Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:35:37 (4119903): wrapper (7.7.26015): starting
12:35:37 (4119903): wrapper: running run_atlas (--nthreads 2)
[2025-10-22 12:35:37] Arguments: --nthreads 2
[2025-10-22 12:35:37] Threads: 2
[2025-10-22 12:35:37] Checking for CVMFS
[2025-10-22 12:35:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 12:35:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 12:35:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 12:35:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 12:35:38] 2.9.2.0 3644734 2213 58740 151992 1 57 26682658 36864001 0 130560 0 1225236 99.986 79978 887 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-22 12:35:38] CVMFS is ok
[2025-10-22 12:35:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 12:35:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 12:35:38] Further information can be found at the LHC@home message board.
[2025-10-22 12:35:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 12:35:38] Checking for apptainer binary...
[2025-10-22 12:35:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 12:35:38] Running /usr/bin/apptainer --version
[2025-10-22 12:35:38] apptainer version 1.4.1-1.1
[2025-10-22 12:35:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 12:35:38] thA354
[2025-10-22 12:35:38] apptainer works
[2025-10-22 12:35:38] Set ATHENA_PROC_NUMBER=2
[2025-10-22 12:35:38] Set ATHENA_CORE_NUMBER=2
[2025-10-22 12:35:38] Starting ATLAS job with PandaID=6853116075
[2025-10-22 12:35:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 15:04:12]  *** The last 200 lines of the pilot log: ***
[2025-10-22 15:04:12] 2025-10-22 13:03:38,584 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-22 15:04:12] 2025-10-22 13:03:38,585 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4264.384625000001
[2025-10-22 15:04:12] 2025-10-22 13:03:38,586 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6853116075/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 15:04:12] 2025-10-22 13:03:38,586 | INFO     | extracted standard info from prmon json
[2025-10-22 15:04:12] 2025-10-22 13:03:38,586 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 15:04:12] 2025-10-22 13:03:38,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 15:04:12] 2025-10-22 13:03:38,586 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 15:04:12] 2025-10-22 13:03:38,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 15:04:12] 2025-10-22 13:03:38,587 | INFO     | fitting pss+swap vs Time
[2025-10-22 15:04:12] 2025-10-22 13:03:38,587 | INFO     | sum of square deviations: 945282840.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | sum of deviations: -17903818542.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | mean x: 1761133774.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | mean y: 2357507.9655172415
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | -- intersect: 33358532171.924973
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | intersect: 33358532171.924973
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | chi2: 1.761557133529063
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | sum of square deviations: 850825255.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | sum of deviations: -16872745729.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | mean x: 1761133621.5
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | mean y: 2359173.185714286
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | -- intersect: 34927462319.49797
[2025-10-22 15:04:12] 2025-10-22 13:03:38,588 | INFO     | intersect: 34927462319.49797
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | chi2: 1.7570236128391774
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | current chi2=1.7570236128391774 (change=0.2573587085877368 %)
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | right removable region: 139
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | sum of square deviations: 850825255.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | sum of deviations: -34992697732.5
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | mean x: 1761133926.5
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | mean y: 2384477.464285714
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | -- intersect: 72434210865.20517
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | intersect: 72434210865.20517
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | chi2: 0.30573674801313955
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | current chi2=0.30573674801313955 (change=82.64394936764647 %)
[2025-10-22 15:04:12] 2025-10-22 13:03:38,589 | INFO     | sum of square deviations: 762879420.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | sum of deviations: -28644767289.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | mean x: 1761134079.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | mean y: 2373457.7851851853
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | -- intersect: 66129830215.86937
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | intersect: 66129830215.86937
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | chi2: 0.2915230643444899
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | current chi2=0.2915230643444899 (change=4.6489941955027305 %)
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | left removable region: 20
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | sum of square deviations: 522502820.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | sum of deviations: -14429481375.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | mean x: 1761134201.0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | mean y: 2349294.168067227
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | -- intersect: 48637978001.789215
[2025-10-22 15:04:12] 2025-10-22 13:03:38,590 | INFO     | intersect: 48637978001.789215
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | chi2: 0.21903093306232171
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | -- intersect: 48637978001.789215
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | current memory leak: -27.62 B/s (using 119 data points, chi2=0.22)
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | could have reported an average CPU frequency of 4368 MHz (8 samples)
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | ..............................
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | . Timing measurements:
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | . get job = 0 s
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | . initial setup = 1 s
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | . payload setup = 8 s
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | . stage-in = 0 s
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | . payload execution = 8822 s
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | . stage-out = 0 s
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | . log creation = 0 s
[2025-10-22 15:04:12] 2025-10-22 13:03:38,591 | INFO     | ..............................
