Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:38:38 (2986857): wrapper (7.7.26015): starting
11:38:38 (2986857): wrapper: running run_atlas (--nthreads 10)
[2025-10-21 11:38:38] Arguments: --nthreads 10
[2025-10-21 11:38:38] Threads: 10
[2025-10-21 11:38:38] Checking for CVMFS
[2025-10-21 11:38:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 11:38:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 11:38:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 11:38:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 11:38:38] 2.13.2.0 317867 151148 421932 151964 3 758 23121750 40960001 31122 16776704 0 636524165 99.824 276541400 30456 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-21 11:38:38] CVMFS is ok
[2025-10-21 11:38:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 11:38:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 11:38:38] Further information can be found at the LHC@home message board.
[2025-10-21 11:38:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 11:38:38] Checking for apptainer binary...
[2025-10-21 11:38:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 11:38:38] Running /usr/bin/apptainer --version
[2025-10-21 11:38:38] apptainer version 1.4.3-1.el9
[2025-10-21 11:38:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 11:38:38] c8-6-11.aglt2.org
[2025-10-21 11:38:38] apptainer works
[2025-10-21 11:38:38] Set ATHENA_PROC_NUMBER=10
[2025-10-21 11:38:38] Set ATHENA_CORE_NUMBER=10
[2025-10-21 11:38:38] Starting ATLAS job with PandaID=6852991708
[2025-10-21 11:38:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 13:13:10]  *** The last 200 lines of the pilot log: ***
[2025-10-21 13:13:10] 2025-10-21 17:11:41,654 | INFO     | PID=2990747 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-21 13:13:10] 2025-10-21 17:11:41,654 | INFO     | .. there are 42 such processes running
[2025-10-21 13:13:10] 2025-10-21 17:11:42,677 | INFO     | time since job start (5568s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:11:43,215 | INFO     | monitor loop #360: job 0:6852991708 is in state 'finished'
[2025-10-21 13:13:10] 2025-10-21 17:11:43,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 13:13:10] 2025-10-21 17:11:44,684 | INFO     | time since job start (5570s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:11:45,758 | INFO     | monitor loop #361: job 0:6852991708 is in state 'finished'
[2025-10-21 13:13:10] 2025-10-21 17:11:45,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 13:13:10] 2025-10-21 17:11:46,691 | INFO     | time since job start (5572s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:11:48,272 | INFO     | monitor loop #362: job 0:6852991708 is in state 'finished'
[2025-10-21 13:13:10] 2025-10-21 17:11:48,272 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 13:13:10] 2025-10-21 17:11:48,700 | INFO     | time since job start (5574s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:11:50,715 | INFO     | time since job start (5576s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:11:50,789 | INFO     | monitor loop #363: job 0:6852991708 is in state 'finished'
[2025-10-21 13:13:10] 2025-10-21 17:11:50,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 13:13:10] 2025-10-21 17:11:52,737 | INFO     | time since job start (5578s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:11:53,294 | INFO     | monitor loop #364: job 0:6852991708 is in state 'finished'
[2025-10-21 13:13:10] 2025-10-21 17:11:53,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 13:13:10] 2025-10-21 17:11:54,752 | INFO     | time since job start (5580s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:11:55,813 | INFO     | monitor loop #365: job 0:6852991708 is in state 'finished'
[2025-10-21 13:13:10] 2025-10-21 17:11:55,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 13:13:10] 2025-10-21 17:11:56,759 | INFO     | time since job start (5582s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:11:58,329 | INFO     | monitor loop #366: job 0:6852991708 is in state 'finished'
[2025-10-21 13:13:10] 2025-10-21 17:11:58,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 13:13:10] 2025-10-21 17:11:58,771 | INFO     | time since job start (5584s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:12:00,787 | INFO     | time since job start (5586s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:12:00,836 | INFO     | monitor loop #367: job 0:6852991708 is in state 'finished'
