Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:53:12 (23523): wrapper (7.7.26015): starting
07:53:12 (23523): wrapper: running run_atlas (--nthreads 8)
[2025-10-22 07:53:12] Arguments: --nthreads 8
[2025-10-22 07:53:12] Threads: 8
[2025-10-22 07:53:12] Checking for CVMFS
[2025-10-22 07:53:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 07:53:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 07:53:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 07:53:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 07:53:15] 2.11.2.0 23990 121380 131604 151983 3 60 15212718 25165825 4632 130560 0 39873253 99.909 16905492 2256 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-22 07:53:15] CVMFS is ok
[2025-10-22 07:53:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 07:53:15] Checking for apptainer binary...
[2025-10-22 07:53:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 07:53:15] Running /usr/bin/apptainer --version
[2025-10-22 07:53:15] apptainer version 1.3.2-1.el7
[2025-10-22 07:53:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 07:53:22] cg-vwn247.simple-grid.lan
[2025-10-22 07:53:22] apptainer works
[2025-10-22 07:53:22] Set ATHENA_PROC_NUMBER=8
[2025-10-22 07:53:22] Set ATHENA_CORE_NUMBER=8
[2025-10-22 07:53:22] Starting ATLAS job with PandaID=6853082144
[2025-10-22 07:53:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 12:32:19]  *** The last 200 lines of the pilot log: ***
[2025-10-22 12:32:19] 2025-10-22 10:31:37,335 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 12:32:19] 2025-10-22 10:31:37,341 | INFO     | fitting pss+swap vs Time
[2025-10-22 12:32:19] 2025-10-22 10:31:37,342 | INFO     | sum of square deviations: 5576683165.5
[2025-10-22 12:32:19] 2025-10-22 10:31:37,344 | INFO     | sum of deviations: 88216791906.49998
[2025-10-22 12:32:19] 2025-10-22 10:31:37,345 | INFO     | mean x: 1761121029.5
[2025-10-22 12:32:19] 2025-10-22 10:31:37,345 | INFO     | mean y: 2461447.6145038167
[2025-10-22 12:32:19] 2025-10-22 10:31:37,345 | INFO     | -- intersect: -27856472397.273037
[2025-10-22 12:32:19] 2025-10-22 10:31:37,345 | INFO     | intersect: -27856472397.273037
[2025-10-22 12:32:19] 2025-10-22 10:31:37,345 | INFO     | chi2: 6.030321931409762
[2025-10-22 12:32:19] 2025-10-22 10:31:37,346 | INFO     | sum of square deviations: 5263458688.0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,348 | INFO     | sum of deviations: 103970781134.99998
[2025-10-22 12:32:19] 2025-10-22 10:31:37,349 | INFO     | mean x: 1761120877.0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,349 | INFO     | mean y: 2468987.579766537
[2025-10-22 12:32:19] 2025-10-22 10:31:37,349 | INFO     | -- intersect: -34785514372.54464
[2025-10-22 12:32:19] 2025-10-22 10:31:37,349 | INFO     | intersect: -34785514372.54464
[2025-10-22 12:32:19] 2025-10-22 10:31:37,349 | INFO     | chi2: 5.298628673758404
[2025-10-22 12:32:19] 2025-10-22 10:31:37,350 | INFO     | current chi2=5.298628673758404 (change=12.133568754268872 %)
[2025-10-22 12:32:19] 2025-10-22 10:31:37,350 | INFO     | right removable region: 256
[2025-10-22 12:32:19] 2025-10-22 10:31:37,350 | INFO     | sum of square deviations: 5263458688.0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,352 | INFO     | sum of deviations: -1421422426.9999943
[2025-10-22 12:32:19] 2025-10-22 10:31:37,353 | INFO     | mean x: 1761121182.0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,353 | INFO     | mean y: 2505047.4163424126
[2025-10-22 12:32:19] 2025-10-22 10:31:37,353 | INFO     | -- intersect: 478104324.079562
[2025-10-22 12:32:19] 2025-10-22 10:31:37,353 | INFO     | intersect: 478104324.079562
