-10-21 23:30:59,638 [wrapper] ==== wrapper stdout END ====
[2025-10-22 01:30:59] 2025-10-21 23:30:59,639 [wrapper] ==== wrapper stderr END ====
[2025-10-22 01:30:59]  *** Error codes and diagnostics ***
[2025-10-22 01:30:59]     "exeErrorCode": 0,
[2025-10-22 01:30:59]     "exeErrorDiag": "",
[2025-10-22 01:30:59]     "pilotErrorCode": 0,
[2025-10-22 01:30:59]     "pilotErrorDiag": "",
[2025-10-22 01:30:59]  *** Listing of results directory ***
[2025-10-22 01:30:59] total 428644
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user    557409 Oct 20 22:52 pilot3.tar.gz
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user      5112 Oct 20 23:22 queuedata.json
[2025-10-22 01:30:59] -rwx------ 1 mf493845 unix-user     36292 Oct 20 23:25 runpilot2-wrapper.sh
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user       100 Oct 21 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 01:30:59] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 21 23:41 run_atlas
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user       105 Oct 21 23:41 job.xml
[2025-10-22 01:30:59] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 22 00:40 start_atlas.sh
[2025-10-22 01:30:59] drwxrwx--x 2 mf493845 unix-user       100 Oct 22 00:40 shared
[2025-10-22 01:30:59] -rw-r--r-- 2 mf493845 unix-user    569679 Oct 22 00:40 input.tar.gz
[2025-10-22 01:30:59] -rw-r--r-- 2 mf493845 unix-user 229646723 Oct 22 00:40 EVNT.46771634._002029.pool.root.1
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user         0 Oct 22 00:40 boinc_setup_complete
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user      6392 Oct 22 00:40 init_data.xml
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user      8192 Oct 22 00:40 boinc_mmap_file
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user         0 Oct 22 00:40 boinc_lockfile
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user      2560 Oct 22 00:40 pandaJob.out
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user    978456 Oct 22 00:40 agis_schedconf.cvmfs.json
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user   1560740 Oct 22 00:40 agis_ddmendpoints.agis.ALL.json
[2025-10-22 01:30:59] drwx------ 5 mf493845 unix-user       440 Oct 22 00:40 pilot3
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user 203867343 Oct 22 01:29 HITS.46771637._050643.pool.root.1
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user        95 Oct 22 01:30 pilot_heartbeat.json
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user      1016 Oct 22 01:30 memory_monitor_summary.json
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user    296126 Oct 22 01:30 log.46771637._050643.job.log.tgz.1
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user      7769 Oct 22 01:30 heartbeat.json
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user       820 Oct 22 01:30 pilotlog.txt
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user    474140 Oct 22 01:30 log.46771637._050643.job.log.1
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user       357 Oct 22 01:30 output.list
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user       620 Oct 22 01:30 runtime_log
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user    788480 Oct 22 01:30 result.tar.gz
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user      9076 Oct 22 01:30 runtime_log.err
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user       643 Oct 22 01:30 16LLDmfYCV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQkdMDmNYcCom.diag
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user     23052 Oct 22 01:30 stderr.txt
[2025-10-22 01:30:59] HITS file was successfully produced:
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user 203867343 Oct 22 01:29 shared/HITS.pool.root.1
[2025-10-22 01:30:59]  *** Contents of shared directory: ***
[2025-10-22 01:30:59] total 424708
[2025-10-22 01:30:59] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 22 00:40 start_atlas.sh
[2025-10-22 01:30:59] -rw-r--r-- 2 mf493845 unix-user    569679 Oct 22 00:40 input.tar.gz
[2025-10-22 01:30:59] -rw-r--r-- 2 mf493845 unix-user 229646723 Oct 22 00:40 ATLAS.root_0
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user 203867343 Oct 22 01:29 HITS.pool.root.1
[2025-10-22 01:30:59] -rw------- 1 mf493845 unix-user    788480 Oct 22 01:30 result.tar.gz
01:31:01 (6543): run_atlas exited; CPU time 21652.006193
01:31:01 (6543): called boinc_finish(0)

</stderr_txt>
]]>


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