Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:48:07 (1216600): wrapper (7.7.26015): starting
03:48:07 (1216600): wrapper: running run_atlas (--nthreads 3)
[2025-10-22 03:48:07] Arguments: --nthreads 3
[2025-10-22 03:48:07] Threads: 3
[2025-10-22 03:48:07] Checking for CVMFS
[2025-10-22 03:48:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 03:48:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 03:48:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 03:48:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 03:48:07] 2.9.2.0 788955 1464 79908 151977 3 57 31309979 36864000 0 130560 0 1127328 99.989 53364 2510 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-22 03:48:07] CVMFS is ok
[2025-10-22 03:48:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 03:48:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 03:48:07] Further information can be found at the LHC@home message board.
[2025-10-22 03:48:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 03:48:07] Checking for apptainer binary...
[2025-10-22 03:48:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 03:48:07] Running /usr/bin/apptainer --version
[2025-10-22 03:48:07] apptainer version 1.4.1-1.1
[2025-10-22 03:48:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 03:48:07] magicA161
[2025-10-22 03:48:07] apptainer works
[2025-10-22 03:48:07] Set ATHENA_PROC_NUMBER=3
[2025-10-22 03:48:07] Set ATHENA_CORE_NUMBER=3
[2025-10-22 03:48:07] Starting ATLAS job with PandaID=6853026712
[2025-10-22 03:48:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 05:14:36]  *** The last 200 lines of the pilot log: ***
[2025-10-22 05:14:36] 2025-10-22 03:14:05,532 | INFO     | executing command: cat /etc/os-release
[2025-10-22 05:14:36] 2025-10-22 03:14:05,541 | INFO     | cat /etc/os-release:
[2025-10-22 05:14:36] NAME="CentOS Linux"
[2025-10-22 05:14:36] VERSION="7 (Core)"
[2025-10-22 05:14:36] ID="centos"
[2025-10-22 05:14:36] ID_LIKE="rhel fedora"
[2025-10-22 05:14:36] VERSION_ID="7"
[2025-10-22 05:14:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 05:14:36] ANSI_COLOR="0;31"
[2025-10-22 05:14:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 05:14:36] HOME_URL="https://www.centos.org/"
[2025-10-22 05:14:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 05:14:36] 
[2025-10-22 05:14:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 05:14:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 05:14:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 05:14:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 05:14:36] 
[2025-10-22 05:14:36] 2025-10-22 03:14:05,541 | INFO     | ***************************************
[2025-10-22 05:14:36] 2025-10-22 03:14:06,044 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-22 05:14:36] 2025-10-22 03:14:06,058 | INFO     | sufficient remaining disk space (373278375936 B)
[2025-10-22 05:14:36] 2025-10-22 03:14:06,058 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 05:14:36] 2025-10-22 03:14:06,058 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 05:14:36] 2025-10-22 03:14:06,058 | INFO     | update_server=False
[2025-10-22 05:14:36] 2025-10-22 03:14:06,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 05:14:36] 2025-10-22 03:14:06,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 05:14:36] 2025-10-22 03:14:06,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 05:14:36] 2025-10-22 03:14:06,111 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-22 05:14:36] 2025-10-22 03:14:06,112 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-22 05:14:36] 2025-10-22 03:14:06,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 05:14:36] 2025-10-22 03:14:06,112 | INFO     | will abort loop
[2025-10-22 05:14:36] 2025-10-22 03:14:06,177 | INFO     | all job control threads have been joined
[2025-10-22 05:14:36] 2025-10-22 03:14:06,386 | INFO     | all data control threads have been joined
