Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-21 13:39:01 (4508): vboxwrapper version 26210
2025-10-21 13:39:01 (4508): BOINC client version: 8.0.2
2025-10-21 13:39:02 (4508): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-10-21 13:39:02 (4508): Successfully copied 'init_data.xml' to the shared directory.
2025-10-21 13:39:03 (4508): Create VM. (boinc_ecf19aa63f23cb67, slot#6)
2025-10-21 13:39:03 (4508): Setting Memory Size for VM. (4600MB)
2025-10-21 13:39:03 (4508): Setting CPU Count for VM. (6)
2025-10-21 13:39:04 (4508): Setting Chipset Options for VM.
2025-10-21 13:39:04 (4508): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-21 13:39:04 (4508): Setting Boot Options for VM.
2025-10-21 13:39:05 (4508): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-21 13:39:05 (4508): Enabling VM Network Access.
2025-10-21 13:39:05 (4508): Disabling USB Support for VM.
2025-10-21 13:39:06 (4508): Disabling COM Port Support for VM.
2025-10-21 13:39:06 (4508): Disabling LPT Port Support for VM.
2025-10-21 13:39:06 (4508): Disabling Audio Support for VM.
2025-10-21 13:39:06 (4508): Disabling Clipboard Support for VM.
2025-10-21 13:39:07 (4508): Disabling Drag and Drop Support for VM.
2025-10-21 13:39:07 (4508): Adding storage controller(s) to VM.
2025-10-21 13:39:07 (4508): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-21 13:39:08 (4508): Adding VirtualBox Guest Additions to VM.
2025-10-21 13:39:08 (4508): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-21 13:39:08 (4508): forwarding host port 12492 to guest port 80
2025-10-21 13:39:09 (4508): Enabling remote desktop for VM.
2025-10-21 13:39:09 (4508): Required extension pack not installed, remote desktop not enabled.
2025-10-21 13:39:09 (4508): Enabling shared directory for VM.
2025-10-21 13:39:09 (4508): Starting VM using VBoxManage interface. (boinc_ecf19aa63f23cb67, slot#6)
2025-10-21 13:39:18 (4508): Successfully started VM. (PID = '10592')
2025-10-21 13:39:18 (4508): Reporting VM Process ID to BOINC.
2025-10-21 13:39:18 (4508): Guest Log: BIOS: VirtualBox 6.0.14
2025-10-21 13:39:18 (4508): Guest Log: CPUID EDX: 0x178bfbff
2025-10-21 13:39:18 (4508): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-21 13:39:18 (4508): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-21 13:39:18 (4508): Detected: Web Application Enabled (http://localhost:12492)
2025-10-21 13:39:18 (4508): Preference change detected
2025-10-21 13:39:18 (4508): Setting CPU throttle for VM. (100%)
2025-10-21 13:39:19 (4508): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-21 13:39:20 (4508): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-21 13:39:20 (4508): Guest Log: BIOS: Booting from Hard Disk...
2025-10-21 13:39:24 (4508): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-21 13:39:24 (4508): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-21 13:39:24 (4508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-21 13:39:38 (4508): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-21 13:39:38 (4508): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-21 13:39:55 (4508): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-21 13:39:55 (4508): Guest Log: 00:00:00.000435 main     Log opened 2025-10-21T13:39:53.468970000Z
2025-10-21 13:39:55 (4508): Guest Log: 00:00:00.000670 main     OS Product: Linux
2025-10-21 13:39:55 (4508): Guest Log: 00:00:00.000760 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-21 13:39:55 (4508): Guest Log: 00:00:00.000842 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-21 13:39:55 (4508): Guest Log: 00:00:00.000939 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-21 13:39:55 (4508): Guest Log: 00:00:00.000942 main     Process ID: 1335
2025-10-21 13:39:55 (4508): Guest Log: 00:00:00.000944 main     Package type: LINUX_64BITS_GENERIC
2025-10-21 13:39:55 (4508): Guest Log: 00:00:00.002900 main     5.2.32 r132073 started. Verbose level = 0
2025-10-21 13:39:55 (4508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-21 13:39:55 (4508): Guest Log: [INFO] Mounting shared directory
2025-10-21 13:39:55 (4508): Guest Log: [INFO] Checking for init_data.xml
2025-10-21 13:40:02 (4508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-21 13:40:02 (4508): Guest Log: [INFO] Detected branch: prod
2025-10-21 13:40:02 (4508): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-21 13:40:02 (4508): Guest Log: Copying input files
2025-10-21 13:40:05 (4508): Guest Log: 00:00:10.006179 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 853 348 000ns (GuestNow=1 761 079 205 327 499 000 ns GuestLast=1 761 053 993 474 151 000 ns fSetTimeLastLoop=true )
2025-10-21 13:40:09 (4508): Guest Log: Copied input files into RunAtlas.
