Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:10:01 (24676): wrapper (7.7.26015): starting
08:10:01 (24676): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 08:10:01] Arguments: --nthreads 8
[2025-10-21 08:10:01] Threads: 8
[2025-10-21 08:10:01] Checking for CVMFS
[2025-10-21 08:10:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 08:10:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 08:10:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 08:10:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 08:10:01] 2.11.2.0 31396 65799 135864 151957 1 57 18227111 18432001 1009 130560 0 59580236 99.979 2676964 38934 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-21 08:10:01] CVMFS is ok
[2025-10-21 08:10:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 08:10:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 08:10:01] Further information can be found at the LHC@home message board.
[2025-10-21 08:10:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 08:10:01] Checking for apptainer binary...
[2025-10-21 08:10:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 08:10:01] Running /usr/bin/apptainer --version
[2025-10-21 08:10:01] apptainer version 1.3.2-1.el7
[2025-10-21 08:10:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 08:10:02] c-206-10.aglt2.org
[2025-10-21 08:10:02] apptainer works
[2025-10-21 08:10:02] Set ATHENA_PROC_NUMBER=8
[2025-10-21 08:10:02] Set ATHENA_CORE_NUMBER=8
[2025-10-21 08:10:02] Starting ATLAS job with PandaID=6852986529
[2025-10-21 08:10:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 11:32:37]  *** The last 200 lines of the pilot log: ***
[2025-10-21 11:32:37] 2025-10-21 15:31:55,397 | INFO     | intersect: -21698701817.766182
[2025-10-21 11:32:37] 2025-10-21 15:31:55,397 | INFO     | chi2: 1.1950697332957458
[2025-10-21 11:32:37] 2025-10-21 15:31:55,398 | INFO     | sum of square deviations: 2229146912.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,400 | INFO     | sum of deviations: 28709549472.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,400 | INFO     | mean x: 1761054492.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,400 | INFO     | mean y: 2478818.165803109
[2025-10-21 11:32:37] 2025-10-21 15:31:55,400 | INFO     | -- intersect: -22678431438.933407
[2025-10-21 11:32:37] 2025-10-21 15:31:55,400 | INFO     | intersect: -22678431438.933407
[2025-10-21 11:32:37] 2025-10-21 15:31:55,401 | INFO     | chi2: 1.195504218386789
[2025-10-21 11:32:37] 2025-10-21 15:31:55,401 | INFO     | current chi2=1.195504218386789 (change=-0.036356463471377595 %)
[2025-10-21 11:32:37] 2025-10-21 15:31:55,401 | INFO     | right removable region: 192
[2025-10-21 11:32:37] 2025-10-21 15:31:55,402 | INFO     | sum of square deviations: 2229146912.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,403 | INFO     | sum of deviations: 3511464024.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,403 | INFO     | mean x: 1761054797.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,404 | INFO     | mean y: 2501806.445595855
[2025-10-21 11:32:37] 2025-10-21 15:31:55,404 | INFO     | -- intersect: -2771600039.7220573
[2025-10-21 11:32:37] 2025-10-21 15:31:55,404 | INFO     | intersect: -2771600039.7220573
[2025-10-21 11:32:37] 2025-10-21 15:31:55,404 | INFO     | chi2: 0.007443157763297123
[2025-10-21 11:32:37] 2025-10-21 15:31:55,405 | INFO     | current chi2=0.007443157763297123 (change=99.3771779540621 %)
[2025-10-21 11:32:37] 2025-10-21 15:31:55,405 | INFO     | sum of square deviations: 2060343747.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,407 | INFO     | sum of deviations: 1164577169.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,407 | INFO     | mean x: 1761054949.5
[2025-10-21 11:32:37] 2025-10-21 15:31:55,407 | INFO     | mean y: 2503913.765957447
