Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:15:22 (130482): wrapper (7.7.26015): starting
13:15:22 (130482): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 13:15:22] Arguments: --nthreads 8
[2025-10-21 13:15:22] Threads: 8
[2025-10-21 13:15:22] Checking for CVMFS
[2025-10-21 13:15:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 13:15:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 13:15:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 13:15:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 13:15:23] 2.13.2.0 112940 151359 311808 151965 2 639 40656077 40960000 42784 16776704 0 600713523 99.832 262844092 30317 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-21 13:15:23] CVMFS is ok
[2025-10-21 13:15:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 13:15:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 13:15:23] Further information can be found at the LHC@home message board.
[2025-10-21 13:15:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 13:15:23] Checking for apptainer binary...
[2025-10-21 13:15:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 13:15:23] Running /usr/bin/apptainer --version
[2025-10-21 13:15:24] apptainer version 1.4.3-1.el9
[2025-10-21 13:15:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 13:15:24] c8-7-3.aglt2.org
[2025-10-21 13:15:24] apptainer works
[2025-10-21 13:15:24] Set ATHENA_PROC_NUMBER=8
[2025-10-21 13:15:24] Set ATHENA_CORE_NUMBER=8
[2025-10-21 13:15:24] Starting ATLAS job with PandaID=6853022118
[2025-10-21 13:15:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 15:14:03]  *** The last 200 lines of the pilot log: ***
[2025-10-21 15:14:03] 2025-10-21 19:13:07,717 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 15:14:03] 2025-10-21 19:13:07,722 | INFO     | fitting pss+swap vs Time
[2025-10-21 15:14:03] 2025-10-21 19:13:07,722 | INFO     | sum of square deviations: 424039792.9909904
[2025-10-21 15:14:03] 2025-10-21 19:13:07,723 | INFO     | sum of deviations: 24149126655.09912
[2025-10-21 15:14:03] 2025-10-21 19:13:07,723 | INFO     | mean x: 1761070554.0090091
[2025-10-21 15:14:03] 2025-10-21 19:13:07,723 | INFO     | mean y: 2225859.900900901
[2025-10-21 15:14:03] 2025-10-21 19:13:07,723 | INFO     | -- intersect: -100290993220.67899
[2025-10-21 15:14:03] 2025-10-21 19:13:07,723 | INFO     | intersect: -100290993220.67899
[2025-10-21 15:14:03] 2025-10-21 19:13:07,723 | INFO     | chi2: 7.030395323376537
[2025-10-21 15:14:03] 2025-10-21 19:13:07,723 | INFO     | sum of square deviations: 369276280.4905652
[2025-10-21 15:14:03] 2025-10-21 19:13:07,723 | INFO     | sum of deviations: 31317213212.698116
[2025-10-21 15:14:03] 2025-10-21 19:13:07,723 | INFO     | mean x: 1761070401.509434
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | mean y: 2245062.8018867923
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | -- intersect: -149348851014.57513
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | intersect: -149348851014.57513
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | chi2: 6.264821056293041
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | current chi2=6.264821056293041 (change=10.889491015361681 %)
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | right removable region: 105
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | sum of square deviations: 369275670.4905652
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | sum of deviations: -8150486505.320753
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | mean x: 1761070706.509434
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | mean y: 2315565.820754717
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | -- intersect: 38871876101.05118
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | intersect: 38871876101.05118
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | chi2: 2.466300488197142
[2025-10-21 15:14:03] 2025-10-21 19:13:07,724 | INFO     | current chi2=2.466300488197142 (change=64.91946221009042 %)
[2025-10-21 15:14:03] 2025-10-21 19:13:07,725 | INFO     | sum of square deviations: 319441872.9900984
[2025-10-21 15:14:03] 2025-10-21 19:13:07,725 | INFO     | sum of deviations: -24257298314.9703
[2025-10-21 15:14:03] 2025-10-21 19:13:07,725 | INFO     | mean x: 1761070859.009901
[2025-10-21 15:14:03] 2025-10-21 19:13:07,725 | INFO     | mean y: 2364349.9702970297
[2025-10-21 15:14:03] 2025-10-21 19:13:07,725 | INFO     | -- intersect: 133731924538.61938
[2025-10-21 15:14:03] 2025-10-21 19:13:07,725 | INFO     | intersect: 133731924538.61938
[2025-10-21 15:14:03] 2025-10-21 19:13:07,725 | INFO     | chi2: 1.1735717255011269
[2025-10-21 15:14:03] 2025-10-21 19:13:07,725 | INFO     | current chi2=1.1735717255011269 (change=52.41570396156374 %)
[2025-10-21 15:14:03] 2025-10-21 19:13:07,725 | INFO     | sum of square deviations: 274312120.0
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | sum of deviations: -26218808574.0
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | mean x: 1761071011.5
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | mean y: 2370821.5625
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | -- intersect: 168325898545.16092
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | intersect: 168325898545.16092
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | chi2: 1.0795019381117308
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | current chi2=1.0795019381117308 (change=8.015682837725777 %)
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | left removable region: 30
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | sum of square deviations: 130793150.0
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | sum of deviations: -6923460106.000001
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | mean x: 1761071286.0
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | mean y: 2348883.026666667
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | -- intersect: 93223643671.34792
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | intersect: 93223643671.34792
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | chi2: 0.11451868534138122
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | -- intersect: 93223643671.34792
[2025-10-21 15:14:03] 2025-10-21 19:13:07,730 | INFO     | current memory leak: -52.93 B/s (using 75 data points, chi2=0.11)
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | could have reported an average CPU frequency of 3791 MHz (7 samples)
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | ..............................