[2025-10-21 13:13:10] 2025-10-21 17:12:00,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 13:13:10] 2025-10-21 17:12:02,804 | INFO     | time since job start (5588s) is within the limit (172800.0s)
[2025-10-21 13:13:10] 2025-10-21 17:12:03,341 | INFO     | monitor loop #368: job 0:6852991708 is in state 'finished'
[2025-10-21 13:13:10] 2025-10-21 17:12:03,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 13:13:10] 2025-10-21 17:12:05,542 | INFO     | PID=2990747 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 13:13:10] 2025-10-21 17:12:05,542 | INFO     | .. there are 42 such processes running
[2025-10-21 13:13:10] 2025-10-21 17:12:05,900 | INFO     | monitor loop #369: job 0:6852991708 is in state 'finished'
[2025-10-21 13:13:10] 2025-10-21 17:12:05,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 13:13:10] 2025-10-21 17:12:06,128 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-21 13:13:10] 2025-10-21 17:12:06,147 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3791.1919296875008
[2025-10-21 13:13:10] 2025-10-21 17:12:06,184 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6852991708/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 13:13:10] 2025-10-21 17:12:06,185 | INFO     | extracted standard info from prmon json
[2025-10-21 13:13:10] 2025-10-21 17:12:06,185 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 13:13:10] 2025-10-21 17:12:06,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 13:13:10] 2025-10-21 17:12:06,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 13:13:10] 2025-10-21 17:12:06,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 13:13:10] 2025-10-21 17:12:06,186 | INFO     | fitting pss+swap vs Time
[2025-10-21 13:13:10] 2025-10-21 17:12:06,186 | INFO     | sum of square deviations: 183760732.95238084
[2025-10-21 13:13:10] 2025-10-21 17:12:06,186 | INFO     | sum of deviations: -8498910635.380953
[2025-10-21 13:13:10] 2025-10-21 17:12:06,186 | INFO     | mean x: 1761064003.5238094
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | mean y: 2643253.6904761903
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | -- intersect: 81451630470.20096
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | intersect: 81451630470.20096
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | chi2: 0.024467446060519125
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | -- intersect: 81451630470.20096
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | current memory leak: -46.25 B/s (using 84 data points, chi2=0.02)
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | could have reported an average CPU frequency of 3769 MHz (7 samples)
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | ..............................
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | . Timing measurements:
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | . get job = 0 s
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | . initial setup = 2 s
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | . payload setup = 8 s
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | . stage-in = 0 s
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | . payload execution = 5522 s
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | . stage-out = 2 s
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | . log creation = 0 s
[2025-10-21 13:13:10] 2025-10-21 17:12:06,187 | INFO     | ..............................
[2025-10-21 13:13:10] 2025-10-21 17:12:06,347 | INFO     | 
[2025-10-21 13:13:10] 2025-10-21 17:12:06,347 | INFO     | job summary report
[2025-10-21 13:13:10] 2025-10-21 17:12:06,347 | INFO     | --------------------------------------------------
[2025-10-21 13:13:10] 2025-10-21 17:12:06,347 | INFO     | PanDA job id: 6852991708
[2025-10-21 13:13:10] 2025-10-21 17:12:06,347 | INFO     | task id: 46771637
[2025-10-21 13:13:10] 2025-10-21 17:12:06,347 | INFO     | errors: (none)
[2025-10-21 13:13:10] 2025-10-21 17:12:06,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 13:13:10] 2025-10-21 17:12:06,347 | INFO     | pilot state: finished 
[2025-10-21 13:13:10] 2025-10-21 17:12:06,347 | INFO     | transexitcode: 0
[2025-10-21 13:13:10] 2025-10-21 17:12:06,347 | INFO     | exeerrorcode: 0
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | exeerrordiag: 