[2025-10-21 11:32:37] 2025-10-21 15:31:55,407 | INFO     | -- intersect: -992904930.2817285
[2025-10-21 11:32:37] 2025-10-21 15:31:55,407 | INFO     | intersect: -992904930.2817285
[2025-10-21 11:32:37] 2025-10-21 15:31:55,408 | INFO     | chi2: 0.0018278584928887625
[2025-10-21 11:32:37] 2025-10-21 15:31:55,408 | INFO     | current chi2=0.0018278584928887625 (change=75.4424324860868 %)
[2025-10-21 11:32:37] 2025-10-21 15:31:55,408 | INFO     | sum of square deviations: 1900284932.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,410 | INFO     | sum of deviations: 155097929.00000012
[2025-10-21 11:32:37] 2025-10-21 15:31:55,410 | INFO     | mean x: 1761055102.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,410 | INFO     | mean y: 2504873.0327868853
[2025-10-21 11:32:37] 2025-10-21 15:31:55,410 | INFO     | -- intersect: -141229361.0157963
[2025-10-21 11:32:37] 2025-10-21 15:31:55,410 | INFO     | intersect: -141229361.0157963
[2025-10-21 11:32:37] 2025-10-21 15:31:55,411 | INFO     | chi2: 0.0008798252596684094
[2025-10-21 11:32:37] 2025-10-21 15:31:55,411 | INFO     | current chi2=0.0008798252596684094 (change=51.865789223216815 %)
[2025-10-21 11:32:37] 2025-10-21 15:31:55,411 | INFO     | sum of square deviations: 1748737904.5
[2025-10-21 11:32:37] 2025-10-21 15:31:55,413 | INFO     | sum of deviations: -255875998.49999988
[2025-10-21 11:32:37] 2025-10-21 15:31:55,413 | INFO     | mean x: 1761055254.5
[2025-10-21 11:32:37] 2025-10-21 15:31:55,413 | INFO     | mean y: 2505284.387640449
[2025-10-21 11:32:37] 2025-10-21 15:31:55,413 | INFO     | -- intersect: 260183562.24695066
[2025-10-21 11:32:37] 2025-10-21 15:31:55,413 | INFO     | intersect: 260183562.24695066
[2025-10-21 11:32:37] 2025-10-21 15:31:55,414 | INFO     | chi2: 0.0006699175824968715
[2025-10-21 11:32:37] 2025-10-21 15:31:55,414 | INFO     | current chi2=0.0006699175824968715 (change=23.857882558480803 %)
[2025-10-21 11:32:37] 2025-10-21 15:31:55,414 | INFO     | left removable region: 40
[2025-10-21 11:32:37] 2025-10-21 15:31:55,415 | INFO     | sum of square deviations: 1088905998.0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,416 | INFO     | sum of deviations: -517532875.5000002
[2025-10-21 11:32:37] 2025-10-21 15:31:55,416 | INFO     | mean x: 1761055681.5
[2025-10-21 11:32:37] 2025-10-21 15:31:55,416 | INFO     | mean y: 2505142.7960526315
[2025-10-21 11:32:37] 2025-10-21 15:31:55,416 | INFO     | -- intersect: 839495858.6487423
[2025-10-21 11:32:37] 2025-10-21 15:31:55,416 | INFO     | intersect: 839495858.6487423
[2025-10-21 11:32:37] 2025-10-21 15:31:55,417 | INFO     | chi2: 0.0005652551977320221
[2025-10-21 11:32:37] 2025-10-21 15:31:55,417 | INFO     | -- intersect: 839495858.6487423
[2025-10-21 11:32:37] 2025-10-21 15:31:55,417 | INFO     | current memory leak: -0.48 B/s (using 152 data points, chi2=0.00)
[2025-10-21 11:32:37] 2025-10-21 15:31:55,418 | INFO     | could have reported an average CPU frequency of 2421 MHz (10 samples)
[2025-10-21 11:32:37] 2025-10-21 15:31:55,418 | INFO     | ..............................
[2025-10-21 11:32:37] 2025-10-21 15:31:55,418 | INFO     | . Timing measurements:
[2025-10-21 11:32:37] 2025-10-21 15:31:55,419 | INFO     | . get job = 0 s
[2025-10-21 11:32:37] 2025-10-21 15:31:55,419 | INFO     | . initial setup = 2 s
[2025-10-21 11:32:37] 2025-10-21 15:31:55,419 | INFO     | . payload setup = 5 s
[2025-10-21 11:32:37] 2025-10-21 15:31:55,419 | INFO     | . stage-in = 0 s
[2025-10-21 11:32:37] 2025-10-21 15:31:55,419 | INFO     | . payload execution = 12073 s
[2025-10-21 11:32:37] 2025-10-21 15:31:55,419 | INFO     | . stage-out = 1 s
[2025-10-21 11:32:37] 2025-10-21 15:31:55,420 | INFO     | . log creation = 0 s
[2025-10-21 11:32:37] 2025-10-21 15:31:55,420 | INFO     | ..............................
