Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:36:07 (3741074): wrapper (7.7.26015): starting
10:36:07 (3741074): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 10:36:07] Arguments: --nthreads 8
[2025-10-21 10:36:07] Threads: 8
[2025-10-21 10:36:07] Checking for CVMFS
[2025-10-21 10:36:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 10:36:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 10:36:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 10:36:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 10:36:08] 2.13.2.0 704839 138090 191732 151961 1 297 25729799 40960001 24147 16776704 1 361060611 99.703 272692392 35204 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-21 10:36:08] CVMFS is ok
[2025-10-21 10:36:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 10:36:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 10:36:08] Further information can be found at the LHC@home message board.
[2025-10-21 10:36:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 10:36:08] Checking for apptainer binary...
[2025-10-21 10:36:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 10:36:08] Running /usr/bin/apptainer --version
[2025-10-21 10:36:08] apptainer version 1.4.3-1.el9
[2025-10-21 10:36:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 10:36:08] c-212-4.aglt2.org
[2025-10-21 10:36:08] apptainer works
[2025-10-21 10:36:08] Set ATHENA_PROC_NUMBER=8
[2025-10-21 10:36:08] Set ATHENA_CORE_NUMBER=8
[2025-10-21 10:36:08] Starting ATLAS job with PandaID=6852988666
[2025-10-21 10:36:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 15:08:42]  *** The last 200 lines of the pilot log: ***
[2025-10-21 15:08:42] 2025-10-21 19:08:00,093 | INFO     | -- intersect: -22745253220.221184
[2025-10-21 15:08:42] 2025-10-21 19:08:00,093 | INFO     | intersect: -22745253220.221184
[2025-10-21 15:08:42] 2025-10-21 19:08:00,093 | INFO     | chi2: 0.49856525680414027
[2025-10-21 15:08:42] 2025-10-21 19:08:00,093 | INFO     | current chi2=0.49856525680414027 (change=85.06446311127202 %)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,093 | INFO     | sum of square deviations: 5141525365.701988
[2025-10-21 15:08:42] 2025-10-21 19:08:00,095 | INFO     | sum of deviations: 46177068432.486275
[2025-10-21 15:08:42] 2025-10-21 19:08:00,095 | INFO     | mean x: 1761065886.2196078
[2025-10-21 15:08:42] 2025-10-21 19:08:00,095 | INFO     | mean y: 2490586.062745098
[2025-10-21 15:08:42] 2025-10-21 19:08:00,095 | INFO     | -- intersect: -15813994631.447588
[2025-10-21 15:08:42] 2025-10-21 19:08:00,096 | INFO     | intersect: -15813994631.447588
[2025-10-21 15:08:42] 2025-10-21 19:08:00,096 | INFO     | chi2: 0.2227265441616685
[2025-10-21 15:08:42] 2025-10-21 19:08:00,096 | INFO     | current chi2=0.2227265441616685 (change=55.326501170705136 %)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,096 | INFO     | sum of square deviations: 4844969686.4000225
[2025-10-21 15:08:42] 2025-10-21 19:08:00,098 | INFO     | sum of deviations: 28997685783.159977
[2025-10-21 15:08:42] 2025-10-21 19:08:00,098 | INFO     | mean x: 1761066038.72
[2025-10-21 15:08:42] 2025-10-21 19:08:00,098 | INFO     | mean y: 2499411.688
[2025-10-21 15:08:42] 2025-10-21 19:08:00,098 | INFO     | -- intersect: -10537677914.404045
[2025-10-21 15:08:42] 2025-10-21 19:08:00,098 | INFO     | intersect: -10537677914.404045
[2025-10-21 15:08:42] 2025-10-21 19:08:00,099 | INFO     | chi2: 0.08675965280801565
[2025-10-21 15:08:42] 2025-10-21 19:08:00,099 | INFO     | current chi2=0.08675965280801565 (change=61.04655907333605 %)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,099 | INFO     | sum of square deviations: 4560042132.097942
[2025-10-21 15:08:42] 2025-10-21 19:08:00,101 | INFO     | sum of deviations: 16897887102.869383
[2025-10-21 15:08:42] 2025-10-21 19:08:00,101 | INFO     | mean x: 1761066191.2204082
