Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:42:09 (1375611): wrapper (7.7.26015): starting
00:42:09 (1375611): wrapper: running run_atlas (--nthreads 3)
[2025-10-22 00:42:09] Arguments: --nthreads 3
[2025-10-22 00:42:09] Threads: 3
[2025-10-22 00:42:09] Checking for CVMFS
[2025-10-22 00:42:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-22 00:42:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-22 00:42:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-22 00:42:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-22 00:42:09] 2.9.2.0 987162 1323 76776 151974 0 56 30714883 36864001 0 130560 0 1022422 99.988 49773 2452 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-22 00:42:09] CVMFS is ok
[2025-10-22 00:42:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-22 00:42:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-22 00:42:09] Further information can be found at the LHC@home message board.
[2025-10-22 00:42:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-22 00:42:09] Checking for apptainer binary...
[2025-10-22 00:42:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-22 00:42:09] Running /usr/bin/apptainer --version
[2025-10-22 00:42:09] apptainer version 1.4.1-1.1
[2025-10-22 00:42:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-22 00:42:09] thA305b
[2025-10-22 00:42:09] apptainer works
[2025-10-22 00:42:09] Set ATHENA_PROC_NUMBER=3
[2025-10-22 00:42:09] Set ATHENA_CORE_NUMBER=3
[2025-10-22 00:42:09] Starting ATLAS job with PandaID=6852948242
[2025-10-22 00:42:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 02:15:29]  *** The last 200 lines of the pilot log: ***
[2025-10-22 02:15:29] 2025-10-22 00:14:56,822 | INFO     | will attempt to kill all subprocesses of pid=1385764
[2025-10-22 02:15:29] 2025-10-22 00:14:56,870 | INFO     | process IDs to be killed: [1385764] (in reverse order)
[2025-10-22 02:15:29] 2025-10-22 00:14:56,897 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 02:15:29] 2025-10-22 00:14:56,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 02:15:29] 2025-10-22 00:14:56,899 | INFO     | did not find any defunct processes belonging to 1385764
[2025-10-22 02:15:29] 2025-10-22 00:14:56,900 | INFO     | did not find any defunct processes belonging to 1385764
[2025-10-22 02:15:29] 2025-10-22 00:14:56,900 | INFO     | ready for new job
[2025-10-22 02:15:29] 2025-10-22 00:14:56,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 02:15:29] 2025-10-22 00:14:56,901 | INFO     | ***************************************
[2025-10-22 02:15:29] 2025-10-22 00:14:56,901 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 02:15:29] 2025-10-22 00:14:56,901 | INFO     | ***************************************
[2025-10-22 02:15:29] 2025-10-22 00:14:56,901 | INFO     | 
[2025-10-22 02:15:29] 2025-10-22 00:14:56,901 | INFO     | architecture information:
[2025-10-22 02:15:29] 2025-10-22 00:14:56,901 | INFO     | executing command: cat /etc/os-release
[2025-10-22 02:15:29] 2025-10-22 00:14:56,911 | INFO     | cat /etc/os-release:
[2025-10-22 02:15:29] NAME="CentOS Linux"
[2025-10-22 02:15:29] VERSION="7 (Core)"
[2025-10-22 02:15:29] ID="centos"
[2025-10-22 02:15:29] ID_LIKE="rhel fedora"
[2025-10-22 02:15:29] VERSION_ID="7"
[2025-10-22 02:15:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 02:15:29] ANSI_COLOR="0;31"
[2025-10-22 02:15:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 02:15:29] HOME_URL="https://www.centos.org/"
[2025-10-22 02:15:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 02:15:29] 
[2025-10-22 02:15:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 02:15:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 02:15:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 02:15:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 02:15:29] 
[2025-10-22 02:15:29] 2025-10-22 00:14:56,911 | INFO     | ***************************************
[2025-10-22 02:15:29] 2025-10-22 00:14:57,414 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-22 02:15:29] 2025-10-22 00:14:57,428 | INFO     | sufficient remaining disk space (173207977984 B)
[2025-10-22 02:15:29] 2025-10-22 00:14:57,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 02:15:29] 2025-10-22 00:14:57,429 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 02:15:29] 2025-10-22 00:14:57,429 | INFO     | update_server=False