[2025-10-21 11:32:37] 2025-10-21 15:31:55,516 | INFO     | 
[2025-10-21 11:32:37] 2025-10-21 15:31:55,516 | INFO     | job summary report
[2025-10-21 11:32:37] 2025-10-21 15:31:55,516 | INFO     | --------------------------------------------------
[2025-10-21 11:32:37] 2025-10-21 15:31:55,516 | INFO     | PanDA job id: 6852986529
[2025-10-21 11:32:37] 2025-10-21 15:31:55,516 | INFO     | task id: 46771637
[2025-10-21 11:32:37] 2025-10-21 15:31:55,517 | INFO     | errors: (none)
[2025-10-21 11:32:37] 2025-10-21 15:31:55,517 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 11:32:37] 2025-10-21 15:31:55,517 | INFO     | pilot state: finished 
[2025-10-21 11:32:37] 2025-10-21 15:31:55,517 | INFO     | transexitcode: 0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,517 | INFO     | exeerrorcode: 0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,517 | INFO     | exeerrordiag: 
[2025-10-21 11:32:37] 2025-10-21 15:31:55,517 | INFO     | exitcode: 0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,517 | INFO     | exitmsg: OK
[2025-10-21 11:32:37] 2025-10-21 15:31:55,517 | INFO     | cpuconsumptiontime: 92454 s
[2025-10-21 11:32:37] 2025-10-21 15:31:55,517 | INFO     | nevents: 400
[2025-10-21 11:32:37] 2025-10-21 15:31:55,518 | INFO     | neventsw: 0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,518 | INFO     | pid: 3407
[2025-10-21 11:32:37] 2025-10-21 15:31:55,518 | INFO     | pgrp: 3407
[2025-10-21 11:32:37] 2025-10-21 15:31:55,518 | INFO     | corecount: 8
[2025-10-21 11:32:37] 2025-10-21 15:31:55,518 | INFO     | event service: False
[2025-10-21 11:32:37] 2025-10-21 15:31:55,518 | INFO     | sizes: {0: 2348878, 4: 2349140, 11: 2349168, 12081: 2378749, 12082: 2378748, 12084: 2387802, 12085: 2387986, 12089: 2388180}
[2025-10-21 11:32:37] 2025-10-21 15:31:55,518 | INFO     | --------------------------------------------------
[2025-10-21 11:32:37] 2025-10-21 15:31:55,518 | INFO     | 
[2025-10-21 11:32:37] 2025-10-21 15:31:55,518 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 11:32:37] 2025-10-21 15:31:55,534 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,534 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 11:32:37] 2025-10-21 15:31:55,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 11:32:37] 2025-10-21 15:31:55,536 | INFO     | job 6852986529 has completed (purged errors)
[2025-10-21 11:32:37] 2025-10-21 15:31:55,536 | INFO     | overall cleanup function is called
[2025-10-21 11:32:37] 2025-10-21 15:31:56,542 | INFO     | --- collectZombieJob: --- 10, [3407]
[2025-10-21 11:32:37] 2025-10-21 15:31:56,543 | INFO     | zombie collector waiting for pid 3407
[2025-10-21 11:32:37] 2025-10-21 15:31:56,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 11:32:37] 2025-10-21 15:31:56,543 | INFO     | collected zombie processes
[2025-10-21 11:32:37] 2025-10-21 15:31:56,543 | INFO     | will attempt to kill all subprocesses of pid=3407
[2025-10-21 11:32:37] 2025-10-21 15:31:56,648 | INFO     | process IDs to be killed: [3407] (in reverse order)
[2025-10-21 11:32:37] 2025-10-21 15:31:56,686 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 11:32:37] 2025-10-21 15:31:56,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 11:32:37] 2025-10-21 15:31:56,689 | INFO     | did not find any defunct processes belonging to 3407
[2025-10-21 11:32:37] 2025-10-21 15:31:56,692 | INFO     | did not find any defunct processes belonging to 3407
[2025-10-21 11:32:37] 2025-10-21 15:31:56,692 | INFO     | ready for new job
[2025-10-21 11:32:37] 2025-10-21 15:31:56,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 11:32:37] 2025-10-21 15:31:56,693 | INFO     | ***************************************
[2025-10-21 11:32:37] 2025-10-21 15:31:56,694 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 11:32:37] 2025-10-21 15:31:56,694 | INFO     | ***************************************
[2025-10-21 11:32:37] 2025-10-21 15:31:56,694 | INFO     | 
[2025-10-21 11:32:37] 2025-10-21 15:31:56,695 | INFO     | architecture information:
[2025-10-21 11:32:37] 2025-10-21 15:31:56,695 | INFO     | executing command: cat /etc/os-release
[2025-10-21 11:32:37] 2025-10-21 15:31:56,705 | INFO     | cat /etc/os-release:
[2025-10-21 11:32:37] NAME="CentOS Linux"
[2025-10-21 11:32:37] VERSION="7 (Core)"
[2025-10-21 11:32:37] ID="centos"
[2025-10-21 11:32:37] ID_LIKE="rhel fedora"
[2025-10-21 11:32:37] VERSION_ID="7"
[2025-10-21 11:32:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 11:32:37] ANSI_COLOR="0;31"
[2025-10-21 11:32:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 11:32:37] HOME_URL="https://www.centos.org/"
[2025-10-21 11:32:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 11:32:37] 