[2025-10-21 15:08:42] 2025-10-21 19:08:00,101 | INFO     | mean y: 2505887.706122449
[2025-10-21 15:08:42] 2025-10-21 19:08:00,101 | INFO     | -- intersect: -6523376290.104309
[2025-10-21 15:08:42] 2025-10-21 19:08:00,101 | INFO     | intersect: -6523376290.104309
[2025-10-21 15:08:42] 2025-10-21 19:08:00,101 | INFO     | chi2: 0.0197883147851517
[2025-10-21 15:08:42] 2025-10-21 19:08:00,101 | INFO     | current chi2=0.0197883147851517 (change=77.19180039950152 %)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,102 | INFO     | sum of square deviations: 4286510018.295854
[2025-10-21 15:08:42] 2025-10-21 19:08:00,103 | INFO     | sum of deviations: 13402428756.129168
[2025-10-21 15:08:42] 2025-10-21 19:08:00,103 | INFO     | mean x: 1761066343.7208333
[2025-10-21 15:08:42] 2025-10-21 19:08:00,103 | INFO     | mean y: 2507816.5541666667
[2025-10-21 15:08:42] 2025-10-21 19:08:00,104 | INFO     | -- intersect: -5503735282.329058
[2025-10-21 15:08:42] 2025-10-21 19:08:00,104 | INFO     | intersect: -5503735282.329058
[2025-10-21 15:08:42] 2025-10-21 19:08:00,104 | INFO     | chi2: 0.005749301334532834
[2025-10-21 15:08:42] 2025-10-21 19:08:00,104 | INFO     | current chi2=0.005749301334532834 (change=70.94597798268873 %)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,104 | INFO     | sum of square deviations: 4024126143.046828
[2025-10-21 15:08:42] 2025-10-21 19:08:00,106 | INFO     | sum of deviations: 12961730071.646812
[2025-10-21 15:08:42] 2025-10-21 19:08:00,106 | INFO     | mean x: 1761066496.2255318
[2025-10-21 15:08:42] 2025-10-21 19:08:00,106 | INFO     | mean y: 2508071.025531915
[2025-10-21 15:08:42] 2025-10-21 19:08:00,106 | INFO     | -- intersect: -5669895762.968928
[2025-10-21 15:08:42] 2025-10-21 19:08:00,106 | INFO     | intersect: -5669895762.968928
[2025-10-21 15:08:42] 2025-10-21 19:08:00,107 | INFO     | chi2: 0.005617682594415255
[2025-10-21 15:08:42] 2025-10-21 19:08:00,107 | INFO     | current chi2=0.005617682594415255 (change=2.2892997332914025 %)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,107 | INFO     | left removable region: 60
[2025-10-21 15:08:42] 2025-10-21 19:08:00,107 | INFO     | sum of square deviations: 2443492920.41207
[2025-10-21 15:08:42] 2025-10-21 19:08:00,108 | INFO     | sum of deviations: 4228037378.658293
[2025-10-21 15:08:42] 2025-10-21 19:08:00,108 | INFO     | mean x: 1761067228.2613065
[2025-10-21 15:08:42] 2025-10-21 19:08:00,108 | INFO     | mean y: 2513492.929648241
[2025-10-21 15:08:42] 2025-10-21 19:08:00,109 | INFO     | -- intersect: -3044705512.789138
[2025-10-21 15:08:42] 2025-10-21 19:08:00,109 | INFO     | intersect: -3044705512.789138
[2025-10-21 15:08:42] 2025-10-21 19:08:00,109 | INFO     | chi2: 0.00045528613650341735
[2025-10-21 15:08:42] 2025-10-21 19:08:00,109 | INFO     | -- intersect: -3044705512.789138
[2025-10-21 15:08:42] 2025-10-21 19:08:00,109 | INFO     | current memory leak: 1.73 B/s (using 199 data points, chi2=0.00)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,110 | INFO     | could have reported an average CPU frequency of 2956 MHz (12 samples)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,110 | INFO     | ..............................
[2025-10-21 15:08:42] 2025-10-21 19:08:00,110 | INFO     | . Timing measurements:
[2025-10-21 15:08:42] 2025-10-21 19:08:00,110 | INFO     | . get job = 0 s
[2025-10-21 15:08:42] 2025-10-21 19:08:00,110 | INFO     | . initial setup = 6 s
[2025-10-21 15:08:42] 2025-10-21 19:08:00,110 | INFO     | . payload setup = 41 s
[2025-10-21 15:08:42] 2025-10-21 19:08:00,110 | INFO     | . stage-in = 0 s
[2025-10-21 15:08:42] 2025-10-21 19:08:00,110 | INFO     | . payload execution = 16154 s
[2025-10-21 15:08:42] 2025-10-21 19:08:00,110 | INFO     | . stage-out = 2 s
[2025-10-21 15:08:42] 2025-10-21 19:08:00,111 | INFO     | . log creation = 0 s
[2025-10-21 15:08:42] 2025-10-21 19:08:00,111 | INFO     | ..............................
