Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:44:17 (4052001): wrapper (7.7.26015): starting
06:44:17 (4052001): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 06:44:17] Arguments: --nthreads 8
[2025-10-21 06:44:17] Threads: 8
[2025-10-21 06:44:17] Checking for CVMFS
[2025-10-21 06:44:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 06:44:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 06:44:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 06:44:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 06:44:17] 2.11.3.0 2062 44162 204420 151959 1 194 28768946 45568001 7434 130560 0 327757929 99.881 130262450 25969 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-21 06:44:17] CVMFS is ok
[2025-10-21 06:44:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 06:44:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 06:44:17] Further information can be found at the LHC@home message board.
[2025-10-21 06:44:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 06:44:17] Checking for apptainer binary...
[2025-10-21 06:44:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 06:44:17] Running /usr/bin/apptainer --version
[2025-10-21 06:44:17] apptainer version 1.4.1-1.el9
[2025-10-21 06:44:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 06:44:17] wns0024.triumf.lcg
[2025-10-21 06:44:17] apptainer works
[2025-10-21 06:44:17] Set ATHENA_PROC_NUMBER=8
[2025-10-21 06:44:17] Set ATHENA_CORE_NUMBER=8
[2025-10-21 06:44:17] Starting ATLAS job with PandaID=6853054943
[2025-10-21 06:44:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 06:47:36]  *** The last 200 lines of the pilot log: ***
[2025-10-21 06:47:36] 2025-10-21 13:47:04,345 | WARNING  | found no stored workdir sizes
[2025-10-21 06:47:36] 2025-10-21 13:47:04,345 | INFO     | will not add max space = 0 B to job metrics
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | WARNING  | wrong length of table data, x=[1761054290.0], y=[1037.0] (must be same and length>=4)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | ..............................
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . Timing measurements:
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . get job = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . initial setup = 2 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . payload setup = 4 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . stage-in = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | . payload execution = 16 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | . stage-out = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | . log creation = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | ..............................
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853054943/pilotlog.txt
[2025-10-21 06:47:36] 2025-10-21 13:47:04,358 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-21 06:47:36] - Log from pilotlog.txt -
[2025-10-21 06:47:36] 2025-10-21 13:47:04,344 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 06:47:36] 2025-10-21 13:47:04,344 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 06:47:36] 2025-10-21 13:47:04,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 06:47:36] 2025-10-21 13:47:04,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 06:47:36] 2025-10-21 13:47:04,345 | WARNING  | found no stored workdir sizes
[2025-10-21 06:47:36] 2025-10-21 13:47:04,345 | INFO     | will not add max space = 0 B to job metrics
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | WARNING  | wrong length of table data, x=[1761054290.0], y=[1037.0] (must be same and length>=4)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | ..............................
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . Timing measurements:
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . get job = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . initial setup = 2 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . payload setup = 4 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . stage-in = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | . payload execution = 16 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | . stage-out = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | . log creation = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | ..............................
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853054943/pilotlog.txt
[2025-10-21 06:47:36] 2025-10-21 13:47:04,358 | WARNING  | 
[2025-10-21 06:47:36] [begin log extracts]
[2025-10-21 06:47:36] - Log from pilotlog.txt -
[2025-10-21 06:47:36] 2025-10-21 13:47:04,344 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 06:47:36] 2025-10-21 13:47:04,344 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 06:47:36] 2025-10-21 13:47:04,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 06:47:36] 2025-10-21 13:47:04,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 06:47:36] 2025-10-21 13:47:04,345 | WARNING  | found no stored workdir sizes
[2025-10-21 06:47:36] 2025-10-21 13:47:04,345 | INFO     | will not add max space = 0 B to job metrics
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | WARNING  | wrong length of table data, x=[1761054290.0], y=[1037.0] (must be same and length>=4)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | ..............................
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . Timing measurements:
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . get job = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . initial setup = 2 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . payload setup = 4 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,346 | INFO     | . stage-in = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | . payload execution = 16 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | . stage-out = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | . log creation = 0 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | ..............................
