Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:21:27 (21477): wrapper (7.7.26015): starting
11:21:27 (21477): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 11:21:27] Arguments: --nthreads 8
[2025-10-21 11:21:27] Threads: 8
[2025-10-21 11:21:27] Checking for CVMFS
[2025-10-21 11:21:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 11:21:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 11:21:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 11:21:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 11:21:28] 2.11.2.0 3026 26944 79656 151964 2 56 13249975 20275200 1 130560 0 15154429 99.981 1210581 37033 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-21 11:21:28] CVMFS is ok
[2025-10-21 11:21:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 11:21:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 11:21:28] Further information can be found at the LHC@home message board.
[2025-10-21 11:21:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 11:21:28] Checking for apptainer binary...
[2025-10-21 11:21:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 11:21:28] Running /usr/bin/apptainer --version
[2025-10-21 11:21:28] apptainer version 1.3.2-1.el7
[2025-10-21 11:21:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 11:21:30] c-204-25.aglt2.org
[2025-10-21 11:21:30] apptainer works
[2025-10-21 11:21:30] Set ATHENA_PROC_NUMBER=8
[2025-10-21 11:21:30] Set ATHENA_CORE_NUMBER=8
[2025-10-21 11:21:30] Starting ATLAS job with PandaID=6853027456
[2025-10-21 11:21:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 13:37:07]  *** The last 200 lines of the pilot log: ***
[2025-10-21 13:37:07] 2025-10-21 17:36:35,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 13:37:07] 2025-10-21 17:36:35,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 13:37:07] 2025-10-21 17:36:35,087 | INFO     | fitting pss+swap vs Time
[2025-10-21 13:37:07] 2025-10-21 17:36:35,088 | INFO     | sum of square deviations: 713140813.0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,088 | INFO     | sum of deviations: -9535406357.000004
[2025-10-21 13:37:07] 2025-10-21 17:36:35,089 | INFO     | mean x: 1761064134.5
[2025-10-21 13:37:07] 2025-10-21 17:36:35,089 | INFO     | mean y: 2570641.106060606
[2025-10-21 13:37:07] 2025-10-21 17:36:35,089 | INFO     | -- intersect: 23549760532.755142
[2025-10-21 13:37:07] 2025-10-21 17:36:35,089 | INFO     | intersect: 23549760532.755142
[2025-10-21 13:37:07] 2025-10-21 17:36:35,090 | INFO     | chi2: 1.6474251585418125
[2025-10-21 13:37:07] 2025-10-21 17:36:35,090 | INFO     | sum of square deviations: 635130048.0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,090 | INFO     | sum of deviations: -8279203528.000003
[2025-10-21 13:37:07] 2025-10-21 17:36:35,091 | INFO     | mean x: 1761063982.0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,091 | INFO     | mean y: 2573097.9842519686
[2025-10-21 13:37:07] 2025-10-21 17:36:35,091 | INFO     | -- intersect: 22958827771.68556
[2025-10-21 13:37:07] 2025-10-21 17:36:35,091 | INFO     | intersect: 22958827771.68556
[2025-10-21 13:37:07] 2025-10-21 17:36:35,091 | INFO     | chi2: 1.6482993096275846
[2025-10-21 13:37:07] 2025-10-21 17:36:35,091 | INFO     | current chi2=1.6482993096275846 (change=-0.053061656928069204 %)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,091 | INFO     | right removable region: 126