[2025-10-21 15:08:42] 2025-10-21 19:08:00,202 | INFO     | 
[2025-10-21 15:08:42] 2025-10-21 19:08:00,204 | INFO     | job summary report
[2025-10-21 15:08:42] 2025-10-21 19:08:00,204 | INFO     | --------------------------------------------------
[2025-10-21 15:08:42] 2025-10-21 19:08:00,204 | INFO     | PanDA job id: 6852988666
[2025-10-21 15:08:42] 2025-10-21 19:08:00,204 | INFO     | task id: 46771637
[2025-10-21 15:08:42] 2025-10-21 19:08:00,204 | INFO     | errors: (none)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 15:08:42] 2025-10-21 19:08:00,204 | INFO     | pilot state: finished 
[2025-10-21 15:08:42] 2025-10-21 19:08:00,204 | INFO     | transexitcode: 0
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | exeerrorcode: 0
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | exeerrordiag: 
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | exitcode: 0
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | exitmsg: OK
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | cpuconsumptiontime: 42277 s
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | nevents: 400
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | neventsw: 0
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | pid: 3755181
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | pgrp: 3755181
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | corecount: 8
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | event service: False
[2025-10-21 15:08:42] 2025-10-21 19:08:00,205 | INFO     | sizes: {0: 2348103, 1: 2348788, 2: 2348987, 12: 2348987, 20: 2349277, 23: 2349305, 16198: 2381212, 16201: 2390210, 16204: 2390266, 16209: 2390460}
[2025-10-21 15:08:42] 2025-10-21 19:08:00,206 | INFO     | --------------------------------------------------
[2025-10-21 15:08:42] 2025-10-21 19:08:00,206 | INFO     | 
[2025-10-21 15:08:42] 2025-10-21 19:08:00,206 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-21 15:08:42] 2025-10-21 19:08:00,246 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,246 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,246 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,246 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,246 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 15:08:42] 2025-10-21 19:08:00,248 | INFO     | job 6852988666 has completed (purged errors)
[2025-10-21 15:08:42] 2025-10-21 19:08:00,248 | INFO     | overall cleanup function is called
[2025-10-21 15:08:42] 2025-10-21 19:08:01,257 | INFO     | --- collectZombieJob: --- 10, [3755181]
[2025-10-21 15:08:42] 2025-10-21 19:08:01,257 | INFO     | zombie collector waiting for pid 3755181
[2025-10-21 15:08:42] 2025-10-21 19:08:01,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 15:08:42] 2025-10-21 19:08:01,257 | INFO     | collected zombie processes
[2025-10-21 15:08:42] 2025-10-21 19:08:01,257 | INFO     | will attempt to kill all subprocesses of pid=3755181
[2025-10-21 15:08:42] 2025-10-21 19:08:01,768 | INFO     | process IDs to be killed: [3755181] (in reverse order)
[2025-10-21 15:08:42] 2025-10-21 19:08:01,924 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 15:08:42] 2025-10-21 19:08:01,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 15:08:42] 2025-10-21 19:08:01,948 | INFO     | did not find any defunct processes belonging to 3755181
[2025-10-21 15:08:42] 2025-10-21 19:08:01,968 | INFO     | did not find any defunct processes belonging to 3755181
[2025-10-21 15:08:42] 2025-10-21 19:08:01,968 | INFO     | ready for new job
[2025-10-21 15:08:42] 2025-10-21 19:08:01,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 15:08:42] 2025-10-21 19:08:01,972 | INFO     | ***************************************
[2025-10-21 15:08:42] 2025-10-21 19:08:01,972 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 15:08:42] 2025-10-21 19:08:01,972 | INFO     | ***************************************
[2025-10-21 15:08:42] 2025-10-21 19:08:01,972 | INFO     | 
[2025-10-21 15:08:42] 2025-10-21 19:08:01,978 | INFO     | architecture information:
[2025-10-21 15:08:42] 2025-10-21 19:08:01,979 | INFO     | executing command: cat /etc/os-release
[2025-10-21 15:08:42] 2025-10-21 19:08:01,996 | INFO     | cat /etc/os-release:
[2025-10-21 15:08:42] NAME="CentOS Linux"
[2025-10-21 15:08:42] VERSION="7 (Core)"
[2025-10-21 15:08:42] ID="centos"
[2025-10-21 15:08:42] ID_LIKE="rhel fedora"
[2025-10-21 15:08:42] VERSION_ID="7"
[2025-10-21 15:08:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 15:08:42] ANSI_COLOR="0;31"
[2025-10-21 15:08:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 15:08:42] HOME_URL="https://www.centos.org/"
[2025-10-21 15:08:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 15:08:42] 