[2025-10-22 12:32:19] 2025-10-22 10:31:37,353 | INFO     | chi2: 1.5221631213711657
[2025-10-22 12:32:19] 2025-10-22 10:31:37,354 | INFO     | current chi2=1.5221631213711657 (change=74.75817810915252 %)
[2025-10-22 12:32:19] 2025-10-22 10:31:37,354 | INFO     | sum of square deviations: 4962187923.0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,356 | INFO     | sum of deviations: -31739242206.0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,356 | INFO     | mean x: 1761121334.5
[2025-10-22 12:32:19] 2025-10-22 10:31:37,357 | INFO     | mean y: 2520292.277777778
[2025-10-22 12:32:19] 2025-10-22 10:31:37,357 | INFO     | -- intersect: 11267038576.79609
[2025-10-22 12:32:19] 2025-10-22 10:31:37,357 | INFO     | intersect: 11267038576.79609
[2025-10-22 12:32:19] 2025-10-22 10:31:37,357 | INFO     | chi2: 0.8268548852724782
[2025-10-22 12:32:19] 2025-10-22 10:31:37,357 | INFO     | current chi2=0.8268548852724782 (change=45.678956896048916 %)
[2025-10-22 12:32:19] 2025-10-22 10:31:37,358 | INFO     | sum of square deviations: 4672638308.0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,360 | INFO     | sum of deviations: -35662875483.00001
[2025-10-22 12:32:19] 2025-10-22 10:31:37,360 | INFO     | mean x: 1761121487.0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,360 | INFO     | mean y: 2522337.6680161944
[2025-10-22 12:32:19] 2025-10-22 10:31:37,361 | INFO     | -- intersect: 13443891466.065107
[2025-10-22 12:32:19] 2025-10-22 10:31:37,361 | INFO     | intersect: 13443891466.065107
[2025-10-22 12:32:19] 2025-10-22 10:31:37,361 | INFO     | chi2: 0.8020221938841959
[2025-10-22 12:32:19] 2025-10-22 10:31:37,361 | INFO     | current chi2=0.8020221938841959 (change=3.003270807319352 %)
[2025-10-22 12:32:19] 2025-10-22 10:31:37,361 | INFO     | left removable region: 30
[2025-10-22 12:32:19] 2025-10-22 10:31:37,362 | INFO     | sum of square deviations: 3579276412.5
[2025-10-22 12:32:19] 2025-10-22 10:31:37,364 | INFO     | sum of deviations: -18190974669.5
[2025-10-22 12:32:19] 2025-10-22 10:31:37,364 | INFO     | mean x: 1761121761.5
[2025-10-22 12:32:19] 2025-10-22 10:31:37,364 | INFO     | mean y: 2531539.6858407077
[2025-10-22 12:32:19] 2025-10-22 10:31:37,364 | INFO     | -- intersect: 8953089602.614355
[2025-10-22 12:32:19] 2025-10-22 10:31:37,364 | INFO     | intersect: 8953089602.614355
[2025-10-22 12:32:19] 2025-10-22 10:31:37,365 | INFO     | chi2: 0.011674023421152658
[2025-10-22 12:32:19] 2025-10-22 10:31:37,365 | INFO     | -- intersect: 8953089602.614355
[2025-10-22 12:32:19] 2025-10-22 10:31:37,365 | INFO     | current memory leak: -5.08 B/s (using 226 data points, chi2=0.01)
[2025-10-22 12:32:19] 2025-10-22 10:31:37,366 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-22 12:32:19] 2025-10-22 10:31:37,366 | INFO     | ..............................
[2025-10-22 12:32:19] 2025-10-22 10:31:37,366 | INFO     | . Timing measurements:
[2025-10-22 12:32:19] 2025-10-22 10:31:37,366 | INFO     | . get job = 0 s
[2025-10-22 12:32:19] 2025-10-22 10:31:37,367 | INFO     | . initial setup = 9 s
[2025-10-22 12:32:19] 2025-10-22 10:31:37,367 | INFO     | . payload setup = 124 s
[2025-10-22 12:32:19] 2025-10-22 10:31:37,367 | INFO     | . stage-in = 0 s
[2025-10-22 12:32:19] 2025-10-22 10:31:37,367 | INFO     | . payload execution = 16087 s
[2025-10-22 12:32:19] 2025-10-22 10:31:37,367 | INFO     | . stage-out = 3 s
[2025-10-22 12:32:19] 2025-10-22 10:31:37,367 | INFO     | . log creation = 1 s
[2025-10-22 12:32:19] 2025-10-22 10:31:37,367 | INFO     | ..............................
