Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:06:09 (105768): wrapper (7.7.26015): starting
23:06:09 (105768): wrapper: running run_atlas (--nthreads 2)
[2025-10-21 23:06:09] Arguments: --nthreads 2
[2025-10-21 23:06:09] Threads: 2
[2025-10-21 23:06:09] Checking for CVMFS
[2025-10-21 23:06:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 23:06:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 23:06:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 23:06:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 23:06:10] 2.9.2.0 4042113 1152 56764 151970 2 57 28731419 36864000 0 130560 0 680204 99.985 42826 2844 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 23:06:10] CVMFS is ok
[2025-10-21 23:06:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 23:06:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 23:06:10] Further information can be found at the LHC@home message board.
[2025-10-21 23:06:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 23:06:10] Checking for apptainer binary...
[2025-10-21 23:06:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 23:06:10] Running /usr/bin/apptainer --version
[2025-10-21 23:06:10] apptainer version 1.4.1-1.1
[2025-10-21 23:06:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 23:06:10] belleA267a
[2025-10-21 23:06:10] apptainer works
[2025-10-21 23:06:10] Set ATHENA_PROC_NUMBER=2
[2025-10-21 23:06:10] Set ATHENA_CORE_NUMBER=2
[2025-10-21 23:06:10] Starting ATLAS job with PandaID=6853514593
[2025-10-21 23:06:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-22 00:45:37]  *** The last 200 lines of the pilot log: ***
[2025-10-22 00:45:37] ]
[2025-10-22 00:45:37] 2025-10-21 22:44:42,141 | INFO     | transferring file log.46809188._005078.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6853514593/log.46809188._005078.job.log.tgz.1 to /local/data/boinc/
[2025-10-22 00:45:37] 2025-10-21 22:44:42,141 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6853514593/log.46809188._005078.job.log.tgz.1 /local/data/boinc/slots/0/log.46809188._0050
[2025-10-22 00:45:37] 2025-10-21 22:44:42,152 | INFO     | adding to output.list: log.46809188._005078.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/67/log.46809188._005078.job.log.tg
[2025-10-22 00:45:37] 2025-10-21 22:44:42,152 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-22 00:45:37] 2025-10-21 22:44:42,152 | INFO     | summary of transferred files:
[2025-10-22 00:45:37] 2025-10-21 22:44:42,152 | INFO     |  -- lfn=log.46809188._005078.job.log.tgz.1, status_code=0, status=transferred
[2025-10-22 00:45:37] 2025-10-21 22:44:42,153 | INFO     | stage-out finished correctly
[2025-10-22 00:45:37] 2025-10-21 22:44:42,326 | INFO     | monitor loop #455: job 0:6853514593 is in state 'finished'
[2025-10-22 00:45:37] 2025-10-21 22:44:42,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:45:37] 2025-10-21 22:44:42,690 | INFO     | time since job start (5898s) is within the limit (172800.0s)
[2025-10-22 00:45:37] 2025-10-21 22:44:43,738 | INFO     | PID=109472 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-22 00:45:37] 2025-10-21 22:44:44,738 | INFO     | time since job start (5900s) is within the limit (172800.0s)
[2025-10-22 00:45:37] 2025-10-21 22:44:44,830 | INFO     | monitor loop #456: job 0:6853514593 is in state 'finished'
[2025-10-22 00:45:37] 2025-10-21 22:44:44,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:45:37] 2025-10-21 22:44:45,354 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-22 00:45:37] 2025-10-21 22:44:46,549 | INFO     | job 6853514593 has state=finished
[2025-10-22 00:45:37] 2025-10-21 22:44:46,549 | INFO     | preparing for final server update for job 6853514593 in state='finished'
[2025-10-22 00:45:37] 2025-10-21 22:44:46,550 | INFO     | this job has now completed (state=finished)
[2025-10-22 00:45:37] 2025-10-21 22:44:46,550 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-22 00:45:37] 2025-10-21 22:44:46,550 | INFO     | log transfer has been attempted: DONE
[2025-10-22 00:45:37] 2025-10-21 22:44:46,551 | INFO     | job 6853514593 has finished - writing final server update
