Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
18:57:32 (1063611): wrapper (7.7.26015): starting
18:57:32 (1063611): wrapper: running run_atlas (--nthreads 4)
[2025-10-21 18:57:32] Arguments: --nthreads 4
[2025-10-21 18:57:32] Threads: 4
[2025-10-21 18:57:32] Checking for CVMFS
[2025-10-21 18:57:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 18:57:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 18:57:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 18:57:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 18:57:32] 2.13.1.0 485984 488 50004 151965 0 188 3830255 4096000 2766 130560 0 1817068 99.995 25698 1618 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-21 18:57:32] CVMFS is ok
[2025-10-21 18:57:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 18:57:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-21 18:57:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-21 18:57:32] Further information can be found at the LHC@home message board.
[2025-10-21 18:57:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 18:57:32] Checking for apptainer binary...
[2025-10-21 18:57:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 18:57:32] Running /usr/bin/apptainer --version
[2025-10-21 18:57:32] apptainer version 1.2.3
[2025-10-21 18:57:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 18:57:32] Ryzen-7-7700-Zen4-Deb12
[2025-10-21 18:57:32] apptainer works
[2025-10-21 18:57:32] Set ATHENA_PROC_NUMBER=4
[2025-10-21 18:57:32] Set ATHENA_CORE_NUMBER=4
[2025-10-21 18:57:32] Starting ATLAS job with PandaID=6853514594
[2025-10-21 18:57:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 19:54:48]  *** The last 200 lines of the pilot log: ***
[2025-10-21 19:54:48]  lfn=log.46809188._005079.job.log.tgz.1
[2025-10-21 19:54:48]  mtime=0
[2025-10-21 19:54:48]  protocol_id=None
[2025-10-21 19:54:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-21 19:54:48]  replicas=None
[2025-10-21 19:54:48]  scope=mc23_13p6TeV
[2025-10-21 19:54:48]  status=None
[2025-10-21 19:54:48]  status_code=0
[2025-10-21 19:54:48]  storage_token=
[2025-10-21 19:54:48]  surl=/var/lib/boinc-client/slots/20/PanDA_Pilot-6853514594/log.46809188._005079.job.log.tgz.1
[2025-10-21 19:54:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/65/log.46809188._005079.job.log.tgz.1
[2025-10-21 19:54:48]  workdir=None
[2025-10-21 19:54:48] ]
[2025-10-21 19:54:48] 2025-10-21 17:53:50,353 | INFO     | transferring file log.46809188._005079.job.log.tgz.1 from /var/lib/boinc-client/slots/20/PanDA_Pilot-6853514594/log.46809188._005079.job.log.tgz.1 to /var/lib/boin
[2025-10-21 19:54:48] 2025-10-21 17:53:50,353 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/20/PanDA_Pilot-6853514594/log.46809188._005079.job.log.tgz.1 /var/lib/boinc-client/slots/20/log.4680
[2025-10-21 19:54:48] 2025-10-21 17:53:50,384 | INFO     | adding to output.list: log.46809188._005079.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/65/log.46809188._005079.job.log.tg
[2025-10-21 19:54:48] 2025-10-21 17:53:50,384 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-21 19:54:48] 2025-10-21 17:53:50,384 | INFO     | summary of transferred files:
[2025-10-21 19:54:48] 2025-10-21 17:53:50,384 | INFO     |  -- lfn=log.46809188._005079.job.log.tgz.1, status_code=0, status=transferred
[2025-10-21 19:54:48] 2025-10-21 17:53:50,385 | INFO     | stage-out finished correctly
[2025-10-21 19:54:48] 2025-10-21 17:53:51,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-21 19:54:48] 2025-10-21 17:53:51,513 | INFO     | job 6853514594 has state=finished
[2025-10-21 19:54:48] 2025-10-21 17:53:51,513 | INFO     | preparing for final server update for job 6853514594 in state='finished'
[2025-10-21 19:54:48] 2025-10-21 17:53:51,513 | INFO     | this job has now completed (state=finished)
[2025-10-21 19:54:48] 2025-10-21 17:53:51,513 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-21 19:54:48] 2025-10-21 17:53:51,513 | INFO     | log transfer has been attempted: DONE
[2025-10-21 19:54:48] 2025-10-21 17:53:51,513 | INFO     | job 6853514594 has finished - writing final server update
[2025-10-21 19:54:48] 2025-10-21 17:53:51,513 | INFO     | total number of processed events: 400 (read)
[2025-10-21 19:54:48] 2025-10-21 17:53:51,513 | INFO     | executing command: lscpu