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | exitcode: 0
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | exitmsg: OK
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | cpuconsumptiontime: 26602 s
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | nevents: 400
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | neventsw: 0
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | pid: 2997253
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | pgrp: 2997253
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | corecount: 10
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | event service: False
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | sizes: {0: 2348760, 1: 2348959, 7: 2349221, 11: 2349249, 5535: 2376097, 5538: 2385279, 5574: 2385417}
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | --------------------------------------------------
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | 
[2025-10-21 13:13:10] 2025-10-21 17:12:06,348 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-21 13:13:10] 2025-10-21 17:12:06,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,478 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,478 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | job 6852991708 has completed (purged errors)
[2025-10-21 13:13:10] 2025-10-21 17:12:06,479 | INFO     | overall cleanup function is called
[2025-10-21 13:13:10] 2025-10-21 17:12:07,487 | INFO     | --- collectZombieJob: --- 10, [2997253]
[2025-10-21 13:13:10] 2025-10-21 17:12:07,487 | INFO     | zombie collector waiting for pid 2997253
[2025-10-21 13:13:10] 2025-10-21 17:12:07,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 13:13:10] 2025-10-21 17:12:07,487 | INFO     | collected zombie processes
[2025-10-21 13:13:10] 2025-10-21 17:12:07,487 | INFO     | will attempt to kill all subprocesses of pid=2997253
[2025-10-21 13:13:10] 2025-10-21 17:12:08,952 | INFO     | process IDs to be killed: [2997253] (in reverse order)
[2025-10-21 13:13:10] 2025-10-21 17:12:09,396 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 13:13:10] 2025-10-21 17:12:09,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 13:13:10] 2025-10-21 17:12:09,438 | INFO     | did not find any defunct processes belonging to 2997253
[2025-10-21 13:13:10] 2025-10-21 17:12:09,487 | INFO     | did not find any defunct processes belonging to 2997253
[2025-10-21 13:13:10] 2025-10-21 17:12:09,488 | INFO     | ready for new job
[2025-10-21 13:13:10] 2025-10-21 17:12:09,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 13:13:10] 2025-10-21 17:12:09,489 | INFO     | ***************************************
[2025-10-21 13:13:10] 2025-10-21 17:12:09,489 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 13:13:10] 2025-10-21 17:12:09,489 | INFO     | ***************************************
[2025-10-21 13:13:10] 2025-10-21 17:12:09,489 | INFO     | 
[2025-10-21 13:13:10] 2025-10-21 17:12:09,495 | INFO     | architecture information:
[2025-10-21 13:13:10] 2025-10-21 17:12:09,499 | INFO     | executing command: cat /etc/os-release
[2025-10-21 13:13:10] 2025-10-21 17:12:09,594 | INFO     | cat /etc/os-release:
[2025-10-21 13:13:10] NAME="CentOS Linux"
[2025-10-21 13:13:10] VERSION="7 (Core)"
[2025-10-21 13:13:10] ID="centos"
[2025-10-21 13:13:10] ID_LIKE="rhel fedora"
[2025-10-21 13:13:10] VERSION_ID="7"
[2025-10-21 13:13:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 13:13:10] ANSI_COLOR="0;31"
[2025-10-21 13:13:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 13:13:10] HOME_URL="https://www.centos.org/"
[2025-10-21 13:13:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 13:13:10] 
[2025-10-21 13:13:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 13:13:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 13:13:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 13:13:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 13:13:10] 
[2025-10-21 13:13:10] 2025-10-21 17:12:09,594 | INFO     | ***************************************
[2025-10-21 13:13:10] 2025-10-21 17:12:10,103 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-21 13:13:10] 2025-10-21 17:12:10,236 | INFO     | sufficient remaining disk space (169932226560 B)
[2025-10-21 13:13:10] 2025-10-21 17:12:10,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 13:13:10] 2025-10-21 17:12:10,236 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 13:13:10] 2025-10-21 17:12:10,236 | INFO     | update_server=False