[2025-10-22 12:32:19] 2025-10-22 10:31:37,490 | INFO     | 
[2025-10-22 12:32:19] 2025-10-22 10:31:37,490 | INFO     | job summary report
[2025-10-22 12:32:19] 2025-10-22 10:31:37,490 | INFO     | --------------------------------------------------
[2025-10-22 12:32:19] 2025-10-22 10:31:37,490 | INFO     | PanDA job id: 6853082144
[2025-10-22 12:32:19] 2025-10-22 10:31:37,490 | INFO     | task id: 46771637
[2025-10-22 12:32:19] 2025-10-22 10:31:37,490 | INFO     | errors: (none)
[2025-10-22 12:32:19] 2025-10-22 10:31:37,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 12:32:19] 2025-10-22 10:31:37,490 | INFO     | pilot state: finished 
[2025-10-22 12:32:19] 2025-10-22 10:31:37,491 | INFO     | transexitcode: 0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,491 | INFO     | exeerrorcode: 0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,491 | INFO     | exeerrordiag: 
[2025-10-22 12:32:19] 2025-10-22 10:31:37,491 | INFO     | exitcode: 0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,491 | INFO     | exitmsg: OK
[2025-10-22 12:32:19] 2025-10-22 10:31:37,491 | INFO     | cpuconsumptiontime: 60619 s
[2025-10-22 12:32:19] 2025-10-22 10:31:37,491 | INFO     | nevents: 400
[2025-10-22 12:32:19] 2025-10-22 10:31:37,491 | INFO     | neventsw: 0
[2025-10-22 12:32:19] 2025-10-22 10:31:37,491 | INFO     | pid: 1473
[2025-10-22 12:32:19] 2025-10-22 10:31:37,491 | INFO     | pgrp: 1473
[2025-10-22 12:32:19] 2025-10-22 10:31:37,492 | INFO     | corecount: 8
[2025-10-22 12:32:19] 2025-10-22 10:31:37,492 | INFO     | event service: False
[2025-10-22 12:32:19] 2025-10-22 10:31:37,492 | INFO     | sizes: {0: 2348052, 1: 2348909, 2: 2348937, 12: 2348937, 23: 2348965, 34: 2348993, 45: 2349149, 55: 2349177, 66: 2349205, 77: 2349233, 87: 2349289, 93: 2349859, 98
[2025-10-22 12:32:19] 2025-10-22 10:31:37,492 | INFO     | --------------------------------------------------
[2025-10-22 12:32:19] 2025-10-22 10:31:37,492 | INFO     | 
[2025-10-22 12:32:19] 2025-10-22 10:31:37,492 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-10-22 12:32:19] 2025-10-22 10:31:37,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 12:32:19] 2025-10-22 10:31:37,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 12:32:19] 2025-10-22 10:31:37,535 | INFO     | job 6853082144 has completed (purged errors)
[2025-10-22 12:32:19] 2025-10-22 10:31:37,535 | INFO     | overall cleanup function is called
[2025-10-22 12:32:19] 2025-10-22 10:31:38,545 | INFO     | --- collectZombieJob: --- 10, [1473]
[2025-10-22 12:32:19] 2025-10-22 10:31:38,545 | INFO     | zombie collector waiting for pid 1473
[2025-10-22 12:32:19] 2025-10-22 10:31:38,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 12:32:19] 2025-10-22 10:31:38,545 | INFO     | collected zombie processes
[2025-10-22 12:32:19] 2025-10-22 10:31:38,545 | INFO     | will attempt to kill all subprocesses of pid=1473
[2025-10-22 12:32:19] 2025-10-22 10:31:38,654 | INFO     | process IDs to be killed: [1473] (in reverse order)
[2025-10-22 12:32:19] 2025-10-22 10:31:39,413 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 12:32:19] 2025-10-22 10:31:39,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 12:32:19] 2025-10-22 10:31:39,417 | INFO     | did not find any defunct processes belonging to 1473
[2025-10-22 12:32:19] 2025-10-22 10:31:39,420 | INFO     | did not find any defunct processes belonging to 1473
[2025-10-22 12:32:19] 2025-10-22 10:31:39,420 | INFO     | ready for new job
[2025-10-22 12:32:19] 2025-10-22 10:31:39,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 12:32:19] 2025-10-22 10:31:39,423 | INFO     | ***************************************
[2025-10-22 12:32:19] 2025-10-22 10:31:39,423 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 12:32:19] 2025-10-22 10:31:39,423 | INFO     | ***************************************
[2025-10-22 12:32:19] 2025-10-22 10:31:39,423 | INFO     | 
[2025-10-22 12:32:19] 2025-10-22 10:31:39,424 | INFO     | pilot is running in a VM
[2025-10-22 12:32:19] 2025-10-22 10:31:39,424 | INFO     | architecture information:
[2025-10-22 12:32:19] 2025-10-22 10:31:39,425 | INFO     | executing command: cat /etc/os-release
[2025-10-22 12:32:19] 2025-10-22 10:31:39,635 | INFO     | cat /etc/os-release:
[2025-10-22 12:32:19] NAME="CentOS Linux"
[2025-10-22 12:32:19] VERSION="7 (Core)"
[2025-10-22 12:32:19] ID="centos"
[2025-10-22 12:32:19] ID_LIKE="rhel fedora"
[2025-10-22 12:32:19] VERSION_ID="7"
[2025-10-22 12:32:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 12:32:19] ANSI_COLOR="0;31"
[2025-10-22 12:32:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 12:32:19] HOME_URL="https://www.centos.org/"
[2025-10-22 12:32:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 12:32:19] 
[2025-10-22 12:32:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 12:32:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 12:32:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 12:32:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 12:32:19] 
[2025-10-22 12:32:19] 2025-10-22 10:31:39,636 | INFO     | ***************************************
[2025-10-22 12:32:19] 2025-10-22 10:31:40,143 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-10-22 12:32:19] 2025-10-22 10:31:40,179 | INFO     | sufficient remaining disk space (495549677568 B)
[2025-10-22 12:32:19] 2025-10-22 10:31:40,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 12:32:19] 2025-10-22 10:31:40,180 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 12:32:19] 2025-10-22 10:31:40,180 | INFO     | update_server=False
[2025-10-22 12:32:19] 2025-10-22 10:31:40,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 12:32:19] 2025-10-22 10:31:40,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 12:32:19] 2025-10-22 10:31:40,181 | INFO     | aborting loop
[2025-10-22 12:32:19] 2025-10-22 10:31:40,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 12:32:19] 2025-10-22 10:31:40,660 | INFO     | all payload control threads have been joined
[2025-10-22 12:32:19] 2025-10-22 10:31:40,685 | INFO     | all data control threads have been joined
[2025-10-22 12:32:19] 2025-10-22 10:31:40,907 | INFO     | all job control threads have been joined
[2025-10-22 12:32:19] 2025-10-22 10:31:41,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 12:32:19] 2025-10-22 10:31:41,187 | INFO     | [job] job monitor thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:41,188 | INFO     | [job] retrieve thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:41,204 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:41,230 | INFO     | [data] copytool_in thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:41,530 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:41,666 | INFO     | [payload] control thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:41,691 | INFO     | [data] control thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:41,760 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:41,913 | INFO     | [job] control thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:42,139 | INFO     | [payload] failed_post thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:42,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:42,334 | INFO     | [payload] validate_post thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:42,414 | INFO     | [data] copytool_out thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:42,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 12:32:19] 2025-10-22 10:31:42,649 | INFO     | [job] validate thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:43,516 | INFO     | [job] queue monitor thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:31:45,039 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 12:32:19] 2025-10-22 10:32:07,927 | INFO     | 16506s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-22 12:32:19] 2025-10-22 10:32:08,929 | INFO     | [monitor] cgroup control has ended
[2025-10-22 12:32:19] 2025-10-22 10:32:09,077 | INFO     | PID=27333 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-22 12:32:19] 2025-10-22 10:32:09,077 | INFO     | .. there are 9 such processes running
[2025-10-22 12:32:19] 2025-10-22 10:32:09,078 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 12:32:19] 2025-10-22 10:32:09,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 12:32:19] 2025-10-22 10:32:09,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 12:32:19] 2025-10-22 10:32:09,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139999428421440)>', '<ExcThread(monitor, started 139998980450048)>']
[2025-10-22 12:32:19] 2025-10-22 10:32:10,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 12:32:19] 2025-10-22 10:32:10,085 | INFO     | [monitor] control thread has ended
[2025-10-22 12:32:19] 2025-10-22 10:32:14,543 | INFO     | all workflow threads have been joined
[2025-10-22 12:32:19] 2025-10-22 10:32:14,543 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 12:32:19] 2025-10-22 10:32:14,543 | INFO     | traces error code: 0
[2025-10-22 12:32:19] 2025-10-22 10:32:14,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 12:32:19] 2025-10-22 10:32:14,930 [wrapper] ==== pilot stdout END ====
[2025-10-22 12:32:19] 2025-10-22 10:32:15,023 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 12:32:19] 2025-10-22 10:32:15,132 [wrapper] pilotpid: 27333
[2025-10-22 12:32:19] 2025-10-22 10:32:15,193 [wrapper] Pilot exit status: 0
[2025-10-22 12:32:19] 2025-10-22 10:32:15,679 [wrapper] pandaids: 6853082144
[2025-10-22 12:32:19] 2025-10-22 10:32:16,315 [wrapper] cleanup supervisor_pilot 30783 27334
[2025-10-22 12:32:19] 2025-10-22 10:32:16,420 [wrapper] Test setup, not cleaning
[2025-10-22 12:32:19] 2025-10-22 10:32:16,560 [wrapper] apfmon messages muted
[2025-10-22 12:32:19] 2025-10-22 10:32:16,636 [wrapper] ==== wrapper stdout END ====
[2025-10-22 12:32:19] 2025-10-22 10:32:16,697 [wrapper] ==== wrapper stderr END ====
[2025-10-22 12:32:19]  *** Error codes and diagnostics ***
[2025-10-22 12:32:19]     "exeErrorCode": 0,
[2025-10-22 12:32:19]     "exeErrorDiag": "",
[2025-10-22 12:32:19]     "pilotErrorCode": 0,
[2025-10-22 12:32:19]     "pilotErrorDiag": "",
[2025-10-22 12:32:19]  *** Listing of results directory ***
[2025-10-22 12:32:19] total 427676
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc    557409 Oct 21 15:27 pilot3.tar.gz
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc      5112 Oct 21 16:19 queuedata.json
[2025-10-22 12:32:19] -rwx------. 1 boinc boinc     36292 Oct 21 16:20 runpilot2-wrapper.sh
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc       100 Oct 22 07:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 12:32:19] -rwxr-xr-x. 1 boinc boinc      7986 Oct 22 07:53 run_atlas
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc       105 Oct 22 07:53 job.xml
[2025-10-22 12:32:19] -rw-r--r--. 2 boinc boinc 226780530 Oct 22 07:53 EVNT.46771634._002743.pool.root.1
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc      6393 Oct 22 07:53 init_data.xml
[2025-10-22 12:32:19] -rw-r--r--. 2 boinc boinc     15120 Oct 22 07:53 start_atlas.sh
[2025-10-22 12:32:19] drwxrwx--x. 2 boinc boinc        68 Oct 22 07:53 shared
[2025-10-22 12:32:19] -rw-r--r--. 2 boinc boinc    569678 Oct 22 07:53 input.tar.gz
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc         0 Oct 22 07:53 boinc_lockfile
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc      2559 Oct 22 07:53 pandaJob.out
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc    978464 Oct 22 07:56 agis_schedconf.cvmfs.json
[2025-10-22 12:32:19] drwx------. 5 boinc boinc      4096 Oct 22 07:56 pilot3
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc 201917040 Oct 22 12:28 HITS.46771637._069045.pool.root.1
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc       531 Oct 22 12:28 boinc_task_state.xml
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc      1017 Oct 22 12:29 memory_monitor_summary.json
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc   1560740 Oct 22 12:29 agis_ddmendpoints.agis.ALL.json
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc    476237 Oct 22 12:29 log.46771637._069045.job.log.tgz.1
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc      7781 Oct 22 12:31 heartbeat.json
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc      8192 Oct 22 12:31 boinc_mmap_file
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc        28 Oct 22 12:31 wrapper_checkpoint.txt
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc        95 Oct 22 12:32 pilot_heartbeat.json
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc      5001 Oct 22 12:32 pilotlog.txt
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc   2197726 Oct 22 12:32 log.46771637._069045.job.log.1
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc       357 Oct 22 12:32 output.list
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc       620 Oct 22 12:32 runtime_log
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc   2693120 Oct 22 12:32 result.tar.gz
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc      8717 Oct 22 12:32 runtime_log.err
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc       657 Oct 22 12:32 4NpMDmtOSV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLifMDmaZAbLm.diag
[2025-10-22 12:32:19] -rw-r--r--. 1 boinc boinc     20642 Oct 22 12:32 stderr.txt
[2025-10-22 12:32:19] HITS file was successfully produced:
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc 201917040 Oct 22 12:28 shared/HITS.pool.root.1
[2025-10-22 12:32:19]  *** Contents of shared directory: ***
[2025-10-22 12:32:19] total 421864
[2025-10-22 12:32:19] -rw-r--r--. 2 boinc boinc 226780530 Oct 22 07:53 ATLAS.root_0
[2025-10-22 12:32:19] -rw-r--r--. 2 boinc boinc     15120 Oct 22 07:53 start_atlas.sh
[2025-10-22 12:32:19] -rw-r--r--. 2 boinc boinc    569678 Oct 22 07:53 input.tar.gz
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc 201917040 Oct 22 12:28 HITS.pool.root.1
[2025-10-22 12:32:19] -rw-------. 1 boinc boinc   2693120 Oct 22 12:32 result.tar.gz
12:32:21 (23523): run_atlas exited; CPU time 60841.387453
12:32:21 (23523): called boinc_finish(0)

</stderr_txt>
]]>

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