[2025-10-21 19:54:48] 2025-10-21 17:53:51,527 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-21 19:54:48] 2025-10-21 17:53:52,354 | INFO     | time since job start (3375s) is within the limit (172800.0s)
[2025-10-21 19:54:48] 2025-10-21 17:53:53,548 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-21 19:54:48] 2025-10-21 17:53:53,549 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4831.453124999999
[2025-10-21 19:54:48] 2025-10-21 17:53:53,551 | INFO     | using path: /var/lib/boinc-client/slots/20/PanDA_Pilot-6853514594/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 19:54:48] 2025-10-21 17:53:53,551 | INFO     | extracted standard info from prmon json
[2025-10-21 19:54:48] 2025-10-21 17:53:53,551 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 19:54:48] 2025-10-21 17:53:53,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 19:54:48] 2025-10-21 17:53:53,551 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 19:54:48] 2025-10-21 17:53:53,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | fitting pss+swap vs Time
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | sum of square deviations: 34277852.0
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | sum of deviations: -2322430582.5
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | mean x: 1761067613.5
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | mean y: 2379691.3125
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | -- intersect: 119320162014.50737
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | intersect: 119320162014.50737
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | chi2: 0.02778276714935726
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | -- intersect: 119320162014.50737
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | current memory leak: -67.75 B/s (using 48 data points, chi2=0.03)
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | could have reported an average CPU frequency of 4826 MHz (5 samples)
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | ..............................
[2025-10-21 19:54:48] 2025-10-21 17:53:53,552 | INFO     | . Timing measurements:
[2025-10-21 19:54:48] 2025-10-21 17:53:53,553 | INFO     | . get job = 0 s
[2025-10-21 19:54:48] 2025-10-21 17:53:53,553 | INFO     | . initial setup = 1 s
[2025-10-21 19:54:48] 2025-10-21 17:53:53,553 | INFO     | . payload setup = 2 s
[2025-10-21 19:54:48] 2025-10-21 17:53:53,553 | INFO     | . stage-in = 0 s
[2025-10-21 19:54:48] 2025-10-21 17:53:53,553 | INFO     | . payload execution = 3354 s
[2025-10-21 19:54:48] 2025-10-21 17:53:53,553 | INFO     | . stage-out = 0 s
[2025-10-21 19:54:48] 2025-10-21 17:53:53,553 | INFO     | . log creation = 0 s
[2025-10-21 19:54:48] 2025-10-21 17:53:53,553 | INFO     | ..............................
[2025-10-21 19:54:48] 2025-10-21 17:53:53,624 | INFO     | 
[2025-10-21 19:54:48] 2025-10-21 17:53:53,624 | INFO     | job summary report
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | --------------------------------------------------
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | PanDA job id: 6853514594
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | task id: 46809188
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | errors: (none)
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | pilot state: finished 
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | transexitcode: 0
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | exeerrorcode: 0
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | exeerrordiag: 
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | exitcode: 0
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | exitmsg: OK
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | cpuconsumptiontime: 12733 s
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | nevents: 400
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | neventsw: 0
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | pid: 1074050
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | pgrp: 1074050
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | corecount: 4
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | event service: False