[2025-10-21 13:37:07] 2025-10-21 17:36:35,092 | INFO     | sum of square deviations: 635130048.0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,092 | INFO     | sum of deviations: -30030366124.0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,093 | INFO     | mean x: 1761064287.0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,093 | INFO     | mean y: 2610032.7322834646
[2025-10-21 13:37:07] 2025-10-21 17:36:35,093 | INFO     | sufficient remaining disk space (18525192192 B)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,093 | INFO     | -- intersect: 83269659785.84209
[2025-10-21 13:37:07] 2025-10-21 17:36:35,094 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,094 | INFO     | intersect: 83269659785.84209
[2025-10-21 13:37:07] 2025-10-21 17:36:35,094 | INFO     | chi2: 0.13301048586299535
[2025-10-21 13:37:07] 2025-10-21 17:36:35,094 | INFO     | current chi2=0.13301048586299535 (change=91.92615912332387 %)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,095 | INFO     | sum of square deviations: 563026370.5
[2025-10-21 13:37:07] 2025-10-21 17:36:35,095 | INFO     | sum of deviations: -29075988519.499996
[2025-10-21 13:37:07] 2025-10-21 17:36:35,095 | INFO     | mean x: 1761064439.5
[2025-10-21 13:37:07] 2025-10-21 17:36:35,096 | INFO     | mean y: 2607924.024590164
[2025-10-21 13:37:07] 2025-10-21 17:36:35,096 | INFO     | -- intersect: 90948062893.61859
[2025-10-21 13:37:07] 2025-10-21 17:36:35,096 | INFO     | intersect: 90948062893.61859
[2025-10-21 13:37:07] 2025-10-21 17:36:35,096 | INFO     | chi2: 0.11129675673981866
[2025-10-21 13:37:07] 2025-10-21 17:36:35,096 | INFO     | current chi2=0.11129675673981866 (change=16.324825055930148 %)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,096 | INFO     | left removable region: 20
[2025-10-21 13:37:07] 2025-10-21 17:36:35,097 | INFO     | sum of square deviations: 369281342.5
[2025-10-21 13:37:07] 2025-10-21 17:36:35,097 | INFO     | sum of deviations: -20982854389.499996
[2025-10-21 13:37:07] 2025-10-21 17:36:35,097 | INFO     | mean x: 1761064561.5
[2025-10-21 13:37:07] 2025-10-21 17:36:35,098 | INFO     | mean y: 2597393.537735849
[2025-10-21 13:37:07] 2025-10-21 17:36:35,098 | INFO     | -- intersect: 100067661645.9056
[2025-10-21 13:37:07] 2025-10-21 17:36:35,098 | INFO     | intersect: 100067661645.9056
[2025-10-21 13:37:07] 2025-10-21 17:36:35,098 | INFO     | chi2: 0.10312668679653296
[2025-10-21 13:37:07] 2025-10-21 17:36:35,098 | INFO     | -- intersect: 100067661645.9056
[2025-10-21 13:37:07] 2025-10-21 17:36:35,099 | INFO     | current memory leak: -56.82 B/s (using 106 data points, chi2=0.10)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,099 | INFO     | could have reported an average CPU frequency of 2003 MHz (8 samples)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,099 | INFO     | ..............................
[2025-10-21 13:37:07] 2025-10-21 17:36:35,099 | INFO     | . Timing measurements:
[2025-10-21 13:37:07] 2025-10-21 17:36:35,100 | INFO     | . get job = 0 s
[2025-10-21 13:37:07] 2025-10-21 17:36:35,100 | INFO     | . initial setup = 2 s
[2025-10-21 13:37:07] 2025-10-21 17:36:35,100 | INFO     | . payload setup = 8 s
[2025-10-21 13:37:07] 2025-10-21 17:36:35,100 | INFO     | . stage-in = 0 s
[2025-10-21 13:37:07] 2025-10-21 17:36:35,100 | INFO     | . payload execution = 8049 s
[2025-10-21 13:37:07] 2025-10-21 17:36:35,100 | INFO     | . stage-out = 0 s
[2025-10-21 13:37:07] 2025-10-21 17:36:35,101 | INFO     | . log creation = 0 s
[2025-10-21 13:37:07] 2025-10-21 17:36:35,101 | INFO     | ..............................