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-21 06:47:36] 2025-10-21 13:47:04,347 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6853054943/pilotlog.txt
[2025-10-21 06:47:36] [end log extracts]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,358 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,359 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-21 06:47:36] 2025-10-21 13:47:04,434 | INFO     | 
[2025-10-21 06:47:36] 2025-10-21 13:47:04,434 | INFO     | job summary report
[2025-10-21 06:47:36] 2025-10-21 13:47:04,434 | INFO     | --------------------------------------------------
[2025-10-21 06:47:36] 2025-10-21 13:47:04,434 | INFO     | PanDA job id: 6853054943
[2025-10-21 06:47:36] 2025-10-21 13:47:04,434 | INFO     | task id: 46771637
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-21 06:44:57,696 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | pilot state: failed 
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | transexitcode: 65
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | exeerrorcode: 65
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | exitcode: 65
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | cpuconsumptiontime: 18 s
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | nevents: 0
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | neventsw: 0
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | pid: 4062165
[2025-10-21 06:47:36] 2025-10-21 13:47:04,435 | INFO     | pgrp: 4062165
[2025-10-21 06:47:36] 2025-10-21 13:47:04,436 | INFO     | corecount: 8
[2025-10-21 06:47:36] 2025-10-21 13:47:04,436 | INFO     | event service: False
[2025-10-21 06:47:36] 2025-10-21 13:47:04,436 | INFO     | sizes: {0: 2348755, 1: 2348954, 4: 2349216, 11: 2349244, 24: 2376709, 143: 2376847}
[2025-10-21 06:47:36] 2025-10-21 13:47:04,436 | INFO     | --------------------------------------------------
[2025-10-21 06:47:36] 2025-10-21 13:47:04,436 | INFO     | 
[2025-10-21 06:47:36] 2025-10-21 13:47:04,436 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-21 06:47:36] 2025-10-21 13:47:04,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,453 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 06:47:36] 2025-10-21 13:47:04,453 | INFO     | job 6853054943 has completed (purged errors)
[2025-10-21 06:47:36] 2025-10-21 13:47:04,453 | INFO     | overall cleanup function is called
[2025-10-21 06:47:36] 2025-10-21 13:47:05,459 | INFO     | --- collectZombieJob: --- 10, [4062165]
[2025-10-21 06:47:36] 2025-10-21 13:47:05,460 | INFO     | zombie collector waiting for pid 4062165
[2025-10-21 06:47:36] 2025-10-21 13:47:05,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 06:47:36] 2025-10-21 13:47:05,460 | INFO     | collected zombie processes
[2025-10-21 06:47:36] 2025-10-21 13:47:05,460 | INFO     | will attempt to kill all subprocesses of pid=4062165
[2025-10-21 06:47:36] 2025-10-21 13:47:05,614 | INFO     | process IDs to be killed: [4062165] (in reverse order)
[2025-10-21 06:47:36] 2025-10-21 13:47:05,659 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 06:47:36] 2025-10-21 13:47:05,660 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 06:47:36] 2025-10-21 13:47:05,664 | INFO     | did not find any defunct processes belonging to 4062165
[2025-10-21 06:47:36] 2025-10-21 13:47:05,667 | INFO     | did not find any defunct processes belonging to 4062165
[2025-10-21 06:47:36] 2025-10-21 13:47:05,668 | INFO     | ready for new job
[2025-10-21 06:47:36] 2025-10-21 13:47:05,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 06:47:36] 2025-10-21 13:47:05,669 | INFO     | ***************************************
[2025-10-21 06:47:36] 2025-10-21 13:47:05,669 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 06:47:36] 2025-10-21 13:47:05,669 | INFO     | ***************************************
[2025-10-21 06:47:36] 2025-10-21 13:47:05,669 | INFO     | 
[2025-10-21 06:47:36] 2025-10-21 13:47:05,670 | INFO     | architecture information:
[2025-10-21 06:47:36] 2025-10-21 13:47:05,671 | INFO     | executing command: cat /etc/os-release
[2025-10-21 06:47:36] 2025-10-21 13:47:05,680 | INFO     | cat /etc/os-release:
[2025-10-21 06:47:36] NAME="CentOS Linux"
[2025-10-21 06:47:36] VERSION="7 (Core)"
[2025-10-21 06:47:36] ID="centos"
[2025-10-21 06:47:36] ID_LIKE="rhel fedora"
[2025-10-21 06:47:36] VERSION_ID="7"
[2025-10-21 06:47:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 06:47:36] ANSI_COLOR="0;31"
[2025-10-21 06:47:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 06:47:36] HOME_URL="https://www.centos.org/"