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | sizes: {0: 2348846, 2: 2349108, 11: 2349136, 3360: 2383818, 3361: 2383818, 3363: 2384044}
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | --------------------------------------------------
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | 
[2025-10-21 19:54:48] 2025-10-21 17:53:53,625 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/20
[2025-10-21 19:54:48] 2025-10-21 17:53:53,636 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,636 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | job 6853514594 has completed (purged errors)
[2025-10-21 19:54:48] 2025-10-21 17:53:53,637 | INFO     | overall cleanup function is called
[2025-10-21 19:54:48] 2025-10-21 17:53:54,644 | INFO     | --- collectZombieJob: --- 10, [1074050]
[2025-10-21 19:54:48] 2025-10-21 17:53:54,644 | INFO     | zombie collector waiting for pid 1074050
[2025-10-21 19:54:48] 2025-10-21 17:53:54,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 19:54:48] 2025-10-21 17:53:54,644 | INFO     | collected zombie processes
[2025-10-21 19:54:48] 2025-10-21 17:53:54,644 | INFO     | will attempt to kill all subprocesses of pid=1074050
[2025-10-21 19:54:48] 2025-10-21 17:53:54,685 | INFO     | process IDs to be killed: [1074050] (in reverse order)
[2025-10-21 19:54:48] 2025-10-21 17:53:54,712 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 19:54:48] 2025-10-21 17:53:54,712 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 19:54:48] 2025-10-21 17:53:54,714 | INFO     | did not find any defunct processes belonging to 1074050
[2025-10-21 19:54:48] 2025-10-21 17:53:54,715 | INFO     | did not find any defunct processes belonging to 1074050
[2025-10-21 19:54:48] 2025-10-21 17:53:54,715 | INFO     | ready for new job
[2025-10-21 19:54:48] 2025-10-21 17:53:54,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 19:54:48] 2025-10-21 17:53:54,716 | INFO     | ***************************************
[2025-10-21 19:54:48] 2025-10-21 17:53:54,716 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 19:54:48] 2025-10-21 17:53:54,716 | INFO     | ***************************************
[2025-10-21 19:54:48] 2025-10-21 17:53:54,716 | INFO     | 
[2025-10-21 19:54:48] 2025-10-21 17:53:54,717 | INFO     | architecture information:
[2025-10-21 19:54:48] 2025-10-21 17:53:54,717 | INFO     | executing command: cat /etc/os-release
[2025-10-21 19:54:48] 2025-10-21 17:53:54,724 | INFO     | cat /etc/os-release:
[2025-10-21 19:54:48] NAME="CentOS Linux"
[2025-10-21 19:54:48] VERSION="7 (Core)"
[2025-10-21 19:54:48] ID="centos"
[2025-10-21 19:54:48] ID_LIKE="rhel fedora"
[2025-10-21 19:54:48] VERSION_ID="7"
[2025-10-21 19:54:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 19:54:48] ANSI_COLOR="0;31"
[2025-10-21 19:54:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 19:54:48] HOME_URL="https://www.centos.org/"
[2025-10-21 19:54:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 19:54:48] 
[2025-10-21 19:54:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 19:54:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 19:54:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 19:54:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 19:54:48] 
[2025-10-21 19:54:48] 2025-10-21 17:53:54,724 | INFO     | ***************************************
[2025-10-21 19:54:48] 2025-10-21 17:53:55,223 | WARNING  | process 1074050 can no longer be monitored (due to stat problems) - aborting
[2025-10-21 19:54:48] 2025-10-21 17:53:55,225 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/20
[2025-10-21 19:54:48] 2025-10-21 17:53:55,233 | INFO     | sufficient remaining disk space (881897504768 B)
[2025-10-21 19:54:48] 2025-10-21 17:53:55,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 19:54:48] 2025-10-21 17:53:55,233 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 19:54:48] 2025-10-21 17:53:55,233 | INFO     | update_server=False
[2025-10-21 19:54:48] 2025-10-21 17:53:55,233 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 19:54:48] 2025-10-21 17:53:55,233 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 19:54:48] 2025-10-21 17:53:55,244 | INFO     | all data control threads have been joined