[2025-10-22 00:45:37] 2025-10-21 22:44:46,551 | INFO     | total number of processed events: 400 (read)
[2025-10-22 00:45:37] 2025-10-21 22:44:46,552 | INFO     | executing command: lscpu
[2025-10-22 00:45:37] 2025-10-21 22:44:46,566 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-22 00:45:37] 2025-10-21 22:44:46,744 | INFO     | time since job start (5902s) is within the limit (172800.0s)
[2025-10-22 00:45:37] 2025-10-21 22:44:47,336 | INFO     | monitor loop #457: job 0:6853514593 is in state 'finished'
[2025-10-22 00:45:37] 2025-10-21 22:44:47,336 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:45:37] 2025-10-21 22:44:48,752 | INFO     | time since job start (5904s) is within the limit (172800.0s)
[2025-10-22 00:45:37] 2025-10-21 22:44:49,839 | INFO     | monitor loop #458: job 0:6853514593 is in state 'finished'
[2025-10-22 00:45:37] 2025-10-21 22:44:49,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:45:37] 2025-10-21 22:44:50,759 | INFO     | time since job start (5906s) is within the limit (172800.0s)
[2025-10-22 00:45:37] 2025-10-21 22:44:50,759 | INFO     | 5907s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-22 00:45:37] 2025-10-21 22:44:52,343 | INFO     | monitor loop #459: job 0:6853514593 is in state 'finished'
[2025-10-22 00:45:37] 2025-10-21 22:44:52,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-22 00:45:37] 2025-10-21 22:44:52,766 | INFO     | time since job start (5908s) is within the limit (172800.0s)
[2025-10-22 00:45:37] 2025-10-21 22:44:53,744 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-22 00:45:37] 2025-10-21 22:44:53,744 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4400.882249999999
[2025-10-22 00:45:37] 2025-10-21 22:44:53,745 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6853514593/memory_monitor_summary.json (trf name=prmon)
[2025-10-22 00:45:37] 2025-10-21 22:44:53,745 | INFO     | extracted standard info from prmon json
[2025-10-22 00:45:37] 2025-10-21 22:44:53,745 | INFO     | extracted standard memory fields from prmon json
[2025-10-22 00:45:37] 2025-10-21 22:44:53,745 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-22 00:45:37] 2025-10-21 22:44:53,745 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-22 00:45:37] 2025-10-21 22:44:53,745 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-22 00:45:37] 2025-10-21 22:44:53,746 | INFO     | fitting pss+swap vs Time
[2025-10-22 00:45:37] 2025-10-21 22:44:53,746 | INFO     | sum of square deviations: 226022842.5
[2025-10-22 00:45:37] 2025-10-21 22:44:53,746 | INFO     | sum of deviations: 156229845.00000003
[2025-10-22 00:45:37] 2025-10-21 22:44:53,746 | INFO     | mean x: 1761083831.5
[2025-10-22 00:45:37] 2025-10-21 22:44:53,746 | INFO     | mean y: 2296317.1333333333
[2025-10-22 00:45:37] 2025-10-21 22:44:53,746 | INFO     | -- intersect: -1214987082.1197803
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | intersect: -1214987082.1197803
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | chi2: 0.02050834075163119
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | -- intersect: -1214987082.1197803
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | current memory leak: 0.69 B/s (using 90 data points, chi2=0.02)
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | could have reported an average CPU frequency of 4524 MHz (7 samples)
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | ..............................
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | . Timing measurements:
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | . get job = 0 s
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | . initial setup = 1 s
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | . payload setup = 6 s
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | . stage-in = 0 s
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | . payload execution = 5867 s
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | . stage-out = 0 s
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | . log creation = 0 s
[2025-10-22 00:45:37] 2025-10-21 22:44:53,747 | INFO     | ..............................