[2025-10-21 15:08:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 15:08:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 15:08:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 15:08:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 15:08:42] 
[2025-10-21 15:08:42] 2025-10-21 19:08:01,997 | INFO     | ***************************************
[2025-10-21 15:08:42] 2025-10-21 19:08:02,502 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-21 15:08:42] 2025-10-21 19:08:02,530 | INFO     | sufficient remaining disk space (127400935424 B)
[2025-10-21 15:08:42] 2025-10-21 19:08:02,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 15:08:42] 2025-10-21 19:08:02,530 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 15:08:42] 2025-10-21 19:08:02,531 | INFO     | update_server=False
[2025-10-21 15:08:42] 2025-10-21 19:08:02,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 15:08:42] 2025-10-21 19:08:02,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 15:08:42] 2025-10-21 19:08:02,536 | INFO     | aborting loop
[2025-10-21 15:08:42] 2025-10-21 19:08:02,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 15:08:42] 2025-10-21 19:08:03,210 | INFO     | all data control threads have been joined
[2025-10-21 15:08:42] 2025-10-21 19:08:03,365 | INFO     | all job control threads have been joined
[2025-10-21 15:08:42] 2025-10-21 19:08:03,540 | INFO     | [job] retrieve thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:03,541 | INFO     | [job] job monitor thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:03,620 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:03,771 | INFO     | [payload] failed_post thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:03,844 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:03,892 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:03,963 | INFO     | all payload control threads have been joined
[2025-10-21 15:08:42] 2025-10-21 19:08:04,002 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:04,075 | INFO     | [data] copytool_in thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:04,215 | INFO     | [data] control thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:04,372 | INFO     | [job] control thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:04,388 | INFO     | [job] validate thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:04,698 | INFO     | [data] copytool_out thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:04,874 | INFO     | [payload] validate_post thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:04,969 | INFO     | [payload] control thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:05,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 15:08:42] 2025-10-21 19:08:05,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 15:08:42] 2025-10-21 19:08:06,221 | INFO     | [job] queue monitor thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:09,353 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 15:08:42] 2025-10-21 19:08:33,321 | INFO     | PID=3746819 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 15:08:42] 2025-10-21 19:08:33,321 | INFO     | .. there are 22 such processes running
[2025-10-21 15:08:42] 2025-10-21 19:08:33,321 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 15:08:42] 2025-10-21 19:08:33,321 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 15:08:42] 2025-10-21 19:08:33,321 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 15:08:42] 2025-10-21 19:08:35,254 | INFO     | [monitor] cgroup control has ended
[2025-10-21 15:08:42] 2025-10-21 19:08:36,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903197124416)>', '<ExcThread(monitor, started 139902553405184)>']
[2025-10-21 15:08:42] 2025-10-21 19:08:37,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 15:08:42] 2025-10-21 19:08:37,346 | INFO     | [monitor] control thread has ended
[2025-10-21 15:08:42] 2025-10-21 19:08:41,683 | INFO     | all workflow threads have been joined
[2025-10-21 15:08:42] 2025-10-21 19:08:41,683 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 15:08:42] 2025-10-21 19:08:41,683 | INFO     | traces error code: 0
[2025-10-21 15:08:42] 2025-10-21 19:08:41,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 15:08:42] 2025-10-21 19:08:41,814 [wrapper] ==== pilot stdout END ====
[2025-10-21 15:08:42] 2025-10-21 19:08:41,817 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 15:08:42] 2025-10-21 19:08:41,819 [wrapper] pilotpid: 3746819
[2025-10-21 15:08:42] 2025-10-21 19:08:41,821 [wrapper] Pilot exit status: 0
[2025-10-21 15:08:42] 2025-10-21 19:08:41,834 [wrapper] pandaids: 6852988666
[2025-10-21 15:08:42] 2025-10-21 19:08:41,933 [wrapper] cleanup supervisor_pilot  477339 3746820