[2025-10-21 13:37:07] 2025-10-21 17:36:35,192 | INFO     | 
[2025-10-21 13:37:07] 2025-10-21 17:36:35,192 | INFO     | job summary report
[2025-10-21 13:37:07] 2025-10-21 17:36:35,192 | INFO     | --------------------------------------------------
[2025-10-21 13:37:07] 2025-10-21 17:36:35,193 | INFO     | PanDA job id: 6853027456
[2025-10-21 13:37:07] 2025-10-21 17:36:35,193 | INFO     | task id: 46771637
[2025-10-21 13:37:07] 2025-10-21 17:36:35,193 | INFO     | errors: (none)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 13:37:07] 2025-10-21 17:36:35,193 | INFO     | pilot state: finished 
[2025-10-21 13:37:07] 2025-10-21 17:36:35,193 | INFO     | transexitcode: 0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,193 | INFO     | exeerrorcode: 0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,194 | INFO     | exeerrordiag: 
[2025-10-21 13:37:07] 2025-10-21 17:36:35,194 | INFO     | exitcode: 0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,194 | INFO     | exitmsg: OK
[2025-10-21 13:37:07] 2025-10-21 17:36:35,194 | INFO     | cpuconsumptiontime: 60694 s
[2025-10-21 13:37:07] 2025-10-21 17:36:35,194 | INFO     | nevents: 400
[2025-10-21 13:37:07] 2025-10-21 17:36:35,194 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6853027456: 3579871 B (within 2537553920 B limit)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,195 | INFO     | neventsw: 0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,195 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6853027456/HITS.46771637._066047.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,195 | INFO     | pid: 31773
[2025-10-21 13:37:07] 2025-10-21 17:36:35,195 | INFO     | total size of present files: 0 B (workdir size: 3579871 B)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,195 | INFO     | pgrp: 31773
[2025-10-21 13:37:07] 2025-10-21 17:36:35,196 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6853027456/HITS.46771637._066047.pool.root.1 since it does not exist
[2025-10-21 13:37:07] 2025-10-21 17:36:35,196 | INFO     | corecount: 8
[2025-10-21 13:37:07] 2025-10-21 17:36:35,196 | INFO     | event service: False
[2025-10-21 13:37:07] 2025-10-21 17:36:35,197 | INFO     | sizes: {0: 2348760, 1: 2348959, 7: 2349221, 12: 2349249, 8061: 2376963, 8063: 2385961, 8064: 2386145, 8070: 2386339}
[2025-10-21 13:37:07] 2025-10-21 17:36:35,197 | INFO     | --------------------------------------------------
[2025-10-21 13:37:07] 2025-10-21 17:36:35,197 | INFO     | 
[2025-10-21 13:37:07] 2025-10-21 17:36:35,197 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 13:37:07] 2025-10-21 17:36:35,223 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,224 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,224 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,224 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,226 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,226 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,226 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,226 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,227 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 13:37:07] 2025-10-21 17:36:35,228 | INFO     | job 6853027456 has completed (purged errors)
[2025-10-21 13:37:07] 2025-10-21 17:36:35,228 | INFO     | overall cleanup function is called
[2025-10-21 13:37:07] 2025-10-21 17:36:35,300 | INFO     | number of running child processes to parent process 31773: 1
[2025-10-21 13:37:07] 2025-10-21 17:36:35,300 | INFO     | maximum number of monitored processes: 6
[2025-10-21 13:37:07] 2025-10-21 17:36:35,300 | INFO     | aborting job monitoring since job object (job id=6853027456) has expired
[2025-10-21 13:37:07] 2025-10-21 17:36:36,234 | INFO     | --- collectZombieJob: --- 10, [31773]
[2025-10-21 13:37:07] 2025-10-21 17:36:36,234 | INFO     | zombie collector waiting for pid 31773
[2025-10-21 13:37:07] 2025-10-21 17:36:36,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 13:37:07] 2025-10-21 17:36:36,242 | INFO     | collected zombie processes
[2025-10-21 13:37:07] 2025-10-21 17:36:36,242 | INFO     | will attempt to kill all subprocesses of pid=31773
[2025-10-21 13:37:07] 2025-10-21 17:36:36,329 | INFO     | process IDs to be killed: [31773] (in reverse order)
[2025-10-21 13:37:07] 2025-10-21 17:36:36,445 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 13:37:07] 2025-10-21 17:36:36,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 13:37:07] 2025-10-21 17:36:36,449 | INFO     | did not find any defunct processes belonging to 31773
[2025-10-21 13:37:07] 2025-10-21 17:36:36,451 | INFO     | did not find any defunct processes belonging to 31773
[2025-10-21 13:37:07] 2025-10-21 17:36:36,452 | INFO     | ready for new job
[2025-10-21 13:37:07] 2025-10-21 17:36:36,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 13:37:07] 2025-10-21 17:36:36,453 | INFO     | ***************************************
[2025-10-21 13:37:07] 2025-10-21 17:36:36,454 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 13:37:07] 2025-10-21 17:36:36,454 | INFO     | ***************************************