[2025-10-21 13:13:10] 2025-10-21 17:12:10,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 13:13:10] 2025-10-21 17:12:10,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 13:13:10] 2025-10-21 17:12:10,236 | INFO     | aborting loop
[2025-10-21 13:13:10] 2025-10-21 17:12:10,287 | INFO     | all data control threads have been joined
[2025-10-21 13:13:10] 2025-10-21 17:12:10,329 | INFO     | all job control threads have been joined
[2025-10-21 13:13:10] 2025-10-21 17:12:10,517 | INFO     | all payload control threads have been joined
[2025-10-21 13:13:10] 2025-10-21 17:12:11,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 13:13:10] 2025-10-21 17:12:11,244 | INFO     | [job] retrieve thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:11,244 | INFO     | [job] job monitor thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:11,293 | INFO     | [data] control thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:11,342 | INFO     | [job] control thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:11,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 13:13:10] 2025-10-21 17:12:11,523 | INFO     | [payload] control thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:12,001 | INFO     | [job] validate thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:12,002 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:12,093 | INFO     | [payload] validate_post thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:12,379 | INFO     | [job] queue monitor thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:12,417 | INFO     | [data] copytool_in thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:12,438 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:12,438 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:12,597 | INFO     | [payload] failed_post thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:12,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 13:13:10] 2025-10-21 17:12:13,053 | INFO     | [data] copytool_out thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:16,678 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:20,422 | INFO     | job.realtimelogging is not enabled
[2025-10-21 13:13:10] 2025-10-21 17:12:21,428 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 13:13:10] 2025-10-21 17:12:39,550 | INFO     | PID=2990747 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 13:13:10] 2025-10-21 17:12:39,550 | INFO     | .. there are 42 such processes running
[2025-10-21 13:13:10] 2025-10-21 17:12:39,551 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 13:13:10] 2025-10-21 17:12:39,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 13:13:10] 2025-10-21 17:12:39,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 13:13:10] 2025-10-21 17:13:03,410 | INFO     | [monitor] cgroup control has ended
[2025-10-21 13:13:10] 2025-10-21 17:13:03,906 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600395904832)>', '<ExcThread(monitor, started 140599906789120)>']
[2025-10-21 13:13:10] 2025-10-21 17:13:04,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 13:13:10] 2025-10-21 17:13:04,729 | INFO     | [monitor] control thread has ended
[2025-10-21 13:13:10] 2025-10-21 17:13:08,931 | INFO     | all workflow threads have been joined
[2025-10-21 13:13:10] 2025-10-21 17:13:08,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 13:13:10] 2025-10-21 17:13:08,950 | INFO     | traces error code: 0
[2025-10-21 13:13:10] 2025-10-21 17:13:08,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 13:13:10] 2025-10-21 17:13:09,431 [wrapper] ==== pilot stdout END ====
[2025-10-21 13:13:10] 2025-10-21 17:13:09,448 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 13:13:10] 2025-10-21 17:13:09,477 [wrapper] pilotpid: 2990747
[2025-10-21 13:13:10] 2025-10-21 17:13:09,496 [wrapper] Pilot exit status: 0
[2025-10-21 13:13:10] 2025-10-21 17:13:09,609 [wrapper] pandaids: 6852991708
[2025-10-21 13:13:10] 2025-10-21 17:13:09,787 [wrapper] cleanup supervisor_pilot 3945936 2990748
[2025-10-21 13:13:10] 2025-10-21 17:13:09,811 [wrapper] Test setup, not cleaning
[2025-10-21 13:13:10] 2025-10-21 17:13:09,833 [wrapper] apfmon messages muted
[2025-10-21 13:13:10] 2025-10-21 17:13:09,871 [wrapper] ==== wrapper stdout END ====