[2025-10-22 05:14:36] 2025-10-22 03:14:07,064 | INFO     | [job] retrieve thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:07,064 | INFO     | [job] queue monitor thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:07,106 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:07,117 | INFO     | [job] job monitor thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:07,124 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:07,183 | INFO     | [job] control thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:07,358 | INFO     | all payload control threads have been joined
[2025-10-22 05:14:36] 2025-10-22 03:14:07,391 | INFO     | [data] control thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:07,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:07,996 | INFO     | [payload] failed_post thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:08,060 | INFO     | [data] copytool_out thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:08,100 | INFO     | [data] copytool_in thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:08,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 05:14:36] 2025-10-22 03:14:08,364 | INFO     | [payload] control thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:08,466 | INFO     | [job] validate thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:08,509 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:08,522 | INFO     | [payload] validate_post thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:12,295 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 05:14:36] 2025-10-22 03:14:19,209 | INFO     | [monitor] cgroup control has ended
[2025-10-22 05:14:36] 2025-10-22 03:14:19,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920202381120)>', '<ExcThread(monitor, started 139919473231616)>']
[2025-10-22 05:14:36] 2025-10-22 03:14:24,507 | INFO     | all workflow threads have been joined
[2025-10-22 05:14:36] 2025-10-22 03:14:24,508 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 05:14:36] 2025-10-22 03:14:24,508 | INFO     | traces error code: 0
[2025-10-22 05:14:36] 2025-10-22 03:14:24,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 05:14:36] 2025-10-22 03:14:36,328 | INFO     | PID=1220322 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 05:14:36] 2025-10-22 03:14:36,329 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 05:14:36] 2025-10-22 03:14:36,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 05:14:36] 2025-10-22 03:14:36,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 05:14:36] 2025-10-22 03:14:36,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 05:14:36] 2025-10-22 03:14:36,329 | INFO     | [monitor] control thread has ended
[2025-10-22 05:14:36] 2025-10-22 03:14:36,379 [wrapper] ==== pilot stdout END ====
[2025-10-22 05:14:36] 2025-10-22 03:14:36,382 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 05:14:36] 2025-10-22 03:14:36,385 [wrapper] pilotpid: 1220322
[2025-10-22 05:14:36] 2025-10-22 03:14:36,387 [wrapper] Pilot exit status: 0
[2025-10-22 05:14:36] 2025-10-22 03:14:36,395 [wrapper] pandaids: 6853026712
[2025-10-22 05:14:36] 2025-10-22 03:14:36,412 [wrapper] cleanup supervisor_pilot 1238762 1220323
[2025-10-22 05:14:36] 2025-10-22 03:14:36,415 [wrapper] Test setup, not cleaning
[2025-10-22 05:14:36] 2025-10-22 03:14:36,417 [wrapper] apfmon messages muted
[2025-10-22 05:14:36] 2025-10-22 03:14:36,420 [wrapper] ==== wrapper stdout END ====
[2025-10-22 05:14:36] 2025-10-22 03:14:36,422 [wrapper] ==== wrapper stderr END ====
[2025-10-22 05:14:36]  *** Error codes and diagnostics ***
[2025-10-22 05:14:36]     "exeErrorCode": 0,
[2025-10-22 05:14:36]     "exeErrorDiag": "",
[2025-10-22 05:14:36]     "pilotErrorCode": 0,
[2025-10-22 05:14:36]     "pilotErrorDiag": "",
[2025-10-22 05:14:36]  *** Listing of results directory ***
[2025-10-22 05:14:36] total 427668