[2025-10-22 02:15:29] 2025-10-22 00:14:57,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 02:15:29] 2025-10-22 00:14:57,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 02:15:29] 2025-10-22 00:14:57,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 02:15:29] 2025-10-22 00:14:57,429 | INFO     | aborting loop
[2025-10-22 02:15:29] 2025-10-22 00:14:57,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 02:15:29] 2025-10-22 00:14:57,702 | INFO     | all job control threads have been joined
[2025-10-22 02:15:29] 2025-10-22 00:14:58,101 | INFO     | all data control threads have been joined
[2025-10-22 02:15:29] 2025-10-22 00:14:58,435 | INFO     | [job] job monitor thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:58,435 | INFO     | [job] queue monitor thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:58,435 | INFO     | [job] retrieve thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:58,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 02:15:29] 2025-10-22 00:14:58,708 | INFO     | [job] control thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:58,906 | INFO     | all payload control threads have been joined
[2025-10-22 02:15:29] 2025-10-22 00:14:59,068 | INFO     | [payload] failed_post thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:59,107 | INFO     | [data] control thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:59,186 | INFO     | [data] copytool_in thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:59,271 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:59,447 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:59,480 | INFO     | [job] validate thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:59,583 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:59,900 | INFO     | [payload] validate_post thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:14:59,911 | INFO     | [payload] control thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:15:00,550 | INFO     | [data] copytool_out thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:15:01,436 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:15:07,578 | INFO     | job.realtimelogging is not enabled
[2025-10-22 02:15:29] 2025-10-22 00:15:08,583 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 02:15:29] 2025-10-22 00:15:23,135 | INFO     | [monitor] cgroup control has ended
[2025-10-22 02:15:29] 2025-10-22 00:15:23,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388902836032)>', '<ExcThread(monitor, started 140388035712768)>']
[2025-10-22 02:15:29] 2025-10-22 00:15:27,003 | INFO     | PID=1379333 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-22 02:15:29] 2025-10-22 00:15:27,003 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 02:15:29] 2025-10-22 00:15:27,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 02:15:29] 2025-10-22 00:15:27,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 02:15:29] 2025-10-22 00:15:27,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 02:15:29] 2025-10-22 00:15:27,003 | INFO     | [monitor] control thread has ended
[2025-10-22 02:15:29] 2025-10-22 00:15:29,017 | INFO     | all workflow threads have been joined
[2025-10-22 02:15:29] 2025-10-22 00:15:29,018 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 02:15:29] 2025-10-22 00:15:29,018 | INFO     | traces error code: 0
[2025-10-22 02:15:29] 2025-10-22 00:15:29,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 02:15:29] 2025-10-22 00:15:29,071 [wrapper] ==== pilot stdout END ====
[2025-10-22 02:15:29] 2025-10-22 00:15:29,074 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 02:15:29] 2025-10-22 00:15:29,076 [wrapper] pilotpid: 1379333
[2025-10-22 02:15:29] 2025-10-22 00:15:29,078 [wrapper] Pilot exit status: 0
[2025-10-22 02:15:29] 2025-10-22 00:15:29,086 [wrapper] pandaids: 6852948242
[2025-10-22 02:15:29] 2025-10-22 00:15:29,104 [wrapper] cleanup supervisor_pilot 1397994 1379334
[2025-10-22 02:15:29] 2025-10-22 00:15:29,107 [wrapper] Test setup, not cleaning
[2025-10-22 02:15:29] 2025-10-22 00:15:29,109 [wrapper] apfmon messages muted
[2025-10-22 02:15:29] 2025-10-22 00:15:29,112 [wrapper] ==== wrapper stdout END ====
[2025-10-22 02:15:29] 2025-10-22 00:15:29,114 [wrapper] ==== wrapper stderr END ====