[2025-10-22 00:45:37] 2025-10-21 22:44:54,237 | INFO     | 
[2025-10-22 00:45:37] 2025-10-21 22:44:54,238 | INFO     | job summary report
[2025-10-22 00:45:37] 2025-10-21 22:44:54,238 | INFO     | --------------------------------------------------
[2025-10-22 00:45:37] 2025-10-21 22:44:54,238 | INFO     | PanDA job id: 6853514593
[2025-10-22 00:45:37] 2025-10-21 22:44:54,238 | INFO     | task id: 46809188
[2025-10-22 00:45:37] 2025-10-21 22:44:54,238 | INFO     | errors: (none)
[2025-10-22 00:45:37] 2025-10-21 22:44:54,238 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-22 00:45:37] 2025-10-21 22:44:54,239 | INFO     | pilot state: finished 
[2025-10-22 00:45:37] 2025-10-21 22:44:54,239 | INFO     | transexitcode: 0
[2025-10-22 00:45:37] 2025-10-21 22:44:54,239 | INFO     | exeerrorcode: 0
[2025-10-22 00:45:37] 2025-10-21 22:44:54,239 | INFO     | exeerrordiag: 
[2025-10-22 00:45:37] 2025-10-21 22:44:54,239 | INFO     | exitcode: 0
[2025-10-22 00:45:37] 2025-10-21 22:44:54,239 | INFO     | exitmsg: OK
[2025-10-22 00:45:37] 2025-10-21 22:44:54,239 | INFO     | cpuconsumptiontime: 11382 s
[2025-10-22 00:45:37] 2025-10-21 22:44:54,240 | INFO     | nevents: 400
[2025-10-22 00:45:37] 2025-10-21 22:44:54,240 | INFO     | neventsw: 0
[2025-10-22 00:45:37] 2025-10-21 22:44:54,240 | INFO     | pid: 115883
[2025-10-22 00:45:37] 2025-10-21 22:44:54,240 | INFO     | pgrp: 115883
[2025-10-22 00:45:37] 2025-10-21 22:44:54,240 | INFO     | corecount: 2
[2025-10-22 00:45:37] 2025-10-21 22:44:54,240 | INFO     | event service: False
[2025-10-22 00:45:37] 2025-10-21 22:44:54,240 | INFO     | sizes: {0: 2348841, 7: 2349103, 11: 2349131, 5877: 2375935, 5878: 2375934, 5879: 2384994, 5883: 2385178, 5891: 2385372}
[2025-10-22 00:45:37] 2025-10-21 22:44:54,241 | INFO     | --------------------------------------------------
[2025-10-22 00:45:37] 2025-10-21 22:44:54,241 | INFO     | 
[2025-10-22 00:45:37] 2025-10-21 22:44:54,241 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-22 00:45:37] 2025-10-21 22:44:54,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | job 6853514593 has completed (purged errors)
[2025-10-22 00:45:37] 2025-10-21 22:44:54,253 | INFO     | overall cleanup function is called
[2025-10-22 00:45:37] 2025-10-21 22:44:55,259 | INFO     | --- collectZombieJob: --- 10, [115883]
[2025-10-22 00:45:37] 2025-10-21 22:44:55,260 | INFO     | zombie collector waiting for pid 115883
[2025-10-22 00:45:37] 2025-10-21 22:44:55,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-22 00:45:37] 2025-10-21 22:44:55,261 | INFO     | collected zombie processes
[2025-10-22 00:45:37] 2025-10-21 22:44:55,261 | INFO     | will attempt to kill all subprocesses of pid=115883
[2025-10-22 00:45:37] 2025-10-21 22:44:55,295 | INFO     | process IDs to be killed: [115883] (in reverse order)
[2025-10-22 00:45:37] 2025-10-21 22:44:55,315 | WARNING  | found no corresponding commands to process id(s)
[2025-10-22 00:45:37] 2025-10-21 22:44:55,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-22 00:45:37] 2025-10-21 22:44:55,316 | INFO     | did not find any defunct processes belonging to 115883
[2025-10-22 00:45:37] 2025-10-21 22:44:55,317 | INFO     | did not find any defunct processes belonging to 115883
[2025-10-22 00:45:37] 2025-10-21 22:44:55,317 | INFO     | ready for new job
[2025-10-22 00:45:37] 2025-10-21 22:44:55,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-22 00:45:37] 2025-10-21 22:44:55,317 | INFO     | ***************************************