[2025-10-21 13:37:07] 2025-10-21 17:36:36,454 | INFO     | 
[2025-10-21 13:37:07] 2025-10-21 17:36:36,454 | INFO     | architecture information:
[2025-10-21 13:37:07] 2025-10-21 17:36:36,455 | INFO     | executing command: cat /etc/os-release
[2025-10-21 13:37:07] 2025-10-21 17:36:36,475 | INFO     | cat /etc/os-release:
[2025-10-21 13:37:07] NAME="CentOS Linux"
[2025-10-21 13:37:07] VERSION="7 (Core)"
[2025-10-21 13:37:07] ID="centos"
[2025-10-21 13:37:07] ID_LIKE="rhel fedora"
[2025-10-21 13:37:07] VERSION_ID="7"
[2025-10-21 13:37:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 13:37:07] ANSI_COLOR="0;31"
[2025-10-21 13:37:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 13:37:07] HOME_URL="https://www.centos.org/"
[2025-10-21 13:37:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 13:37:07] 
[2025-10-21 13:37:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 13:37:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 13:37:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 13:37:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 13:37:07] 
[2025-10-21 13:37:07] 2025-10-21 17:36:36,476 | INFO     | ***************************************
[2025-10-21 13:37:07] 2025-10-21 17:36:36,979 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 13:37:07] 2025-10-21 17:36:36,998 | INFO     | sufficient remaining disk space (18529386496 B)
[2025-10-21 13:37:07] 2025-10-21 17:36:36,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 13:37:07] 2025-10-21 17:36:36,999 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 13:37:07] 2025-10-21 17:36:36,999 | INFO     | update_server=False
[2025-10-21 13:37:07] 2025-10-21 17:36:36,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 13:37:07] 2025-10-21 17:36:37,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 13:37:07] 2025-10-21 17:36:37,000 | INFO     | aborting loop
[2025-10-21 13:37:07] 2025-10-21 17:36:37,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 13:37:07] 2025-10-21 17:36:37,872 | INFO     | all data control threads have been joined
[2025-10-21 13:37:07] 2025-10-21 17:36:38,005 | INFO     | [job] retrieve thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:38,006 | INFO     | [job] queue monitor thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:38,006 | INFO     | [job] job monitor thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:38,031 | INFO     | all payload control threads have been joined
[2025-10-21 13:37:07] 2025-10-21 17:36:38,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:38,081 | INFO     | all job control threads have been joined
[2025-10-21 13:37:07] 2025-10-21 17:36:38,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 13:37:07] 2025-10-21 17:36:38,584 | INFO     | [job] validate thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:38,607 | INFO     | [payload] validate_post thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:38,798 | INFO     | [payload] failed_post thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:38,878 | INFO     | [data] control thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:39,037 | INFO     | [payload] control thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:39,087 | INFO     | [job] control thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:39,100 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:39,110 | INFO     | [data] copytool_in thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:39,320 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:39,346 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:39,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 13:37:07] 2025-10-21 17:36:40,223 | INFO     | [data] copytool_out thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:43,549 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 13:37:07] 2025-10-21 17:36:45,536 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-10-21 13:37:07] 2025-10-21 17:37:00,523 | INFO     | [monitor] cgroup control has ended
[2025-10-21 13:37:07] 2025-10-21 17:37:01,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640009893696)>', '<ExcThread(monitor, started 139639411156736)>']
[2025-10-21 13:37:07] 2025-10-21 17:37:06,114 | INFO     | all workflow threads have been joined
[2025-10-21 13:37:07] 2025-10-21 17:37:06,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 13:37:07] 2025-10-21 17:37:06,123 | INFO     | traces error code: 0
[2025-10-21 13:37:07] 2025-10-21 17:37:06,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 13:37:07] 2025-10-21 17:37:06,739 | INFO     | PID=25264 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 13:37:07] 2025-10-21 17:37:06,740 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 13:37:07] 2025-10-21 17:37:06,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 13:37:07] 2025-10-21 17:37:06,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 13:37:07] 2025-10-21 17:37:06,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 13:37:07] 2025-10-21 17:37:06,741 | INFO     | [monitor] control thread has ended
[2025-10-21 13:37:07] 2025-10-21 17:37:06,871 [wrapper] ==== pilot stdout END ====