[2025-10-21 19:54:48] 2025-10-21 17:53:55,257 | INFO     | using path: /var/lib/boinc-client/slots/20/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 19:54:48] 2025-10-21 17:53:55,299 | INFO     | number of running child processes to parent process 1074050: 1
[2025-10-21 19:54:48] 2025-10-21 17:53:55,300 | INFO     | maximum number of monitored processes: 6
[2025-10-21 19:54:48] 2025-10-21 17:53:55,300 | INFO     | aborting job monitoring since job object (job id=6853514594) has expired
[2025-10-21 19:54:48] 2025-10-21 17:53:55,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 19:54:48] 2025-10-21 17:53:55,300 | INFO     | will abort loop
[2025-10-21 19:54:48] 2025-10-21 17:53:55,508 | INFO     | all payload control threads have been joined
[2025-10-21 19:54:48] 2025-10-21 17:53:55,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 19:54:48] 2025-10-21 17:53:56,236 | INFO     | [job] queue monitor thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:56,237 | INFO     | [job] retrieve thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:56,248 | INFO     | [data] control thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:56,304 | INFO     | [job] job monitor thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:56,513 | INFO     | [payload] control thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:56,604 | INFO     | all job control threads have been joined
[2025-10-21 19:54:48] 2025-10-21 17:53:56,732 | INFO     | [data] copytool_in thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:57,080 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:57,184 | INFO     | [payload] failed_post thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:57,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:57,364 | INFO     | [job] validate thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:57,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 19:54:48] 2025-10-21 17:53:57,484 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:57,508 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:57,564 | INFO     | [payload] validate_post thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:57,608 | INFO     | [job] control thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:53:57,921 | INFO     | [data] copytool_out thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:54:01,373 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 19:54:48] 2025-10-21 17:54:25,458 | INFO     | PID=1067360 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 19:54:48] 2025-10-21 17:54:25,458 | INFO     | .. there are 4 such processes running
[2025-10-21 19:54:48] 2025-10-21 17:54:25,458 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 19:54:48] 2025-10-21 17:54:25,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 19:54:48] 2025-10-21 17:54:25,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 19:54:48] 2025-10-21 17:54:42,360 | INFO     | [monitor] cgroup control has ended
[2025-10-21 19:54:48] 2025-10-21 17:54:43,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713679075136)>', '<ExcThread(monitor, started 139713037973248)>']
[2025-10-21 19:54:48] 2025-10-21 17:54:44,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 19:54:48] 2025-10-21 17:54:44,533 | INFO     | [monitor] control thread has ended
[2025-10-21 19:54:48] 2025-10-21 17:54:48,744 | INFO     | all workflow threads have been joined
[2025-10-21 19:54:48] 2025-10-21 17:54:48,745 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 19:54:48] 2025-10-21 17:54:48,745 | INFO     | traces error code: 0
[2025-10-21 19:54:48] 2025-10-21 17:54:48,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 19:54:48] 2025-10-21 17:54:48,798 [wrapper] ==== pilot stdout END ====
[2025-10-21 19:54:48] 2025-10-21 17:54:48,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 19:54:48] 2025-10-21 17:54:48,800 [wrapper] pilotpid: 1067360
[2025-10-21 19:54:48] 2025-10-21 17:54:48,801 [wrapper] Pilot exit status: 0
[2025-10-21 19:54:48] 2025-10-21 17:54:48,805 [wrapper] pandaids: 6853514594
[2025-10-21 19:54:48] 2025-10-21 17:54:48,820 [wrapper] cleanup supervisor_pilot 1125392 1067361
[2025-10-21 19:54:48] 2025-10-21 17:54:48,821 [wrapper] Test setup, not cleaning
[2025-10-21 19:54:48] 2025-10-21 17:54:48,822 [wrapper] apfmon messages muted
[2025-10-21 19:54:48] 2025-10-21 17:54:48,823 [wrapper] ==== wrapper stdout END ====