[2025-10-22 00:45:37] 2025-10-21 22:44:55,317 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-22 00:45:37] 2025-10-21 22:44:55,317 | INFO     | ***************************************
[2025-10-22 00:45:37] 2025-10-21 22:44:55,317 | INFO     | 
[2025-10-22 00:45:37] 2025-10-21 22:44:55,318 | INFO     | architecture information:
[2025-10-22 00:45:37] 2025-10-21 22:44:55,318 | INFO     | executing command: cat /etc/os-release
[2025-10-22 00:45:37] 2025-10-21 22:44:55,325 | INFO     | cat /etc/os-release:
[2025-10-22 00:45:37] NAME="CentOS Linux"
[2025-10-22 00:45:37] VERSION="7 (Core)"
[2025-10-22 00:45:37] ID="centos"
[2025-10-22 00:45:37] ID_LIKE="rhel fedora"
[2025-10-22 00:45:37] VERSION_ID="7"
[2025-10-22 00:45:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-22 00:45:37] ANSI_COLOR="0;31"
[2025-10-22 00:45:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-22 00:45:37] HOME_URL="https://www.centos.org/"
[2025-10-22 00:45:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-22 00:45:37] 
[2025-10-22 00:45:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-22 00:45:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-22 00:45:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-22 00:45:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-22 00:45:37] 
[2025-10-22 00:45:37] 2025-10-21 22:44:55,326 | INFO     | ***************************************
[2025-10-22 00:45:37] 2025-10-21 22:44:55,829 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-22 00:45:37] 2025-10-21 22:44:55,840 | INFO     | sufficient remaining disk space (331810340864 B)
[2025-10-22 00:45:37] 2025-10-21 22:44:55,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-22 00:45:37] 2025-10-21 22:44:55,841 | INFO     | current server update state: UPDATING_FINAL
[2025-10-22 00:45:37] 2025-10-21 22:44:55,841 | INFO     | update_server=False
[2025-10-22 00:45:37] 2025-10-21 22:44:55,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-22 00:45:37] 2025-10-21 22:44:55,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-22 00:45:37] 2025-10-21 22:44:55,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-22 00:45:37] 2025-10-21 22:44:55,853 | INFO     | aborting loop
[2025-10-22 00:45:37] 2025-10-21 22:44:55,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-22 00:45:37] 2025-10-21 22:44:56,192 | INFO     | all job control threads have been joined
[2025-10-22 00:45:37] 2025-10-21 22:44:56,745 | INFO     | all payload control threads have been joined
[2025-10-22 00:45:37] 2025-10-21 22:44:56,846 | INFO     | [job] retrieve thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:56,859 | INFO     | [job] job monitor thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:56,946 | INFO     | all data control threads have been joined
[2025-10-22 00:45:37] 2025-10-21 22:44:57,196 | INFO     | [job] control thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:57,400 | INFO     | [payload] failed_post thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:57,751 | INFO     | [payload] control thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:57,789 | INFO     | [payload] execute_payloads thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:57,847 | INFO     | [data] copytool_out thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:57,902 | INFO     | [data] copytool_in thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:57,912 | INFO     | [payload] validate_post thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:57,952 | INFO     | [data] control thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:58,105 | INFO     | [job] validate thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:58,183 | INFO     | [job] create_data_payload thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:58,183 | INFO     | [payload] validate_pre thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:58,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-22 00:45:37] 2025-10-21 22:44:59,795 | INFO     | [job] queue monitor thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:44:59,902 | INFO     | [data] queue_monitor thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:45:06,570 | INFO     | job.realtimelogging is not enabled
[2025-10-22 00:45:37] 2025-10-21 22:45:07,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-22 00:45:37] 2025-10-21 22:45:25,860 | INFO     | PID=109472 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-22 00:45:37] 2025-10-21 22:45:25,860 | INFO     | found 0 job(s) in 20 queues
[2025-10-22 00:45:37] 2025-10-21 22:45:25,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-22 00:45:37] 2025-10-21 22:45:25,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-22 00:45:37] 2025-10-21 22:45:32,130 | INFO     | [monitor] cgroup control has ended
[2025-10-22 00:45:37] 2025-10-21 22:45:32,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019900131136)>', '<ExcThread(monitor, started 140019398330112)>']
[2025-10-22 00:45:37] 2025-10-21 22:45:32,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-22 00:45:37] 2025-10-21 22:45:32,897 | INFO     | [monitor] control thread has ended
[2025-10-22 00:45:37] 2025-10-21 22:45:37,856 | INFO     | all workflow threads have been joined
[2025-10-22 00:45:37] 2025-10-21 22:45:37,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-22 00:45:37] 2025-10-21 22:45:37,856 | INFO     | traces error code: 0
[2025-10-22 00:45:37] 2025-10-21 22:45:37,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-22 00:45:37] 2025-10-21 22:45:37,896 [wrapper] ==== pilot stdout END ====
[2025-10-22 00:45:37] 2025-10-21 22:45:37,898 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-22 00:45:37] 2025-10-21 22:45:37,900 [wrapper] pilotpid: 109472
[2025-10-22 00:45:37] 2025-10-21 22:45:37,902 [wrapper] Pilot exit status: 0
[2025-10-22 00:45:37] 2025-10-21 22:45:37,908 [wrapper] pandaids: 6853514593
[2025-10-22 00:45:37] 2025-10-21 22:45:37,920 [wrapper] cleanup supervisor_pilot  128482 109473
[2025-10-22 00:45:37] 2025-10-21 22:45:37,922 [wrapper] Test setup, not cleaning
[2025-10-22 00:45:37] 2025-10-21 22:45:37,924 [wrapper] apfmon messages muted
[2025-10-22 00:45:37] 2025-10-21 22:45:37,926 [wrapper] ==== wrapper stdout END ====
[2025-10-22 00:45:37] 2025-10-21 22:45:37,928 [wrapper] ==== wrapper stderr END ====
[2025-10-22 00:45:37]  *** Error codes and diagnostics ***
[2025-10-22 00:45:37]     "exeErrorCode": 0,
[2025-10-22 00:45:37]     "exeErrorDiag": "",
[2025-10-22 00:45:37]     "pilotErrorCode": 0,
[2025-10-22 00:45:37]     "pilotErrorDiag": "",
[2025-10-22 00:45:37]  *** Listing of results directory ***
[2025-10-22 00:45:37] total 339244
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc    557409 Oct 21 08:43 pilot3.tar.gz
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc      5112 Oct 21 08:57 queuedata.json
[2025-10-22 00:45:37] -rwx------ 1 boinc boinc     36292 Oct 21 08:58 runpilot2-wrapper.sh
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc       100 Oct 21 23:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-22 00:45:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 23:06 run_atlas