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc      5112 Oct 21 12:21 queuedata.json
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc    557409 Oct 21 12:23 pilot3.tar.gz
[2025-10-22 05:14:36] -rwx------ 1 boinc boinc     36292 Oct 21 12:24 runpilot2-wrapper.sh
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc       100 Oct 22 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 05:14:36] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 03:48 run_atlas
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc       105 Oct 22 03:48 job.xml
[2025-10-22 05:14:36] -rw-r--r-- 2 boinc boinc 229017001 Oct 22 03:48 EVNT.46771634._002602.pool.root.1
[2025-10-22 05:14:36] -rw-r--r-- 2 boinc boinc    569688 Oct 22 03:48 input.tar.gz
[2025-10-22 05:14:36] -rw-r--r-- 2 boinc boinc     15120 Oct 22 03:48 start_atlas.sh
[2025-10-22 05:14:36] drwxrwx--x 2 boinc boinc      4096 Oct 22 03:48 shared
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc         0 Oct 22 03:48 boinc_setup_complete
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc      6449 Oct 22 03:48 init_data.xml
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc         0 Oct 22 03:48 boinc_lockfile
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc      2561 Oct 22 03:48 pandaJob.out
[2025-10-22 05:14:36] -rw------- 1 boinc boinc    978432 Oct 22 03:48 agis_schedconf.cvmfs.json
[2025-10-22 05:14:36] -rw------- 1 boinc boinc   1560740 Oct 22 03:48 agis_ddmendpoints.agis.ALL.json
[2025-10-22 05:14:36] drwx------ 5 boinc boinc      4096 Oct 22 03:48 pilot3
[2025-10-22 05:14:36] -rw------- 1 boinc boinc 202990276 Oct 22 05:13 HITS.46771637._065779.pool.root.1
[2025-10-22 05:14:36] -rw------- 1 boinc boinc        95 Oct 22 05:13 pilot_heartbeat.json
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc       529 Oct 22 05:13 boinc_task_state.xml
[2025-10-22 05:14:36] -rw------- 1 boinc boinc      1018 Oct 22 05:13 memory_monitor_summary.json
[2025-10-22 05:14:36] -rw------- 1 boinc boinc    261076 Oct 22 05:13 log.46771637._065779.job.log.tgz.1
[2025-10-22 05:14:36] -rw------- 1 boinc boinc      7757 Oct 22 05:14 heartbeat.json
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc      8192 Oct 22 05:14 boinc_mmap_file
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc        27 Oct 22 05:14 wrapper_checkpoint.txt
[2025-10-22 05:14:36] -rw------- 1 boinc boinc       747 Oct 22 05:14 pilotlog.txt
[2025-10-22 05:14:36] -rw------- 1 boinc boinc    754848 Oct 22 05:14 log.46771637._065779.job.log.1
[2025-10-22 05:14:36] -rw------- 1 boinc boinc       357 Oct 22 05:14 output.list
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc       620 Oct 22 05:14 runtime_log
[2025-10-22 05:14:36] -rw------- 1 boinc boinc   1034240 Oct 22 05:14 result.tar.gz
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc      8792 Oct 22 05:14 runtime_log.err
[2025-10-22 05:14:36] -rw------- 1 boinc boinc       661 Oct 22 05:14 GSoLDm8iOV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaG2NDmlfgAfn.diag
[2025-10-22 05:14:36] -rw-r--r-- 1 boinc boinc      9116 Oct 22 05:14 stderr.txt
[2025-10-22 05:14:36] HITS file was successfully produced:
[2025-10-22 05:14:36] -rw------- 1 boinc boinc 202990276 Oct 22 05:13 shared/HITS.pool.root.1
[2025-10-22 05:14:36]  *** Contents of shared directory: ***
[2025-10-22 05:14:36] total 423484
[2025-10-22 05:14:36] -rw-r--r-- 2 boinc boinc 229017001 Oct 22 03:48 ATLAS.root_0
[2025-10-22 05:14:36] -rw-r--r-- 2 boinc boinc    569688 Oct 22 03:48 input.tar.gz
[2025-10-22 05:14:36] -rw-r--r-- 2 boinc boinc     15120 Oct 22 03:48 start_atlas.sh
[2025-10-22 05:14:36] -rw------- 1 boinc boinc 202990276 Oct 22 05:13 HITS.pool.root.1
[2025-10-22 05:14:36] -rw------- 1 boinc boinc   1034240 Oct 22 05:14 result.tar.gz
05:14:37 (1216600): run_atlas exited; CPU time 14803.736147
05:14:37 (1216600): called boinc_finish(0)

</stderr_txt>
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