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | . Timing measurements:
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | . get job = 0 s
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | . initial setup = 6 s
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | . payload setup = 68 s
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | . stage-in = 0 s
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | . payload execution = 6790 s
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | . stage-out = 1 s
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | . log creation = 0 s
[2025-10-21 15:14:03] 2025-10-21 19:13:07,731 | INFO     | ..............................
[2025-10-21 15:14:03] 2025-10-21 19:13:07,826 | INFO     | 
[2025-10-21 15:14:03] 2025-10-21 19:13:07,826 | INFO     | job summary report
[2025-10-21 15:14:03] 2025-10-21 19:13:07,826 | INFO     | --------------------------------------------------
[2025-10-21 15:14:03] 2025-10-21 19:13:07,826 | INFO     | PanDA job id: 6853022118
[2025-10-21 15:14:03] 2025-10-21 19:13:07,826 | INFO     | task id: 46771637
[2025-10-21 15:14:03] 2025-10-21 19:13:07,826 | INFO     | errors: (none)
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | pilot state: finished 
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | transexitcode: 0
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | exeerrorcode: 0
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | exeerrordiag: 
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | exitcode: 0
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | exitmsg: OK
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | cpuconsumptiontime: 25628 s
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | nevents: 400
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | neventsw: 0
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | pid: 183892
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | pgrp: 183892
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | corecount: 8
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | event service: False
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | sizes: {0: 2348760, 1: 2348959, 12: 2348959, 23: 2348987, 33: 2349015, 38: 2349333, 44: 2349489, 6863: 2376653, 6866: 2385707, 6902: 2385845}
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | --------------------------------------------------
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | 
[2025-10-21 15:14:03] 2025-10-21 19:13:07,827 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,885 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 15:14:03] 2025-10-21 19:13:07,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,885 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 15:14:03] 2025-10-21 19:13:07,885 | INFO     | job 6853022118 has completed (purged errors)
[2025-10-21 15:14:03] 2025-10-21 19:13:07,885 | INFO     | overall cleanup function is called
[2025-10-21 15:14:03] 2025-10-21 19:13:08,893 | INFO     | --- collectZombieJob: --- 10, [183892]
[2025-10-21 15:14:03] 2025-10-21 19:13:08,893 | INFO     | zombie collector waiting for pid 183892
[2025-10-21 15:14:03] 2025-10-21 19:13:08,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 15:14:03] 2025-10-21 19:13:08,893 | INFO     | collected zombie processes
[2025-10-21 15:14:03] 2025-10-21 19:13:08,893 | INFO     | will attempt to kill all subprocesses of pid=183892
[2025-10-21 15:14:03] 2025-10-21 19:13:10,089 | INFO     | process IDs to be killed: [183892] (in reverse order)
[2025-10-21 15:14:03] 2025-10-21 19:13:10,387 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 15:14:03] 2025-10-21 19:13:10,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 15:14:03] 2025-10-21 19:13:10,535 | INFO     | did not find any defunct processes belonging to 183892
[2025-10-21 15:14:03] 2025-10-21 19:13:10,652 | INFO     | did not find any defunct processes belonging to 183892
[2025-10-21 15:14:03] 2025-10-21 19:13:10,652 | INFO     | ready for new job
[2025-10-21 15:14:03] 2025-10-21 19:13:10,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 15:14:03] 2025-10-21 19:13:10,654 | INFO     | ***************************************
[2025-10-21 15:14:03] 2025-10-21 19:13:10,654 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 15:14:03] 2025-10-21 19:13:10,654 | INFO     | ***************************************
[2025-10-21 15:14:03] 2025-10-21 19:13:10,654 | INFO     | 
[2025-10-21 15:14:03] 2025-10-21 19:13:10,677 | INFO     | architecture information:
[2025-10-21 15:14:03] 2025-10-21 19:13:10,681 | INFO     | executing command: cat /etc/os-release
[2025-10-21 15:14:03] 2025-10-21 19:13:10,716 | INFO     | cat /etc/os-release:
[2025-10-21 15:14:03] NAME="CentOS Linux"
[2025-10-21 15:14:03] VERSION="7 (Core)"
[2025-10-21 15:14:03] ID="centos"
[2025-10-21 15:14:03] ID_LIKE="rhel fedora"
[2025-10-21 15:14:03] VERSION_ID="7"