[2025-10-21 13:13:10] 2025-10-21 17:13:09,887 [wrapper] ==== wrapper stderr END ====
[2025-10-21 13:13:10]  *** Error codes and diagnostics ***
[2025-10-21 13:13:10]     "exeErrorCode": 0,
[2025-10-21 13:13:10]     "exeErrorDiag": "",
[2025-10-21 13:13:10]     "pilotErrorCode": 0,
[2025-10-21 13:13:10]     "pilotErrorDiag": "",
[2025-10-21 13:13:10]  *** Listing of results directory ***
[2025-10-21 13:13:10] total 433348
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 21 03:34 pilot3.tar.gz
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 21 04:05 queuedata.json
[2025-10-21 13:13:10] -rwx------. 1 boincer umatlas     36292 Oct 21 04:05 runpilot2-wrapper.sh
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas       100 Oct 21 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 13:13:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 11:38 run_atlas
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas       105 Oct 21 11:38 job.xml
[2025-10-21 13:13:10] -rw-r--r--. 2 boincer umatlas 228491745 Oct 21 11:38 EVNT.46771634._002520.pool.root.1
[2025-10-21 13:13:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 11:38 start_atlas.sh
[2025-10-21 13:13:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 11:38 shared
[2025-10-21 13:13:10] -rw-r--r--. 2 boincer umatlas    569678 Oct 21 11:38 input.tar.gz
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas         0 Oct 21 11:38 boinc_lockfile
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas      2560 Oct 21 11:38 pandaJob.out
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas    978873 Oct 21 11:38 agis_schedconf.cvmfs.json
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas   1560740 Oct 21 11:38 agis_ddmendpoints.agis.ALL.json
[2025-10-21 13:13:10] drwx------. 5 boincer umatlas      4096 Oct 21 11:38 pilot3
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas 209071839 Oct 21 13:10 HITS.46771637._063806.pool.root.1
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas       529 Oct 21 13:10 boinc_task_state.xml
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas      1051 Oct 21 13:11 memory_monitor_summary.json
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas    377532 Oct 21 13:11 log.46771637._063806.job.log.tgz.1
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas      7821 Oct 21 13:12 heartbeat.json
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas      7161 Oct 21 13:12 init_data.xml
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas        95 Oct 21 13:12 pilot_heartbeat.json
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas        27 Oct 21 13:13 wrapper_checkpoint.txt
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas      4897 Oct 21 13:13 pilotlog.txt
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas    764482 Oct 21 13:13 log.46771637._063806.job.log.1
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas       357 Oct 21 13:13 output.list
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas       620 Oct 21 13:13 runtime_log
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas   1157120 Oct 21 13:13 result.tar.gz
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas       655 Oct 21 13:13 ZcgMDmHYMV8n9Rq4apOajLDm4fhM0noT9bVof3QYDm08eMDmBeqzin.diag
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas      8700 Oct 21 13:13 runtime_log.err
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 13:13 boinc_mmap_file
[2025-10-21 13:13:10] -rw-r--r--. 1 boincer umatlas     22368 Oct 21 13:13 stderr.txt
[2025-10-21 13:13:10] HITS file was successfully produced:
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas 209071839 Oct 21 13:10 shared/HITS.pool.root.1
[2025-10-21 13:13:10]  *** Contents of shared directory: ***
[2025-10-21 13:13:10] total 429024
[2025-10-21 13:13:10] -rw-r--r--. 2 boincer umatlas 228491745 Oct 21 11:38 ATLAS.root_0
[2025-10-21 13:13:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 11:38 start_atlas.sh
[2025-10-21 13:13:10] -rw-r--r--. 2 boincer umatlas    569678 Oct 21 11:38 input.tar.gz
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas 209071839 Oct 21 13:10 HITS.pool.root.1
[2025-10-21 13:13:10] -rw-------. 1 boincer umatlas   1157120 Oct 21 13:13 result.tar.gz
13:13:33 (2986857): run_atlas exited; CPU time 26741.737527
13:13:33 (2986857): called boinc_finish(0)

</stderr_txt>
]]>

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