[2025-10-21 11:32:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 11:32:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 11:32:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 11:32:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 11:32:37] 
[2025-10-21 11:32:37] 2025-10-21 15:31:56,706 | INFO     | ***************************************
[2025-10-21 11:32:37] 2025-10-21 15:31:57,209 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 11:32:37] 2025-10-21 15:31:57,221 | INFO     | sufficient remaining disk space (27938258944 B)
[2025-10-21 11:32:37] 2025-10-21 15:31:57,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 11:32:37] 2025-10-21 15:31:57,221 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 11:32:37] 2025-10-21 15:31:57,221 | INFO     | update_server=False
[2025-10-21 11:32:37] 2025-10-21 15:31:57,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 11:32:37] 2025-10-21 15:31:57,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 11:32:37] 2025-10-21 15:31:57,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 11:32:37] 2025-10-21 15:31:57,463 | INFO     | all data control threads have been joined
[2025-10-21 11:32:37] 2025-10-21 15:31:57,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 11:32:37] 2025-10-21 15:31:57,506 | INFO     | all job control threads have been joined
[2025-10-21 11:32:37] 2025-10-21 15:31:57,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 11:32:37] 2025-10-21 15:31:57,636 | INFO     | aborting loop
[2025-10-21 11:32:37] 2025-10-21 15:31:57,662 | INFO     | all payload control threads have been joined
[2025-10-21 11:32:37] 2025-10-21 15:31:58,227 | INFO     | [job] retrieve thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:58,228 | INFO     | [job] queue monitor thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:58,384 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:58,468 | INFO     | [data] control thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:58,511 | INFO     | [job] control thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:58,641 | INFO     | [job] job monitor thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:58,668 | INFO     | [payload] control thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:58,896 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:58,946 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:59,068 | INFO     | [payload] validate_post thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:59,163 | INFO     | [payload] failed_post thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:59,228 | INFO     | [data] copytool_out thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:59,535 | INFO     | [data] copytool_in thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:31:59,536 | INFO     | [job] validate thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:32:01,486 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:32:07,351 | INFO     | job.realtimelogging is not enabled
[2025-10-21 11:32:37] 2025-10-21 15:32:08,353 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 11:32:37] 2025-10-21 15:32:27,474 | INFO     | PID=29188 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 11:32:37] 2025-10-21 15:32:27,474 | INFO     | .. there are 3 such processes running
[2025-10-21 11:32:37] 2025-10-21 15:32:27,474 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 11:32:37] 2025-10-21 15:32:27,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 11:32:37] 2025-10-21 15:32:27,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 11:32:37] 2025-10-21 15:32:31,984 | INFO     | [monitor] cgroup control has ended
[2025-10-21 11:32:37] 2025-10-21 15:32:32,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543672170304)>', '<ExcThread(monitor, started 140543359162112)>']
[2025-10-21 11:32:37] 2025-10-21 15:32:32,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 11:32:37] 2025-10-21 15:32:32,498 | INFO     | [monitor] control thread has ended
[2025-10-21 11:32:37] 2025-10-21 15:32:37,241 | INFO     | all workflow threads have been joined
[2025-10-21 11:32:37] 2025-10-21 15:32:37,241 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 11:32:37] 2025-10-21 15:32:37,241 | INFO     | traces error code: 0
[2025-10-21 11:32:37] 2025-10-21 15:32:37,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 11:32:37] 2025-10-21 15:32:37,331 [wrapper] ==== pilot stdout END ====
[2025-10-21 11:32:37] 2025-10-21 15:32:37,333 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 11:32:37] 2025-10-21 15:32:37,335 [wrapper] pilotpid: 29188
[2025-10-21 11:32:37] 2025-10-21 15:32:37,337 [wrapper] Pilot exit status: 0
[2025-10-21 11:32:37] 2025-10-21 15:32:37,345 [wrapper] pandaids: 6852986529
[2025-10-21 11:32:37] 2025-10-21 15:32:37,371 [wrapper] cleanup supervisor_pilot 13270 29189