[2025-10-21 19:54:48] 2025-10-21 17:54:48,825 [wrapper] ==== wrapper stderr END ====
[2025-10-21 19:54:48]  *** Error codes and diagnostics ***
[2025-10-21 19:54:48]     "exeErrorCode": 0,
[2025-10-21 19:54:48]     "exeErrorDiag": "",
[2025-10-21 19:54:48]     "pilotErrorCode": 0,
[2025-10-21 19:54:48]     "pilotErrorDiag": "",
[2025-10-21 19:54:48]  *** Listing of results directory ***
[2025-10-21 19:54:48] total 337392
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc    557409 Oct 21 08:43 pilot3.tar.gz
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc      5112 Oct 21 08:57 queuedata.json
[2025-10-21 19:54:48] -rwx------ 1 boinc boinc     36292 Oct 21 08:58 runpilot2-wrapper.sh
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc       100 Oct 21 18:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 19:54:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 18:57 run_atlas
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc       105 Oct 21 18:57 job.xml
[2025-10-21 19:54:48] -rw-r--r-- 2 boinc boinc     15120 Oct 21 18:57 start_atlas.sh
[2025-10-21 19:54:48] drwxrwx--x 2 boinc boinc      4096 Oct 21 18:57 shared
[2025-10-21 19:54:48] -rw-r--r-- 2 boinc boinc    569673 Oct 21 18:57 input.tar.gz
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc      6738 Oct 21 18:57 init_data.xml
[2025-10-21 19:54:48] -rw-r--r-- 2 boinc boinc 192578828 Oct 21 18:57 EVNT.46809186._000195.pool.root.1
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc         0 Oct 21 18:57 boinc_lockfile
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc      2492 Oct 21 18:57 pandaJob.out
[2025-10-21 19:54:48] -rw------- 1 boinc boinc    978464 Oct 21 18:57 agis_schedconf.cvmfs.json
[2025-10-21 19:54:48] -rw------- 1 boinc boinc   1560740 Oct 21 18:57 agis_ddmendpoints.agis.ALL.json
[2025-10-21 19:54:48] drwx------ 5 boinc boinc      4096 Oct 21 18:57 pilot3
[2025-10-21 19:54:48] -rw------- 1 boinc boinc 147449397 Oct 21 19:53 HITS.46809188._005079.pool.root.1
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc       529 Oct 21 19:53 boinc_task_state.xml
[2025-10-21 19:54:48] -rw------- 1 boinc boinc      1020 Oct 21 19:53 memory_monitor_summary.json
[2025-10-21 19:54:48] -rw------- 1 boinc boinc    260104 Oct 21 19:53 log.46809188._005079.job.log.tgz.1
[2025-10-21 19:54:48] -rw------- 1 boinc boinc      7752 Oct 21 19:53 heartbeat.json
[2025-10-21 19:54:48] -rw------- 1 boinc boinc        95 Oct 21 19:54 pilot_heartbeat.json
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc      8192 Oct 21 19:54 boinc_mmap_file
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc        27 Oct 21 19:54 wrapper_checkpoint.txt
[2025-10-21 19:54:48] -rw------- 1 boinc boinc      5361 Oct 21 19:54 pilotlog.txt
[2025-10-21 19:54:48] -rw------- 1 boinc boinc    520158 Oct 21 19:54 log.46809188._005079.job.log.1
[2025-10-21 19:54:48] -rw------- 1 boinc boinc       357 Oct 21 19:54 output.list
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc       620 Oct 21 19:54 runtime_log
[2025-10-21 19:54:48] -rw------- 1 boinc boinc    798720 Oct 21 19:54 result.tar.gz
[2025-10-21 19:54:48] -rw------- 1 boinc boinc       654 Oct 21 19:54 TEcNDmAVLV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYn1NDmOFpBPm.diag
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc      8840 Oct 21 19:54 runtime_log.err
[2025-10-21 19:54:48] -rw-r--r-- 1 boinc boinc     21713 Oct 21 19:54 stderr.txt
[2025-10-21 19:54:48] HITS file was successfully produced:
[2025-10-21 19:54:48] -rw------- 1 boinc boinc 147449397 Oct 21 19:53 shared/HITS.pool.root.1
[2025-10-21 19:54:48]  *** Contents of shared directory: ***
[2025-10-21 19:54:48] total 333424
[2025-10-21 19:54:48] -rw-r--r-- 2 boinc boinc     15120 Oct 21 18:57 start_atlas.sh
[2025-10-21 19:54:48] -rw-r--r-- 2 boinc boinc    569673 Oct 21 18:57 input.tar.gz
[2025-10-21 19:54:48] -rw-r--r-- 2 boinc boinc 192578828 Oct 21 18:57 ATLAS.root_0
[2025-10-21 19:54:48] -rw------- 1 boinc boinc 147449397 Oct 21 19:53 HITS.pool.root.1
[2025-10-21 19:54:48] -rw------- 1 boinc boinc    798720 Oct 21 19:54 result.tar.gz
19:54:50 (1063611): run_atlas exited; CPU time 12749.314661
19:54:50 (1063611): called boinc_finish(0)

</stderr_txt>
]]>

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