[2025-10-22 15:04:12] 2025-10-22 13:03:38,622 | INFO     | 
[2025-10-22 15:04:12] 2025-10-22 13:03:38,622 | INFO     | job summary report
[2025-10-22 15:04:12] 2025-10-22 13:03:38,622 | INFO     | --------------------------------------------------
[2025-10-22 15:04:12] 2025-10-22 13:03:38,622 | INFO     | PanDA job id: 6853116075
[2025-10-22 15:04:12] 2025-10-22 13:03:38,622 | INFO     | task id: 46771637
[2025-10-22 15:04:12] 2025-10-22 13:03:38,622 | INFO     | errors: (none)
[2025-10-22 15:04:12] 2025-10-22 13:03:38,622 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 15:04:12] 2025-10-22 13:03:38,622 | INFO     | pilot state: finished 
[2025-10-22 15:04:12] 2025-10-22 13:03:38,622 | INFO     | transexitcode: 0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,622 | INFO     | exeerrorcode: 0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | exeerrordiag: 
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | exitcode: 0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | exitmsg: OK
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | cpuconsumptiontime: 17233 s
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | nevents: 400
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | neventsw: 0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | pid: 4130021
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | pgrp: 4130021
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | corecount: 2
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | event service: False
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | sizes: {0: 2348934, 7: 2349196, 11: 2349224, 8834: 2386574, 8836: 2386574, 8847: 2386768}
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | --------------------------------------------------
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | 
[2025-10-22 15:04:12] 2025-10-22 13:03:38,623 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-22 15:04:12] 2025-10-22 13:03:38,634 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,634 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,634 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,634 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | job 6853116075 has completed (purged errors)
[2025-10-22 15:04:12] 2025-10-22 13:03:38,635 | INFO     | overall cleanup function is called
[2025-10-22 15:04:12] 2025-10-22 13:03:38,654 | INFO     | PID=4123610 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 15:04:12] 2025-10-22 13:03:39,641 | INFO     | --- collectZombieJob: --- 10, [4130021]
[2025-10-22 15:04:12] 2025-10-22 13:03:39,642 | INFO     | zombie collector waiting for pid 4130021
[2025-10-22 15:04:12] 2025-10-22 13:03:39,642 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 15:04:12] 2025-10-22 13:03:39,642 | INFO     | collected zombie processes
[2025-10-22 15:04:12] 2025-10-22 13:03:39,642 | INFO     | will attempt to kill all subprocesses of pid=4130021
[2025-10-22 15:04:12] 2025-10-22 13:03:39,679 | INFO     | process IDs to be killed: [4130021] (in reverse order)
[2025-10-22 15:04:12] 2025-10-22 13:03:39,700 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 15:04:12] 2025-10-22 13:03:39,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 15:04:12] 2025-10-22 13:03:39,701 | INFO     | did not find any defunct processes belonging to 4130021
[2025-10-22 15:04:12] 2025-10-22 13:03:39,702 | INFO     | did not find any defunct processes belonging to 4130021
[2025-10-22 15:04:12] 2025-10-22 13:03:39,702 | INFO     | ready for new job
[2025-10-22 15:04:12] 2025-10-22 13:03:39,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 15:04:12] 2025-10-22 13:03:39,703 | INFO     | ***************************************
[2025-10-22 15:04:12] 2025-10-22 13:03:39,703 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 15:04:12] 2025-10-22 13:03:39,703 | INFO     | ***************************************
[2025-10-22 15:04:12] 2025-10-22 13:03:39,703 | INFO     | 
[2025-10-22 15:04:12] 2025-10-22 13:03:39,703 | INFO     | architecture information:
[2025-10-22 15:04:12] 2025-10-22 13:03:39,703 | INFO     | executing command: cat /etc/os-release
[2025-10-22 15:04:12] 2025-10-22 13:03:39,711 | INFO     | cat /etc/os-release:
[2025-10-22 15:04:12] NAME="CentOS Linux"
[2025-10-22 15:04:12] VERSION="7 (Core)"
[2025-10-22 15:04:12] ID="centos"
[2025-10-22 15:04:12] ID_LIKE="rhel fedora"
[2025-10-22 15:04:12] VERSION_ID="7"
[2025-10-22 15:04:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 15:04:12] ANSI_COLOR="0;31"
[2025-10-22 15:04:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 15:04:12] HOME_URL="https://www.centos.org/"
[2025-10-22 15:04:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 15:04:12] 