[2025-10-21 06:47:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 06:47:36] 
[2025-10-21 06:47:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 06:47:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 06:47:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 06:47:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 06:47:36] 
[2025-10-21 06:47:36] 2025-10-21 13:47:05,680 | INFO     | ***************************************
[2025-10-21 06:47:36] 2025-10-21 13:47:06,183 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-21 06:47:36] 2025-10-21 13:47:06,197 | INFO     | sufficient remaining disk space (1390145437696 B)
[2025-10-21 06:47:36] 2025-10-21 13:47:06,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 06:47:36] 2025-10-21 13:47:06,197 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 06:47:36] 2025-10-21 13:47:06,197 | INFO     | update_server=False
[2025-10-21 06:47:36] 2025-10-21 13:47:06,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 06:47:36] 2025-10-21 13:47:06,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 06:47:36] 2025-10-21 13:47:06,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 06:47:36] 2025-10-21 13:47:06,372 | INFO     | all job control threads have been joined
[2025-10-21 06:47:36] 2025-10-21 13:47:06,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 06:47:36] 2025-10-21 13:47:06,963 | INFO     | aborting loop
[2025-10-21 06:47:36] 2025-10-21 13:47:07,054 | INFO     | all payload control threads have been joined
[2025-10-21 06:47:36] 2025-10-21 13:47:07,194 | INFO     | all data control threads have been joined
[2025-10-21 06:47:36] 2025-10-21 13:47:07,203 | INFO     | [job] retrieve thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:07,203 | INFO     | [job] queue monitor thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:07,248 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:07,374 | INFO     | [job] control thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:07,499 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:07,719 | INFO     | [payload] failed_post thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:07,791 | INFO     | [data] copytool_in thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:07,968 | INFO     | [job] job monitor thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:08,059 | INFO     | [payload] control thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:08,199 | INFO     | [data] control thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:08,203 | INFO     | [data] copytool_out thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:08,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 06:47:36] 2025-10-21 13:47:08,367 | INFO     | [job] validate thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:08,581 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:08,700 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:08,761 | INFO     | [payload] validate_post thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:12,362 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 06:47:36] 2025-10-21 13:47:26,126 | INFO     | [monitor] cgroup control has ended
[2025-10-21 06:47:36] 2025-10-21 13:47:27,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140305312302912)>', '<ExcThread(monitor, started 140304485177088)>']
[2025-10-21 06:47:36] 2025-10-21 13:47:32,806 | INFO     | all workflow threads have been joined
[2025-10-21 06:47:36] 2025-10-21 13:47:32,806 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 06:47:36] 2025-10-21 13:47:32,807 | INFO     | traces error code: 0
[2025-10-21 06:47:36] 2025-10-21 13:47:32,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 06:47:36] 2025-10-21 13:47:35,884 | INFO     | PID=4055648 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 06:47:36] 2025-10-21 13:47:35,885 | INFO     | .. there are 12 such processes running
[2025-10-21 06:47:36] 2025-10-21 13:47:35,885 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 06:47:36] 2025-10-21 13:47:35,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 06:47:36] 2025-10-21 13:47:35,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 06:47:36] 2025-10-21 13:47:35,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 06:47:36] 2025-10-21 13:47:35,886 | CRITICAL | thread 'MainThread' is not alive
[2025-10-21 06:47:36] 2025-10-21 13:47:35,886 | INFO     | [monitor] control thread has ended
[2025-10-21 06:47:36] 2025-10-21 13:47:35,996 [wrapper] ==== pilot stdout END ====
[2025-10-21 06:47:36] 2025-10-21 13:47:35,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 06:47:36] 2025-10-21 13:47:36,000 [wrapper] pilotpid: 4055648