[2025-10-21 15:08:42] 2025-10-21 19:08:41,936 [wrapper] Test setup, not cleaning
[2025-10-21 15:08:42] 2025-10-21 19:08:41,939 [wrapper] apfmon messages muted
[2025-10-21 15:08:42] 2025-10-21 19:08:41,942 [wrapper] ==== wrapper stdout END ====
[2025-10-21 15:08:42] 2025-10-21 19:08:41,945 [wrapper] ==== wrapper stderr END ====
[2025-10-21 15:08:42]  *** Error codes and diagnostics ***
[2025-10-21 15:08:42]     "exeErrorCode": 0,
[2025-10-21 15:08:42]     "exeErrorDiag": "",
[2025-10-21 15:08:42]     "pilotErrorCode": 0,
[2025-10-21 15:08:42]     "pilotErrorDiag": "",
[2025-10-21 15:08:42]  *** Listing of results directory ***
[2025-10-21 15:08:42] total 437824
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 21 02:00 pilot3.tar.gz
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 21 02:08 queuedata.json
[2025-10-21 15:08:42] -rwx------. 1 boincer umatlas     36292 Oct 21 02:11 runpilot2-wrapper.sh
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas       100 Oct 21 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 15:08:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 10:36 run_atlas
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas       105 Oct 21 10:36 job.xml
[2025-10-21 15:08:42] -rw-r--r--. 2 boincer umatlas 229184396 Oct 21 10:36 EVNT.46771634._002479.pool.root.1
[2025-10-21 15:08:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 10:36 start_atlas.sh
[2025-10-21 15:08:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 10:36 shared
[2025-10-21 15:08:42] -rw-r--r--. 2 boincer umatlas    569676 Oct 21 10:36 input.tar.gz
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas         0 Oct 21 10:36 boinc_lockfile
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas      2560 Oct 21 10:36 pandaJob.out
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas    978836 Oct 21 10:37 agis_schedconf.cvmfs.json
[2025-10-21 15:08:42] drwx------. 5 boincer umatlas      4096 Oct 21 10:37 pilot3
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas      6947 Oct 21 15:03 init_data.xml
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas 210014439 Oct 21 15:07 HITS.46771637._062821.pool.root.1
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas       531 Oct 21 15:07 boinc_task_state.xml
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas      1061 Oct 21 15:07 memory_monitor_summary.json
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas   1560740 Oct 21 15:07 agis_ddmendpoints.agis.ALL.json
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas    485841 Oct 21 15:07 log.46771637._062821.job.log.tgz.1
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas        95 Oct 21 15:07 pilot_heartbeat.json
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas      7803 Oct 21 15:08 heartbeat.json
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas        28 Oct 21 15:08 wrapper_checkpoint.txt
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 15:08 boinc_mmap_file
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas      4825 Oct 21 15:08 pilotlog.txt
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas   2125843 Oct 21 15:08 log.46771637._062821.job.log.1
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas       357 Oct 21 15:08 output.list
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas       620 Oct 21 15:08 runtime_log
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas   2631680 Oct 21 15:08 result.tar.gz
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas       659 Oct 21 15:08 v5lMDmzlKV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmu1eMDmpLnBDn.diag
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas      8699 Oct 21 15:08 runtime_log.err
[2025-10-21 15:08:42] -rw-r--r--. 1 boincer umatlas     21057 Oct 21 15:08 stderr.txt
[2025-10-21 15:08:42] HITS file was successfully produced:
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas 210014439 Oct 21 15:07 shared/HITS.pool.root.1
[2025-10-21 15:08:42]  *** Contents of shared directory: ***
[2025-10-21 15:08:42] total 432064
[2025-10-21 15:08:42] -rw-r--r--. 2 boincer umatlas 229184396 Oct 21 10:36 ATLAS.root_0
[2025-10-21 15:08:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 10:36 start_atlas.sh
[2025-10-21 15:08:42] -rw-r--r--. 2 boincer umatlas    569676 Oct 21 10:36 input.tar.gz
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas 210014439 Oct 21 15:07 HITS.pool.root.1
[2025-10-21 15:08:42] -rw-------. 1 boincer umatlas   2631680 Oct 21 15:08 result.tar.gz
15:08:43 (3741074): run_atlas exited; CPU time 42818.572042
15:08:43 (3741074): called boinc_finish(0)

</stderr_txt>
]]>

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