[2025-10-22 02:15:29]  *** Error codes and diagnostics ***
[2025-10-22 02:15:29]     "exeErrorCode": 0,
[2025-10-22 02:15:29]     "exeErrorDiag": "",
[2025-10-22 02:15:29]     "pilotErrorCode": 0,
[2025-10-22 02:15:29]     "pilotErrorDiag": "",
[2025-10-22 02:15:29]  *** Listing of results directory ***
[2025-10-22 02:15:29] total 436404
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc    557409 Oct 20 23:57 pilot3.tar.gz
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc      5112 Oct 21 00:48 queuedata.json
[2025-10-22 02:15:29] -rwx------ 1 boinc boinc     36292 Oct 21 00:49 runpilot2-wrapper.sh
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc       100 Oct 22 00:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 02:15:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 22 00:42 run_atlas
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc       105 Oct 22 00:42 job.xml
[2025-10-22 02:15:29] -rw-r--r-- 2 boinc boinc 229488503 Oct 22 00:42 EVNT.46771634._001039.pool.root.1
[2025-10-22 02:15:29] -rw-r--r-- 2 boinc boinc    569679 Oct 22 00:42 input.tar.gz
[2025-10-22 02:15:29] -rw-r--r-- 2 boinc boinc     15120 Oct 22 00:42 start_atlas.sh
[2025-10-22 02:15:29] drwxrwx--x 2 boinc boinc      4096 Oct 22 00:42 shared
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc         0 Oct 22 00:42 boinc_setup_complete
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc      6447 Oct 22 00:42 init_data.xml
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc         0 Oct 22 00:42 boinc_lockfile
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc      2560 Oct 22 00:42 pandaJob.out
[2025-10-22 02:15:29] -rw------- 1 boinc boinc    978456 Oct 22 00:42 agis_schedconf.cvmfs.json
[2025-10-22 02:15:29] -rw------- 1 boinc boinc   1560740 Oct 22 00:42 agis_ddmendpoints.agis.ALL.json
[2025-10-22 02:15:29] drwx------ 5 boinc boinc      4096 Oct 22 00:42 pilot3
[2025-10-22 02:15:29] -rw------- 1 boinc boinc 211340285 Oct 22 02:14 HITS.46771637._054347.pool.root.1
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc       529 Oct 22 02:14 boinc_task_state.xml
[2025-10-22 02:15:29] -rw------- 1 boinc boinc        95 Oct 22 02:14 pilot_heartbeat.json
[2025-10-22 02:15:29] -rw------- 1 boinc boinc      1016 Oct 22 02:14 memory_monitor_summary.json
[2025-10-22 02:15:29] -rw------- 1 boinc boinc    263528 Oct 22 02:14 log.46771637._054347.job.log.tgz.1
[2025-10-22 02:15:29] -rw------- 1 boinc boinc      7755 Oct 22 02:14 heartbeat.json
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc      8192 Oct 22 02:15 boinc_mmap_file
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc        27 Oct 22 02:15 wrapper_checkpoint.txt
[2025-10-22 02:15:29] -rw------- 1 boinc boinc      4824 Oct 22 02:15 pilotlog.txt
[2025-10-22 02:15:29] -rw------- 1 boinc boinc    811298 Oct 22 02:15 log.46771637._054347.job.log.1
[2025-10-22 02:15:29] -rw------- 1 boinc boinc       357 Oct 22 02:15 output.list
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc       620 Oct 22 02:15 runtime_log
[2025-10-22 02:15:29] -rw------- 1 boinc boinc   1095680 Oct 22 02:15 result.tar.gz
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc      8782 Oct 22 02:15 runtime_log.err
[2025-10-22 02:15:29] -rw------- 1 boinc boinc       659 Oct 22 02:15 6LWMDmPsDV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmj8dMDmiUOTZn.diag
[2025-10-22 02:15:29] -rw-r--r-- 1 boinc boinc     10289 Oct 22 02:15 stderr.txt
[2025-10-22 02:15:29] HITS file was successfully produced:
[2025-10-22 02:15:29] -rw------- 1 boinc boinc 211340285 Oct 22 02:14 shared/HITS.pool.root.1
[2025-10-22 02:15:29]  *** Contents of shared directory: ***
[2025-10-22 02:15:29] total 432156
[2025-10-22 02:15:29] -rw-r--r-- 2 boinc boinc 229488503 Oct 22 00:42 ATLAS.root_0
[2025-10-22 02:15:29] -rw-r--r-- 2 boinc boinc    569679 Oct 22 00:42 input.tar.gz
[2025-10-22 02:15:29] -rw-r--r-- 2 boinc boinc     15120 Oct 22 00:42 start_atlas.sh
[2025-10-22 02:15:29] -rw------- 1 boinc boinc 211340285 Oct 22 02:14 HITS.pool.root.1
[2025-10-22 02:15:29] -rw------- 1 boinc boinc   1095680 Oct 22 02:15 result.tar.gz
02:15:30 (1375611): run_atlas exited; CPU time 16040.897248
02:15:30 (1375611): called boinc_finish(0)

</stderr_txt>
]]>

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