[2025-10-21 15:14:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 15:14:03] ANSI_COLOR="0;31"
[2025-10-21 15:14:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 15:14:03] HOME_URL="https://www.centos.org/"
[2025-10-21 15:14:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 15:14:03] 
[2025-10-21 15:14:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 15:14:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 15:14:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 15:14:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 15:14:03] 
[2025-10-21 15:14:03] 2025-10-21 19:13:10,716 | INFO     | ***************************************
[2025-10-21 15:14:03] 2025-10-21 19:13:11,220 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-21 15:14:03] 2025-10-21 19:13:11,261 | INFO     | sufficient remaining disk space (169234923520 B)
[2025-10-21 15:14:03] 2025-10-21 19:13:11,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 15:14:03] 2025-10-21 19:13:11,262 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 15:14:03] 2025-10-21 19:13:11,263 | INFO     | update_server=False
[2025-10-21 15:14:03] 2025-10-21 19:13:11,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 15:14:03] 2025-10-21 19:13:11,351 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-21 15:14:03] 2025-10-21 19:13:11,351 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-21 15:14:03] 2025-10-21 19:13:11,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 15:14:03] 2025-10-21 19:13:11,351 | INFO     | will abort loop
[2025-10-21 15:14:03] 2025-10-21 19:13:11,798 | INFO     | all payload control threads have been joined
[2025-10-21 15:14:03] 2025-10-21 19:13:12,212 | INFO     | all data control threads have been joined
[2025-10-21 15:14:03] 2025-10-21 19:13:12,269 | INFO     | [job] retrieve thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:12,357 | INFO     | [job] job monitor thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:12,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 15:14:03] 2025-10-21 19:13:12,607 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:12,628 | INFO     | [data] copytool_in thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:12,806 | INFO     | [payload] control thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:12,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 15:14:03] 2025-10-21 19:13:12,930 | INFO     | all job control threads have been joined
[2025-10-21 15:14:03] 2025-10-21 19:13:12,956 | INFO     | [payload] failed_post thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:12,996 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:13,218 | INFO     | [data] control thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:13,252 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:13,270 | INFO     | [payload] validate_post thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:13,412 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:13,638 | INFO     | [job] validate thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:13,849 | INFO     | [job] queue monitor thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:13,937 | INFO     | [job] control thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:14,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 15:14:03] 2025-10-21 19:13:14,496 | INFO     | [data] copytool_out thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:18,233 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 15:14:03] 2025-10-21 19:13:43,006 | INFO     | PID=140726 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 15:14:03] 2025-10-21 19:13:43,006 | INFO     | .. there are 45 such processes running
[2025-10-21 15:14:03] 2025-10-21 19:13:43,006 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 15:14:03] 2025-10-21 19:13:43,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 15:14:03] 2025-10-21 19:13:43,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 15:14:03] 2025-10-21 19:13:54,848 | INFO     | [monitor] cgroup control has ended
[2025-10-21 15:14:03] 2025-10-21 19:13:56,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140222912320)>', '<ExcThread(monitor, started 140139732915968)>']
[2025-10-21 15:14:03] 2025-10-21 19:13:57,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 15:14:03] 2025-10-21 19:13:57,133 | INFO     | [monitor] control thread has ended
[2025-10-21 15:14:03] 2025-10-21 19:14:01,445 | INFO     | all workflow threads have been joined
[2025-10-21 15:14:03] 2025-10-21 19:14:01,447 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 15:14:03] 2025-10-21 19:14:01,447 | INFO     | traces error code: 0
[2025-10-21 15:14:03] 2025-10-21 19:14:01,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 15:14:03] 2025-10-21 19:14:02,232 [wrapper] ==== pilot stdout END ====
[2025-10-21 15:14:03] 2025-10-21 19:14:02,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 15:14:03] 2025-10-21 19:14:02,271 [wrapper] pilotpid: 140726