2025-10-21 13:40:09 (4508): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-21 13:40:09 (4508): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-21 13:40:09 (4508): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-21 13:40:09 (4508): Guest Log: Further information can be found at the LHC@home message board.
2025-10-21 13:40:45 (4508): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-21 13:40:46 (4508): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-21 13:40:46 (4508): Guest Log: 2.6.3.0 1619 0 30128 151970 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-21 13:40:49 (4508): Guest Log: copied the webapp to /var/www
2025-10-21 13:40:49 (4508): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-21 13:40:49 (4508): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-21 13:40:49 (4508): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-21 13:40:49 (4508): Guest Log:  *** Starting ATLAS job. (PandaID=6853112750 taskID=46771637) ***
2025-10-21 15:19:25 (4508): Status Report: Elapsed Time: '6000.000000'
2025-10-21 15:19:25 (4508): Status Report: CPU Time: '28472.531250'
2025-10-21 16:59:32 (4508): Status Report: Elapsed Time: '12000.000000'
2025-10-21 16:59:32 (4508): Status Report: CPU Time: '63997.515625'
2025-10-21 18:39:38 (4508): Status Report: Elapsed Time: '18000.000000'
2025-10-21 18:39:38 (4508): Status Report: CPU Time: '99296.453125'
2025-10-21 20:19:43 (4508): Status Report: Elapsed Time: '24000.000000'
2025-10-21 20:19:43 (4508): Status Report: CPU Time: '134615.734375'
2025-10-21 21:59:50 (4508): Status Report: Elapsed Time: '30000.000000'
2025-10-21 21:59:50 (4508): Status Report: CPU Time: '169853.046875'
2025-10-21 22:35:51 (4508): Guest Log:  *** Job finished ***
2025-10-21 22:35:51 (4508): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:15,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:15,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:42,904 | INFO     | [monitor] cgroup control has ended
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:44,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140323677329216)>', '<ExcThread(monitor, started 140322839435008)>']
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:44,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:44,433 | INFO     | [monitor] control thread has ended
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,199 | INFO     | all workflow threads have been joined
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,199 | INFO     | end of generic workflow (traces error code: 0)
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,200 | INFO     | traces error code: 0
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,503 [wrapper] ==== pilot stdout END ====
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,534 [wrapper] ==== wrapper stdout RESUME ====
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,559 [wrapper] pilotpid: 6050
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,585 [wrapper] Pilot exit status: 0
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,711 [wrapper] pandaids: 6853112750
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,898 [wrapper] cleanup supervisor_pilot  8931 6051
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,948 [wrapper] Test setup, not cleaning
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:49,993 [wrapper] apfmon messages muted
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:50,012 [wrapper] ==== wrapper stdout END ====
2025-10-21 22:35:51 (4508): Guest Log: 2025-10-22 05:35:50,057 [wrapper] ==== wrapper stderr END ====
2025-10-21 22:35:51 (4508): Guest Log:  *** Error codes and diagnostics ***
2025-10-21 22:35:51 (4508): Guest Log:     "exeErrorCode": 0,
2025-10-21 22:35:51 (4508): Guest Log:     "exeErrorDiag": "",
2025-10-21 22:35:51 (4508): Guest Log:     "pilotErrorCode": 0,
2025-10-21 22:35:51 (4508): Guest Log:     "pilotErrorDiag": "",
2025-10-21 22:35:51 (4508): Guest Log:  *** Listing of results directory ***
2025-10-21 22:35:51 (4508): Guest Log: total 206932
2025-10-21 22:35:51 (4508): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 21 15:23 pilot3.tar.gz