[2025-10-21 06:47:36] 2025-10-21 13:47:36,002 [wrapper] Pilot exit status: 0
[2025-10-21 06:47:36] 2025-10-21 13:47:36,010 [wrapper] pandaids: 6853054943
[2025-10-21 06:47:36] 2025-10-21 13:47:36,039 [wrapper] cleanup supervisor_pilot 4055654 4055649
[2025-10-21 06:47:36] 2025-10-21 13:47:36,041 [wrapper] Test setup, not cleaning
[2025-10-21 06:47:36] 2025-10-21 13:47:36,043 [wrapper] apfmon messages muted
[2025-10-21 06:47:36] 2025-10-21 13:47:36,046 [wrapper] ==== wrapper stdout END ====
[2025-10-21 06:47:36] 2025-10-21 13:47:36,048 [wrapper] ==== wrapper stderr END ====
[2025-10-21 06:47:36]  *** Error codes and diagnostics ***
[2025-10-21 06:47:36]     "exeErrorCode": 65,
[2025-10-21 06:47:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-21 06:47:36]     "pilotErrorCode": 1305,
[2025-10-21 06:47:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-21 06:47:36]  *** Listing of results directory ***
[2025-10-21 06:47:36] total 225828
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc      5112 Oct 21 04:23 queuedata.json
[2025-10-21 06:47:36] -rwx------. 1 boinc boinc     36292 Oct 21 04:23 runpilot2-wrapper.sh
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc    557409 Oct 21 04:23 pilot3.tar.gz
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc       100 Oct 21 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 06:47:36] -rwxr-xr-x. 1 boinc boinc      7986 Oct 21 06:44 run_atlas
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc       105 Oct 21 06:44 job.xml
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc      6444 Oct 21 06:44 init_data.xml
[2025-10-21 06:47:36] -rw-r--r--. 2 boinc boinc 227144684 Oct 21 06:44 EVNT.46771634._002632.pool.root.1
[2025-10-21 06:47:36] -rw-r--r--. 2 boinc boinc     15120 Oct 21 06:44 start_atlas.sh
[2025-10-21 06:47:36] drwxrwx--x. 2 boinc boinc      4096 Oct 21 06:44 shared
[2025-10-21 06:47:36] -rw-r--r--. 2 boinc boinc    569674 Oct 21 06:44 input.tar.gz
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc         0 Oct 21 06:44 boinc_lockfile
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc      2559 Oct 21 06:44 pandaJob.out
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc    978846 Oct 21 06:44 agis_schedconf.cvmfs.json
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc   1560740 Oct 21 06:44 agis_ddmendpoints.agis.ALL.json
[2025-10-21 06:47:36] drwx------. 5 boinc boinc      4096 Oct 21 06:44 pilot3
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc       523 Oct 21 06:45 boinc_task_state.xml
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc       961 Oct 21 06:45 memory_monitor_summary.json
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc     20973 Oct 21 06:45 log.46771637._066489.job.log.tgz.1
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc      8367 Oct 21 06:47 heartbeat.json
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc        22 Oct 21 06:47 wrapper_checkpoint.txt
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc      8192 Oct 21 06:47 boinc_mmap_file
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc        95 Oct 21 06:47 pilot_heartbeat.json
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc       893 Oct 21 06:47 pilotlog.txt
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc     81734 Oct 21 06:47 log.46771637._066489.job.log.1
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc       188 Oct 21 06:47 output.list
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc       620 Oct 21 06:47 runtime_log
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc    122880 Oct 21 06:47 result.tar.gz
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc      8526 Oct 21 06:47 runtime_log.err
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc       645 Oct 21 06:47 phxKDmpdPV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRTfMDmZVArrn.diag
[2025-10-21 06:47:36] -rw-r--r--. 1 boinc boinc     21604 Oct 21 06:47 stderr.txt
[2025-10-21 06:47:36] No HITS result produced
[2025-10-21 06:47:36]  *** Contents of shared directory: ***
[2025-10-21 06:47:36] total 222520
[2025-10-21 06:47:36] -rw-r--r--. 2 boinc boinc 227144684 Oct 21 06:44 ATLAS.root_0
[2025-10-21 06:47:36] -rw-r--r--. 2 boinc boinc     15120 Oct 21 06:44 start_atlas.sh
[2025-10-21 06:47:36] -rw-r--r--. 2 boinc boinc    569674 Oct 21 06:44 input.tar.gz
[2025-10-21 06:47:36] -rw-------. 1 boinc boinc    122880 Oct 21 06:47 result.tar.gz
06:47:38 (4052001): run_atlas exited; CPU time 22.627332
06:47:38 (4052001): called boinc_finish(0)

</stderr_txt>
]]>

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