[2025-10-21 15:14:03] 2025-10-21 19:14:02,290 [wrapper] Pilot exit status: 0
[2025-10-21 15:14:03] 2025-10-21 19:14:02,443 [wrapper] pandaids: 6853022118
[2025-10-21 15:14:03] 2025-10-21 19:14:02,675 [wrapper] cleanup supervisor_pilot 1095414 140727
[2025-10-21 15:14:03] 2025-10-21 19:14:02,730 [wrapper] Test setup, not cleaning
[2025-10-21 15:14:03] 2025-10-21 19:14:02,744 [wrapper] apfmon messages muted
[2025-10-21 15:14:03] 2025-10-21 19:14:02,766 [wrapper] ==== wrapper stdout END ====
[2025-10-21 15:14:03] 2025-10-21 19:14:02,780 [wrapper] ==== wrapper stderr END ====
[2025-10-21 15:14:03]  *** Error codes and diagnostics ***
[2025-10-21 15:14:03]     "exeErrorCode": 0,
[2025-10-21 15:14:03]     "exeErrorDiag": "",
[2025-10-21 15:14:03]     "pilotErrorCode": 0,
[2025-10-21 15:14:03]     "pilotErrorDiag": "",
[2025-10-21 15:14:03]  *** Listing of results directory ***
[2025-10-21 15:14:03] total 432568
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 21 05:00 pilot3.tar.gz
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 21 05:33 queuedata.json
[2025-10-21 15:14:03] -rwx------. 1 boincer umatlas     36292 Oct 21 05:33 runpilot2-wrapper.sh
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas       100 Oct 21 13:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 15:14:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 13:15 run_atlas
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas       105 Oct 21 13:15 job.xml
[2025-10-21 15:14:03] -rw-r--r--. 2 boincer umatlas 227577823 Oct 21 13:15 EVNT.46771634._002575.pool.root.1
[2025-10-21 15:14:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 13:15 start_atlas.sh
[2025-10-21 15:14:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 13:15 shared
[2025-10-21 15:14:03] -rw-r--r--. 2 boincer umatlas    569679 Oct 21 13:15 input.tar.gz
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas         0 Oct 21 13:15 boinc_lockfile
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas      2560 Oct 21 13:15 pandaJob.out
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas    978464 Oct 21 13:16 agis_schedconf.cvmfs.json
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas   1560740 Oct 21 13:16 agis_ddmendpoints.agis.ALL.json
[2025-10-21 15:14:03] drwx------. 5 boincer umatlas      4096 Oct 21 13:16 pilot3
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas 208909524 Oct 21 15:11 HITS.46771637._065157.pool.root.1
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas       530 Oct 21 15:11 boinc_task_state.xml
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas      1047 Oct 21 15:12 memory_monitor_summary.json
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas    365898 Oct 21 15:12 log.46771637._065157.job.log.tgz.1
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas        95 Oct 21 15:13 pilot_heartbeat.json
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas      7794 Oct 21 15:13 heartbeat.json
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas      7161 Oct 21 15:13 init_data.xml
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas      5010 Oct 21 15:14 pilotlog.txt
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas        27 Oct 21 15:14 wrapper_checkpoint.txt
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 15:14 boinc_mmap_file
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas    912281 Oct 21 15:14 log.46771637._065157.job.log.1
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas       357 Oct 21 15:14 output.list
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas       620 Oct 21 15:14 runtime_log
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas   1300480 Oct 21 15:14 result.tar.gz
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas       653 Oct 21 15:14 YexNDm3uNV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTHfMDmIxjTbm.diag
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas      8693 Oct 21 15:14 runtime_log.err
[2025-10-21 15:14:03] -rw-r--r--. 1 boincer umatlas     20982 Oct 21 15:14 stderr.txt
[2025-10-21 15:14:03] HITS file was successfully produced:
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas 208909524 Oct 21 15:11 shared/HITS.pool.root.1
[2025-10-21 15:14:03]  *** Contents of shared directory: ***
[2025-10-21 15:14:03] total 428112
[2025-10-21 15:14:03] -rw-r--r--. 2 boincer umatlas 227577823 Oct 21 13:15 ATLAS.root_0
[2025-10-21 15:14:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 13:15 start_atlas.sh
[2025-10-21 15:14:03] -rw-r--r--. 2 boincer umatlas    569679 Oct 21 13:15 input.tar.gz
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas 208909524 Oct 21 15:11 HITS.pool.root.1
[2025-10-21 15:14:03] -rw-------. 1 boincer umatlas   1300480 Oct 21 15:14 result.tar.gz
15:14:04 (130482): run_atlas exited; CPU time 25822.953740
15:14:04 (130482): called boinc_finish(0)

</stderr_txt>
]]>

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