[2025-10-22 15:04:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 15:04:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 15:04:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 15:04:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 15:04:12] 
[2025-10-22 15:04:12] 2025-10-22 13:03:39,711 | INFO     | ***************************************
[2025-10-22 15:04:12] 2025-10-22 13:03:40,214 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-22 15:04:12] 2025-10-22 13:03:40,244 | INFO     | sufficient remaining disk space (496843620352 B)
[2025-10-22 15:04:12] 2025-10-22 13:03:40,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 15:04:12] 2025-10-22 13:03:40,245 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 15:04:12] 2025-10-22 13:03:40,245 | INFO     | update_server=False
[2025-10-22 15:04:12] 2025-10-22 13:03:40,245 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 15:04:12] 2025-10-22 13:03:40,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 15:04:12] 2025-10-22 13:03:40,356 | INFO     | all job control threads have been joined
[2025-10-22 15:04:12] 2025-10-22 13:03:40,666 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-22 15:04:12] 2025-10-22 13:03:40,666 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-22 15:04:12] 2025-10-22 13:03:40,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 15:04:12] 2025-10-22 13:03:40,667 | INFO     | will abort loop
[2025-10-22 15:04:12] 2025-10-22 13:03:40,756 | INFO     | all data control threads have been joined
[2025-10-22 15:04:12] 2025-10-22 13:03:41,167 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 15:04:12] 2025-10-22 13:03:41,251 | INFO     | [job] retrieve thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:41,251 | INFO     | [job] queue monitor thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:41,344 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:41,362 | INFO     | [job] control thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:41,585 | INFO     | all payload control threads have been joined
[2025-10-22 15:04:12] 2025-10-22 13:03:41,672 | INFO     | [job] job monitor thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:41,762 | INFO     | [data] control thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:42,163 | INFO     | [data] copytool_in thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:42,385 | INFO     | [payload] validate_post thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:42,443 | INFO     | [job] validate thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:42,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 15:04:12] 2025-10-22 13:03:42,591 | INFO     | [payload] control thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:42,609 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:42,691 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:42,791 | INFO     | [payload] failed_post thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:43,173 | INFO     | [data] copytool_out thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:46,485 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:03:51,242 | INFO     | job.realtimelogging is not enabled
[2025-10-22 15:04:12] 2025-10-22 13:03:52,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 15:04:12] 2025-10-22 13:04:06,252 | INFO     | [monitor] cgroup control has ended
[2025-10-22 15:04:12] 2025-10-22 13:04:07,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608708224832)>', '<ExcThread(monitor, started 140607632701184)>']
[2025-10-22 15:04:12] 2025-10-22 13:04:10,727 | INFO     | PID=4123610 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 15:04:12] 2025-10-22 13:04:10,727 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 15:04:12] 2025-10-22 13:04:10,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 15:04:12] 2025-10-22 13:04:10,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 15:04:12] 2025-10-22 13:04:10,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 15:04:12] 2025-10-22 13:04:10,728 | INFO     | [monitor] control thread has ended
[2025-10-22 15:04:12] 2025-10-22 13:04:12,483 | INFO     | all workflow threads have been joined
[2025-10-22 15:04:12] 2025-10-22 13:04:12,484 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 15:04:12] 2025-10-22 13:04:12,484 | INFO     | traces error code: 0
[2025-10-22 15:04:12] 2025-10-22 13:04:12,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 15:04:12] 2025-10-22 13:04:12,528 [wrapper] ==== pilot stdout END ====
[2025-10-22 15:04:12] 2025-10-22 13:04:12,531 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 15:04:12] 2025-10-22 13:04:12,533 [wrapper] pilotpid: 4123610
[2025-10-22 15:04:12] 2025-10-22 13:04:12,535 [wrapper] Pilot exit status: 0