2025-10-21 22:35:51 (4508): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 21 15:44 queuedata.json
2025-10-21 22:35:51 (4508): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 21 15:45 runpilot2-wrapper.sh
2025-10-21 22:35:51 (4508): Guest Log: -rwxr-xr-x. 1 atlas atlas      9204 Oct 21 20:40 init_data.xml
2025-10-21 22:35:51 (4508): Guest Log: -rwxr-xr-x. 1 atlas atlas    569678 Oct 21 20:40 input.tar.gz
2025-10-21 22:35:51 (4508): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 21 20:40 start_atlas.sh
2025-10-21 22:35:51 (4508): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 21 20:40 EVNT.46771634._002791.pool.root.1 -> /data/./ATLAS.root_0
2025-10-21 22:35:51 (4508): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 21 20:40 pandaJob.out
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas    978456 Oct 21 20:41 agis_schedconf.cvmfs.json
2025-10-21 22:35:51 (4508): Guest Log: drwx------. 5 atlas atlas      4096 Oct 21 20:42 pilot3
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas 198593456 Oct 22 05:32 HITS.46771637._070182.pool.root.1
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas      1030 Oct 22 05:33 memory_monitor_summary.json
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 22 05:33 agis_ddmendpoints.agis.ALL.json
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas    657363 Oct 22 05:33 log.46771637._070182.job.log.tgz.1
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas      7834 Oct 22 05:34 heartbeat.json
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 05:34 pilot_heartbeat.json
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 22 05:35 pilotlog.txt
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas   4076582 Oct 22 05:35 log.46771637._070182.job.log.1
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 05:35 output.list
2025-10-21 22:35:51 (4508): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 05:35 runtime_log
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas   4751360 Oct 22 05:35 result.tar.gz
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas       669 Oct 22 05:35 tOcKDmyiTV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyqfMDmvton2n.diag
2025-10-21 22:35:51 (4508): Guest Log: -rw-r--r--. 1 atlas atlas      8667 Oct 22 05:35 runtime_log.err
2025-10-21 22:35:51 (4508): Guest Log: Looking for outputfile HITS.46771637._070182.pool.root.1
2025-10-21 22:35:51 (4508): Guest Log: HITS file was successfully produced
2025-10-21 22:35:51 (4508): Guest Log: -rw-------. 1 atlas atlas 198593456 Oct 22 05:32 /home/atlas/RunAtlas/HITS.46771637._070182.pool.root.1
2025-10-21 22:35:56 (4508): Guest Log: Successfully finished the ATLAS job!
2025-10-21 22:35:56 (4508): Guest Log: Copying the results back to the shared directory!
2025-10-21 22:35:56 (4508): Guest Log:  *** Contents of shared directory: ***
2025-10-21 22:35:57 (4508): Guest Log: total 421212
2025-10-21 22:35:57 (4508): Guest Log: -rwxrwxrwx. 1 root root 227372076 Oct 21 20:39 ATLAS.root_0
2025-10-21 22:35:57 (4508): Guest Log: -rwxrwxrwx. 1 root root 198593456 Oct 22 05:35 HITS.pool.root.1
2025-10-21 22:35:57 (4508): Guest Log: -rwxrwxrwx. 1 root root      9204 Oct 21 20:39 init_data.xml
2025-10-21 22:35:57 (4508): Guest Log: -rwxrwxrwx. 1 root root    569678 Oct 21 20:38 input.tar.gz
2025-10-21 22:35:57 (4508): Guest Log: -rwxrwxrwx. 1 root root   4751360 Oct 22 05:35 result.tar.gz
2025-10-21 22:35:57 (4508): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 21 20:38 start_atlas.sh
2025-10-21 22:35:57 (4508): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-21 22:35:57 (4508): VM Completion File Detected.
2025-10-21 22:35:57 (4508): Powering off VM.
2025-10-21 22:35:58 (4508): Successfully stopped VM.
2025-10-21 22:35:58 (4508): Deregistering VM. (boinc_ecf19aa63f23cb67, slot#6)
2025-10-21 22:35:59 (4508): Removing network bandwidth throttle group from VM.
2025-10-21 22:35:59 (4508): Removing VM from VirtualBox.
2025-10-21 22:36:04 (4508): called boinc_finish(0)

</stderr_txt>
]]>

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