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc       105 Oct 21 23:06 job.xml
[2025-10-22 00:45:37] -rw-r--r-- 2 boinc boinc 192578828 Oct 21 23:06 EVNT.46809186._000195.pool.root.1
[2025-10-22 00:45:37] -rw-r--r-- 2 boinc boinc    569670 Oct 21 23:06 input.tar.gz
[2025-10-22 00:45:37] -rw-r--r-- 2 boinc boinc     15120 Oct 21 23:06 start_atlas.sh
[2025-10-22 00:45:37] drwxrwx--x 2 boinc boinc      4096 Oct 21 23:06 shared
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc         0 Oct 21 23:06 boinc_setup_complete
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc      6208 Oct 21 23:06 init_data.xml
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc         0 Oct 21 23:06 boinc_lockfile
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc      2492 Oct 21 23:06 pandaJob.out
[2025-10-22 00:45:37] -rw------- 1 boinc boinc    978456 Oct 21 23:06 agis_schedconf.cvmfs.json
[2025-10-22 00:45:37] -rw------- 1 boinc boinc   1560740 Oct 21 23:06 agis_ddmendpoints.agis.ALL.json
[2025-10-22 00:45:37] drwx------ 5 boinc boinc      4096 Oct 21 23:06 pilot3
[2025-10-22 00:45:37] -rw------- 1 boinc boinc 148661988 Oct 22 00:44 HITS.46809188._005078.pool.root.1
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc       530 Oct 22 00:44 boinc_task_state.xml
[2025-10-22 00:45:37] -rw------- 1 boinc boinc      1018 Oct 22 00:44 memory_monitor_summary.json
[2025-10-22 00:45:37] -rw------- 1 boinc boinc    260860 Oct 22 00:44 log.46809188._005078.job.log.tgz.1
[2025-10-22 00:45:37] -rw------- 1 boinc boinc        95 Oct 22 00:44 pilot_heartbeat.json
[2025-10-22 00:45:37] -rw------- 1 boinc boinc      7753 Oct 22 00:44 heartbeat.json
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc        27 Oct 22 00:45 wrapper_checkpoint.txt
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc      8192 Oct 22 00:45 boinc_mmap_file
[2025-10-22 00:45:37] -rw------- 1 boinc boinc      4823 Oct 22 00:45 pilotlog.txt
[2025-10-22 00:45:37] -rw------- 1 boinc boinc    857534 Oct 22 00:45 log.46809188._005078.job.log.1
[2025-10-22 00:45:37] -rw------- 1 boinc boinc       357 Oct 22 00:45 output.list
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc       620 Oct 22 00:45 runtime_log
[2025-10-22 00:45:37] -rw------- 1 boinc boinc   1136640 Oct 22 00:45 result.tar.gz
[2025-10-22 00:45:37] -rw------- 1 boinc boinc       662 Oct 22 00:45 xcaNDmAVLV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXn1NDmXlAOGo.diag
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc      8797 Oct 22 00:45 runtime_log.err
[2025-10-22 00:45:37] -rw-r--r-- 1 boinc boinc     22475 Oct 22 00:45 stderr.txt
[2025-10-22 00:45:37] HITS file was successfully produced:
[2025-10-22 00:45:37] -rw------- 1 boinc boinc 148661988 Oct 22 00:44 shared/HITS.pool.root.1
[2025-10-22 00:45:37]  *** Contents of shared directory: ***
[2025-10-22 00:45:37] total 334944
[2025-10-22 00:45:37] -rw-r--r-- 2 boinc boinc 192578828 Oct 21 23:06 ATLAS.root_0
[2025-10-22 00:45:37] -rw-r--r-- 2 boinc boinc    569670 Oct 21 23:06 input.tar.gz
[2025-10-22 00:45:37] -rw-r--r-- 2 boinc boinc     15120 Oct 21 23:06 start_atlas.sh
[2025-10-22 00:45:37] -rw------- 1 boinc boinc 148661988 Oct 22 00:44 HITS.pool.root.1
[2025-10-22 00:45:37] -rw------- 1 boinc boinc   1136640 Oct 22 00:45 result.tar.gz
00:45:39 (105768): run_atlas exited; CPU time 11405.787339
00:45:39 (105768): called boinc_finish(0)

</stderr_txt>
]]>

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