[2025-10-21 13:37:07] 2025-10-21 17:37:06,875 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 13:37:07] 2025-10-21 17:37:06,880 [wrapper] pilotpid: 25264
[2025-10-21 13:37:07] 2025-10-21 17:37:06,884 [wrapper] Pilot exit status: 0
[2025-10-21 13:37:07] 2025-10-21 17:37:06,900 [wrapper] pandaids: 6853027456
[2025-10-21 13:37:07] 2025-10-21 17:37:06,943 [wrapper] cleanup supervisor_pilot 31296 25265
[2025-10-21 13:37:07] 2025-10-21 17:37:06,948 [wrapper] Test setup, not cleaning
[2025-10-21 13:37:07] 2025-10-21 17:37:06,953 [wrapper] apfmon messages muted
[2025-10-21 13:37:07] 2025-10-21 17:37:06,957 [wrapper] ==== wrapper stdout END ====
[2025-10-21 13:37:07] 2025-10-21 17:37:06,962 [wrapper] ==== wrapper stderr END ====
[2025-10-21 13:37:07]  *** Error codes and diagnostics ***
[2025-10-21 13:37:07]     "exeErrorCode": 0,
[2025-10-21 13:37:07]     "exeErrorDiag": "",
[2025-10-21 13:37:07]     "pilotErrorCode": 0,
[2025-10-21 13:37:07]     "pilotErrorDiag": "",
[2025-10-21 13:37:07]  *** Listing of results directory ***
[2025-10-21 13:37:07] total 427772
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas    557409 Oct 21 06:23 pilot3.tar.gz
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas      5112 Oct 21 06:30 queuedata.json
[2025-10-21 13:37:07] -rwx------ 1 boincer umatlas     36292 Oct 21 06:33 runpilot2-wrapper.sh
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas       100 Oct 21 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 13:37:07] -rwxr-xr-x 1 boincer umatlas      7986 Oct 21 11:21 run_atlas
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas       105 Oct 21 11:21 job.xml
[2025-10-21 13:37:07] -rw-r--r-- 2 boincer umatlas 227240329 Oct 21 11:21 EVNT.46771634._002613.pool.root.1
[2025-10-21 13:37:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 11:21 start_atlas.sh
[2025-10-21 13:37:07] drwxrwx--x 2 boincer umatlas      4096 Oct 21 11:21 shared
[2025-10-21 13:37:07] -rw-r--r-- 2 boincer umatlas    569675 Oct 21 11:21 input.tar.gz
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas         0 Oct 21 11:21 boinc_lockfile
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas      2560 Oct 21 11:21 pandaJob.out
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas    978873 Oct 21 11:21 agis_schedconf.cvmfs.json
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas   1560740 Oct 21 11:21 agis_ddmendpoints.agis.ALL.json
[2025-10-21 13:37:07] drwx------ 5 boincer umatlas      4096 Oct 21 11:21 pilot3
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas      5910 Oct 21 13:28 init_data.xml
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas 203887756 Oct 21 13:35 HITS.46771637._066047.pool.root.1
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas       530 Oct 21 13:35 boinc_task_state.xml
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas      1049 Oct 21 13:36 memory_monitor_summary.json
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas    370824 Oct 21 13:36 log.46771637._066047.job.log.tgz.1
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas      7846 Oct 21 13:36 heartbeat.json
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas      8192 Oct 21 13:37 boinc_mmap_file
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas        27 Oct 21 13:37 wrapper_checkpoint.txt
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas        95 Oct 21 13:37 pilot_heartbeat.json
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas       745 Oct 21 13:37 pilotlog.txt
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas   1132973 Oct 21 13:37 log.46771637._066047.job.log.1
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas       357 Oct 21 13:37 output.list
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas       620 Oct 21 13:37 runtime_log
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas   1525760 Oct 21 13:37 result.tar.gz
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas       660 Oct 21 13:37 Uz2NDmfrOV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxH2NDmTw6l6m.diag
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas      8703 Oct 21 13:37 runtime_log.err
[2025-10-21 13:37:07] -rw-r--r-- 1 boincer umatlas     21327 Oct 21 13:37 stderr.txt
[2025-10-21 13:37:07] HITS file was successfully produced:
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas 203887756 Oct 21 13:35 shared/HITS.pool.root.1
[2025-10-21 13:37:07]  *** Contents of shared directory: ***
[2025-10-21 13:37:07] total 423100
[2025-10-21 13:37:07] -rw-r--r-- 2 boincer umatlas 227240329 Oct 21 11:21 ATLAS.root_0
[2025-10-21 13:37:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 11:21 start_atlas.sh
[2025-10-21 13:37:07] -rw-r--r-- 2 boincer umatlas    569675 Oct 21 11:21 input.tar.gz
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas 203887756 Oct 21 13:35 HITS.pool.root.1
[2025-10-21 13:37:07] -rw------- 1 boincer umatlas   1525760 Oct 21 13:37 result.tar.gz
13:37:08 (21477): run_atlas exited; CPU time 60641.167323
13:37:08 (21477): called boinc_finish(0)

</stderr_txt>
]]>

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