[2025-10-22 15:04:12] 2025-10-22 13:04:12,541 [wrapper] pandaids: 6853116075
[2025-10-22 15:04:12] 2025-10-22 13:04:12,554 [wrapper] cleanup supervisor_pilot 4146926 4123611
[2025-10-22 15:04:12] 2025-10-22 13:04:12,556 [wrapper] Test setup, not cleaning
[2025-10-22 15:04:12] 2025-10-22 13:04:12,558 [wrapper] apfmon messages muted
[2025-10-22 15:04:12] 2025-10-22 13:04:12,560 [wrapper] ==== wrapper stdout END ====
[2025-10-22 15:04:12] 2025-10-22 13:04:12,562 [wrapper] ==== wrapper stderr END ====
[2025-10-22 15:04:12]  *** Error codes and diagnostics ***
[2025-10-22 15:04:12]     "exeErrorCode": 0,
[2025-10-22 15:04:12]     "exeErrorDiag": "",
[2025-10-22 15:04:12]     "pilotErrorCode": 0,
[2025-10-22 15:04:12]     "pilotErrorDiag": "",
[2025-10-22 15:04:12]  *** Listing of results directory ***
[2025-10-22 15:04:12] total 446812
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc    557409 Oct 21 18:27 pilot3.tar.gz
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc      5112 Oct 21 19:23 queuedata.json
[2025-10-22 15:04:12] -rwx------ 1 boinc boinc     36292 Oct 21 19:25 runpilot2-wrapper.sh
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc       100 Oct 22 12:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 15:04:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 12:35 run_atlas
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc       105 Oct 22 12:35 job.xml
[2025-10-22 15:04:12] -rw-r--r-- 2 boinc boinc 230923476 Oct 22 12:35 EVNT.46771634._002852.pool.root.1
[2025-10-22 15:04:12] -rw-r--r-- 2 boinc boinc    569677 Oct 22 12:35 input.tar.gz
[2025-10-22 15:04:12] -rw-r--r-- 2 boinc boinc     15120 Oct 22 12:35 start_atlas.sh
[2025-10-22 15:04:12] drwxrwx--x 2 boinc boinc      4096 Oct 22 12:35 shared
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc         0 Oct 22 12:35 boinc_setup_complete
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc      6205 Oct 22 12:35 init_data.xml
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc         0 Oct 22 12:35 boinc_lockfile
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc      2560 Oct 22 12:35 pandaJob.out
[2025-10-22 15:04:12] -rw------- 1 boinc boinc    976986 Oct 22 12:35 agis_schedconf.cvmfs.json
[2025-10-22 15:04:12] -rw------- 1 boinc boinc   1560740 Oct 22 12:35 agis_ddmendpoints.agis.ALL.json
[2025-10-22 15:04:12] drwx------ 5 boinc boinc      4096 Oct 22 12:35 pilot3
[2025-10-22 15:04:12] -rw------- 1 boinc boinc 219573639 Oct 22 15:03 HITS.46771637._071736.pool.root.1
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc       529 Oct 22 15:03 boinc_task_state.xml
[2025-10-22 15:04:12] -rw------- 1 boinc boinc      1018 Oct 22 15:03 memory_monitor_summary.json
[2025-10-22 15:04:12] -rw------- 1 boinc boinc    301094 Oct 22 15:03 log.46771637._071736.job.log.tgz.1
[2025-10-22 15:04:12] -rw------- 1 boinc boinc        95 Oct 22 15:03 pilot_heartbeat.json
[2025-10-22 15:04:12] -rw------- 1 boinc boinc      7759 Oct 22 15:03 heartbeat.json
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc      8192 Oct 22 15:04 boinc_mmap_file
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc        27 Oct 22 15:04 wrapper_checkpoint.txt
[2025-10-22 15:04:12] -rw------- 1 boinc boinc      5010 Oct 22 15:04 pilotlog.txt
[2025-10-22 15:04:12] -rw------- 1 boinc boinc   1265604 Oct 22 15:04 log.46771637._071736.job.log.1
[2025-10-22 15:04:12] -rw------- 1 boinc boinc       357 Oct 22 15:04 output.list
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc       620 Oct 22 15:04 runtime_log
[2025-10-22 15:04:12] -rw------- 1 boinc boinc   1587200 Oct 22 15:04 result.tar.gz
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc      8777 Oct 22 15:04 runtime_log.err
[2025-10-22 15:04:12] -rw------- 1 boinc boinc       660 Oct 22 15:04 8yPKDmxHVV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmt0fMDmPV1Eim.diag
[2025-10-22 15:04:12] -rw-r--r-- 1 boinc boinc     21136 Oct 22 15:04 stderr.txt
[2025-10-22 15:04:12] HITS file was successfully produced:
[2025-10-22 15:04:12] -rw------- 1 boinc boinc 219573639 Oct 22 15:03 shared/HITS.pool.root.1
[2025-10-22 15:04:12]  *** Contents of shared directory: ***
[2025-10-22 15:04:12] total 442076
[2025-10-22 15:04:12] -rw-r--r-- 2 boinc boinc 230923476 Oct 22 12:35 ATLAS.root_0
[2025-10-22 15:04:12] -rw-r--r-- 2 boinc boinc    569677 Oct 22 12:35 input.tar.gz
[2025-10-22 15:04:12] -rw-r--r-- 2 boinc boinc     15120 Oct 22 12:35 start_atlas.sh
[2025-10-22 15:04:12] -rw------- 1 boinc boinc 219573639 Oct 22 15:03 HITS.pool.root.1
[2025-10-22 15:04:12] -rw------- 1 boinc boinc   1587200 Oct 22 15:04 result.tar.gz
15:04:13 (4119903): run_atlas exited; CPU time 17276.229788
15:04:13 (4119903): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN