Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-21 20:31:20 (41346): vboxwrapper version 26210
2025-10-21 20:31:20 (41346): BOINC client version: 7.24.1
2025-10-21 20:31:20 (41346): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-10-21 20:31:20 (41346): Successfully copied 'init_data.xml' to the shared directory.
2025-10-21 20:31:20 (41346): Create VM. (boinc_7558f2e670bf23df, slot#0)
2025-10-21 20:31:21 (41346): Setting Memory Size for VM. (4300MB)
2025-10-21 20:31:21 (41346): Setting CPU Count for VM. (3)
2025-10-21 20:31:21 (41346): Setting Chipset Options for VM.
2025-10-21 20:31:21 (41346): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-21 20:31:21 (41346): Setting Boot Options for VM.
2025-10-21 20:31:21 (41346): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-21 20:31:21 (41346): Enabling VM Network Access.
2025-10-21 20:31:21 (41346): Disabling USB Support for VM.
2025-10-21 20:31:21 (41346): Disabling COM Port Support for VM.
2025-10-21 20:31:21 (41346): Disabling LPT Port Support for VM.
2025-10-21 20:31:21 (41346): Disabling Audio Support for VM.
2025-10-21 20:31:21 (41346): Disabling Clipboard Support for VM.
2025-10-21 20:31:21 (41346): Disabling Drag and Drop Support for VM.
2025-10-21 20:31:21 (41346): Adding storage controller(s) to VM.
2025-10-21 20:31:22 (41346): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-21 20:31:22 (41346): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-21 20:31:22 (41346): forwarding host port 53061 to guest port 80
2025-10-21 20:31:22 (41346): Enabling remote desktop for VM.
2025-10-21 20:31:22 (41346): Required extension pack not installed, remote desktop not enabled.
2025-10-21 20:31:22 (41346): Enabling shared directory for VM.
2025-10-21 20:31:22 (41346): Starting VM using VBoxManage interface. (boinc_7558f2e670bf23df, slot#0)
2025-10-21 20:31:23 (41346): Successfully started VM. (PID = '41825')
2025-10-21 20:31:23 (41346): Reporting VM Process ID to BOINC.
2025-10-21 20:31:23 (41346): Guest Log: BIOS: VirtualBox 7.0.16
2025-10-21 20:31:23 (41346): Guest Log: CPUID EDX: 0x178bfbff
2025-10-21 20:31:23 (41346): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-21 20:31:23 (41346): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-21 20:31:23 (41346): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-21 20:31:23 (41346): Detected: Web Application Enabled (http://localhost:53061)
2025-10-21 20:31:23 (41346): Preference change detected
2025-10-21 20:31:23 (41346): Setting CPU throttle for VM. (80%)
2025-10-21 20:31:24 (41346): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-21 20:31:25 (41346): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-21 20:31:25 (41346): Guest Log: BIOS: Booting from Hard Disk...
2025-10-21 20:31:28 (41346): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-21 20:31:28 (41346): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-21 20:31:28 (41346): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-21 20:31:33 (41346): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-21 20:31:33 (41346): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-21 20:31:41 (41346): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-21 20:31:41 (41346): Guest Log: 00:00:00.000183 main     Log opened 2025-10-22T01:31:39.325536000Z
2025-10-21 20:31:41 (41346): Guest Log: 00:00:00.000336 main     OS Product: Linux
2025-10-21 20:31:41 (41346): Guest Log: 00:00:00.000380 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-21 20:31:41 (41346): Guest Log: 00:00:00.000416 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-21 20:31:41 (41346): Guest Log: 00:00:00.000458 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-21 20:31:41 (41346): Guest Log: 00:00:00.000459 main     Process ID: 1282
2025-10-21 20:31:41 (41346): Guest Log: 00:00:00.000460 main     Package type: LINUX_64BITS_GENERIC
2025-10-21 20:31:41 (41346): Guest Log: 00:00:00.001960 main     5.2.32 r132073 started. Verbose level = 0
2025-10-21 20:31:41 (41346): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-21 20:31:41 (41346): Guest Log: [INFO] Mounting shared directory
2025-10-21 20:31:41 (41346): Guest Log: [INFO] Checking for init_data.xml
2025-10-21 20:33:15 (41346): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-21 20:33:15 (41346): Guest Log: [INFO] Detected branch: prod
2025-10-21 20:33:16 (41346): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-21 20:33:16 (41346): Guest Log: Copying input files
2025-10-21 20:33:17 (41346): Guest Log: Copied input files into RunAtlas.
2025-10-21 20:33:17 (41346): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-21 20:33:17 (41346): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-21 20:33:17 (41346): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-21 20:33:17 (41346): Guest Log: Further information can be found at the LHC@home message board.
2025-10-21 20:34:27 (41346): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-21 20:34:28 (41346): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-21 20:34:28 (41346): Guest Log: 2.6.3.0 1594 2 32316 151977 4 1 3120538 4096000 0 65024 0 0 n/a 1292 187 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-21 20:34:30 (41346): Guest Log: copied the webapp to /var/www
2025-10-21 20:34:30 (41346): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-21 20:34:30 (41346): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-21 20:34:30 (41346): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-21 20:34:30 (41346): Guest Log:  *** Starting ATLAS job. (PandaID=6853059425 taskID=46771637) ***
2025-10-21 21:23:47 (41346): VM state change detected. (old = 'running', new = 'paused')
2025-10-21 21:24:09 (41346): VM state change detected. (old = 'paused', new = 'running')
2025-10-21 21:51:25 (41346): VM state change detected. (old = 'running', new = 'paused')
2025-10-21 21:51:45 (41346): VM state change detected. (old = 'paused', new = 'running')
2025-10-21 22:11:08 (41346): Status Report: Elapsed Time: '6000.000000'
2025-10-21 22:11:08 (41346): Status Report: CPU Time: '11608.380000'
2025-10-21 23:23:49 (41346): VM state change detected. (old = 'running', new = 'paused')
2025-10-21 23:24:10 (41346): VM state change detected. (old = 'paused', new = 'running')
2025-10-21 23:50:31 (41346): Status Report: Elapsed Time: '12000.000000'
2025-10-21 23:50:31 (41346): Status Report: CPU Time: '26163.320000'
2025-10-21 23:50:57 (41346): VM state change detected. (old = 'running', new = 'paused')
2025-10-21 23:51:16 (41346): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 01:23:50 (41346): VM state change detected. (old = 'running', new = 'paused')
2025-10-22 01:24:11 (41346): VM state change detected. (old = 'paused', new = 'running')
2025-10-22 01:30:15 (41346): Status Report: Elapsed Time: '18000.000000'
2025-10-22 01:30:15 (41346): Status Report: CPU Time: '40556.970000'
2025-10-22 01:30:55 (41346): Guest Log:  *** Job finished ***
2025-10-22 01:30:55 (41346): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:00,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:00,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:11,279 | INFO     | [monitor] cgroup control has ended
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:12,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140042179106624)>', '<ExcThread(monitor, started 140041863014144)>']
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:12,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:12,825 | INFO     | [monitor] control thread has ended
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:17,264 | INFO     | all workflow threads have been joined
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:17,265 | INFO     | end of generic workflow (traces error code: 0)
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:17,265 | INFO     | traces error code: 0
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:17,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:17,418 [wrapper] ==== pilot stdout END ====
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:17,438 [wrapper] ==== wrapper stdout RESUME ====
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:17,453 [wrapper] pilotpid: 6129
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:17,473 [wrapper] Pilot exit status: 0
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:19,132 [wrapper] pandaids: 6853059425
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:19,174 [wrapper] cleanup supervisor_pilot 19976 6130
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:19,186 [wrapper] Test setup, not cleaning
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:19,195 [wrapper] apfmon messages muted
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:19,204 [wrapper] ==== wrapper stdout END ====
2025-10-22 01:30:55 (41346): Guest Log: 2025-10-22 06:29:19,215 [wrapper] ==== wrapper stderr END ====
2025-10-22 01:30:55 (41346): Guest Log:  *** Error codes and diagnostics ***
2025-10-22 01:30:55 (41346): Guest Log:     "exeErrorCode": 0,
2025-10-22 01:30:55 (41346): Guest Log:     "exeErrorDiag": "",
2025-10-22 01:30:55 (41346): Guest Log:     "pilotErrorCode": 0,
2025-10-22 01:30:55 (41346): Guest Log:     "pilotErrorDiag": "",
2025-10-22 01:30:55 (41346): Guest Log:  *** Listing of results directory ***
2025-10-22 01:30:55 (41346): Guest Log: total 211048
2025-10-22 01:30:55 (41346): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 21 12:31 pilot3.tar.gz
2025-10-22 01:30:55 (41346): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 21 13:04 queuedata.json
2025-10-22 01:30:55 (41346): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 21 13:06 runpilot2-wrapper.sh
2025-10-22 01:30:55 (41346): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 22 01:33 start_atlas.sh
2025-10-22 01:30:55 (41346): Guest Log: -rw-r--r--. 1 atlas atlas      6450 Oct 22 01:33 init_data.xml
2025-10-22 01:30:55 (41346): Guest Log: -rw-r--r--. 1 atlas atlas    569677 Oct 22 01:33 input.tar.gz
2025-10-22 01:30:55 (41346): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 01:33 EVNT.46771634._002698.pool.root.1 -> /data/./ATLAS.root_0
2025-10-22 01:30:55 (41346): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Oct 22 01:34 pandaJob.out
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas    978432 Oct 22 01:44 agis_schedconf.cvmfs.json
2025-10-22 01:30:55 (41346): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 01:44 pilot3
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas 207224272 Oct 22 06:27 HITS.46771637._068054.pool.root.1
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 22 06:28 memory_monitor_summary.json
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 22 06:28 agis_ddmendpoints.agis.ALL.json
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas    411813 Oct 22 06:28 log.46771637._068054.job.log.tgz.1
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas        95 Oct 22 06:28 pilot_heartbeat.json
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas      7826 Oct 22 06:28 heartbeat.json
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 22 06:29 pilotlog.txt
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas   2113704 Oct 22 06:29 log.46771637._068054.job.log.1
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas       357 Oct 22 06:29 output.list
2025-10-22 01:30:55 (41346): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 22 06:29 runtime_log
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas   2549760 Oct 22 06:29 result.tar.gz
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas       677 Oct 22 06:29 xNZNDmjFRV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMdfMDmTaROGm.diag
2025-10-22 01:30:55 (41346): Guest Log: -rw-r--r--. 1 atlas atlas      8694 Oct 22 06:29 runtime_log.err
2025-10-22 01:30:55 (41346): Guest Log: Looking for outputfile HITS.46771637._068054.pool.root.1
2025-10-22 01:30:55 (41346): Guest Log: HITS file was successfully produced
2025-10-22 01:30:55 (41346): Guest Log: -rw-------. 1 atlas atlas 207224272 Oct 22 06:27 /home/atlas/RunAtlas/HITS.46771637._068054.pool.root.1
2025-10-22 01:30:56 (41346): Guest Log: Successfully finished the ATLAS job!
2025-10-22 01:30:56 (41346): Guest Log: Copying the results back to the shared directory!
2025-10-22 01:30:56 (41346): Guest Log:  *** Contents of shared directory: ***
2025-10-22 01:30:56 (41346): Guest Log: total 226920
2025-10-22 01:30:56 (41346): Guest Log: -rw-r--r--. 1 root root 229209055 Oct 22 01:31 ATLAS.root_0
2025-10-22 01:30:56 (41346): Guest Log: -rw-r--r--. 1 root root      6450 Oct 22 01:31 init_data.xml
2025-10-22 01:30:56 (41346): Guest Log: -rw-r--r--. 1 root root    569677 Oct 22 01:31 input.tar.gz
2025-10-22 01:30:56 (41346): Guest Log: -rw-r--r--. 1 root root   2549760 Oct 22  2025 result.tar.gz
2025-10-22 01:30:56 (41346): Guest Log: -rw-r--r--. 1 root root     15120 Oct 22 01:31 start_atlas.sh
2025-10-22 01:30:56 (41346): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-22 01:30:56 (41346): VM Completion File Detected.
2025-10-22 01:30:56 (41346): Powering off VM.
2025-10-22 01:30:56 (41346): Successfully stopped VM.
2025-10-22 01:30:56 (41346): Deregistering VM. (boinc_7558f2e670bf23df, slot#0)
2025-10-22 01:30:56 (41346): Removing network bandwidth throttle group from VM.
2025-10-22 01:30:56 (41346): Removing VM from VirtualBox.
2025-10-22 01:31:02 (41346): called boinc_finish(0)

</stderr_txt>
]]>

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