[2025-10-21 11:32:37] 2025-10-21 15:32:37,374 [wrapper] Test setup, not cleaning
[2025-10-21 11:32:37] 2025-10-21 15:32:37,376 [wrapper] apfmon messages muted
[2025-10-21 11:32:37] 2025-10-21 15:32:37,378 [wrapper] ==== wrapper stdout END ====
[2025-10-21 11:32:37] 2025-10-21 15:32:37,380 [wrapper] ==== wrapper stderr END ====
[2025-10-21 11:32:37]  *** Error codes and diagnostics ***
[2025-10-21 11:32:37]     "exeErrorCode": 0,
[2025-10-21 11:32:37]     "exeErrorDiag": "",
[2025-10-21 11:32:37]     "pilotErrorCode": 0,
[2025-10-21 11:32:37]     "pilotErrorDiag": "",
[2025-10-21 11:32:37]  *** Listing of results directory ***
[2025-10-21 11:32:37] total 434636
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas    557409 Oct 20 23:49 pilot3.tar.gz
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas      5112 Oct 21 00:33 queuedata.json
[2025-10-21 11:32:37] -rwx------ 1 boincer umatlas     36292 Oct 21 00:34 runpilot2-wrapper.sh
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas       100 Oct 21 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 11:32:37] -rwxr-xr-x 1 boincer umatlas      7986 Oct 21 08:10 run_atlas
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas       105 Oct 21 08:10 job.xml
[2025-10-21 11:32:37] -rw-r--r-- 2 boincer umatlas 227375674 Oct 21 08:10 EVNT.46771634._002428.pool.root.1
[2025-10-21 11:32:37] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 08:10 start_atlas.sh
[2025-10-21 11:32:37] drwxrwx--x 2 boincer umatlas      4096 Oct 21 08:10 shared
[2025-10-21 11:32:37] -rw-r--r-- 2 boincer umatlas    569672 Oct 21 08:10 input.tar.gz
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas         0 Oct 21 08:10 boinc_lockfile
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas      2558 Oct 21 08:10 pandaJob.out
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas    978838 Oct 21 08:10 agis_schedconf.cvmfs.json
[2025-10-21 11:32:37] drwx------ 5 boincer umatlas      4096 Oct 21 08:10 pilot3
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas      5952 Oct 21 11:27 init_data.xml
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas 209550024 Oct 21 11:31 HITS.46771637._061637.pool.root.1
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas        95 Oct 21 11:31 pilot_heartbeat.json
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas      1054 Oct 21 11:31 memory_monitor_summary.json
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas   1560740 Oct 21 11:31 agis_ddmendpoints.agis.ALL.json
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas    423526 Oct 21 11:31 log.46771637._061637.job.log.tgz.1
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas       531 Oct 21 11:31 boinc_task_state.xml
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas      7856 Oct 21 11:31 heartbeat.json
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas      8192 Oct 21 11:32 boinc_mmap_file
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas        28 Oct 21 11:32 wrapper_checkpoint.txt
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas      4893 Oct 21 11:32 pilotlog.txt
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas   1695364 Oct 21 11:32 log.46771637._061637.job.log.1
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas       357 Oct 21 11:32 output.list
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas       620 Oct 21 11:32 runtime_log
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas   2140160 Oct 21 11:32 result.tar.gz
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas      8704 Oct 21 11:32 runtime_log.err
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas       662 Oct 21 11:32 ofTMDmFGJV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCR1NDm8ovUAn.diag
[2025-10-21 11:32:37] -rw-r--r-- 1 boincer umatlas     20896 Oct 21 11:32 stderr.txt
[2025-10-21 11:32:37] HITS file was successfully produced:
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas 209550024 Oct 21 11:31 shared/HITS.pool.root.1
[2025-10-21 11:32:37]  *** Contents of shared directory: ***
[2025-10-21 11:32:37] total 429360
[2025-10-21 11:32:37] -rw-r--r-- 2 boincer umatlas 227375674 Oct 21 08:10 ATLAS.root_0
[2025-10-21 11:32:37] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 08:10 start_atlas.sh
[2025-10-21 11:32:37] -rw-r--r-- 2 boincer umatlas    569672 Oct 21 08:10 input.tar.gz
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas 209550024 Oct 21 11:31 HITS.pool.root.1
[2025-10-21 11:32:37] -rw------- 1 boincer umatlas   2140160 Oct 21 11:32 result.tar.gz
11:32:38 (24676): run_atlas exited; CPU time 92605.425973
11:32:38 (24676): called boinc_finish(0)

</stderr_txt>
]]>

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