Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:37:41 (2727198): wrapper (7.7.26015): starting
07:37:41 (2727198): wrapper: running run_atlas (--nthreads 9)
[2025-10-21 07:37:41] Arguments: --nthreads 9
[2025-10-21 07:37:41] Threads: 9
[2025-10-21 07:37:41] Checking for CVMFS
[2025-10-21 07:37:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 07:37:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 07:37:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 07:37:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 07:37:42] 2.13.2.0 5270 18589 103704 151957 1 65 27806395 40960001 20054 16776704 0 60074774 99.884 17214991 39292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-21 07:37:42] CVMFS is ok
[2025-10-21 07:37:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 07:37:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 07:37:42] Further information can be found at the LHC@home message board.
[2025-10-21 07:37:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 07:37:42] Checking for apptainer binary...
[2025-10-21 07:37:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 07:37:42] Running /usr/bin/apptainer --version
[2025-10-21 07:37:42] apptainer version 1.4.3-1.el9
[2025-10-21 07:37:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 07:37:42] c-212-8.aglt2.org
[2025-10-21 07:37:42] apptainer works
[2025-10-21 07:37:42] Set ATHENA_PROC_NUMBER=9
[2025-10-21 07:37:42] Set ATHENA_CORE_NUMBER=9
[2025-10-21 07:37:42] Starting ATLAS job with PandaID=6853383588
[2025-10-21 07:37:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 08:49:18]  *** The last 200 lines of the pilot log: ***
[2025-10-21 08:49:18] 2025-10-21 12:48:26,526 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6853383588/log.46809188._004595.job.log.tgz.1 /tmp/boinchome/slots/4/log.46809188._004595.job
[2025-10-21 08:49:18] 2025-10-21 12:48:26,552 | INFO     | adding to output.list: log.46809188._004595.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/45/log.46809188._004595.job.log.tg
[2025-10-21 08:49:18] 2025-10-21 12:48:26,553 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-21 08:49:18] 2025-10-21 12:48:26,553 | INFO     | summary of transferred files:
[2025-10-21 08:49:18] 2025-10-21 12:48:26,553 | INFO     |  -- lfn=log.46809188._004595.job.log.tgz.1, status_code=0, status=transferred
[2025-10-21 08:49:18] 2025-10-21 12:48:26,554 | INFO     | stage-out finished correctly
[2025-10-21 08:49:18] 2025-10-21 12:48:27,458 | INFO     | time since job start (4227s) is within the limit (172800.0s)
[2025-10-21 08:49:18] 2025-10-21 12:48:28,534 | INFO     | monitor loop #287: job 0:6853383588 is in state 'finished'
[2025-10-21 08:49:18] 2025-10-21 12:48:28,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 08:49:18] 2025-10-21 12:48:29,465 | INFO     | time since job start (4229s) is within the limit (172800.0s)
[2025-10-21 08:49:18] 2025-10-21 12:48:29,577 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-21 08:49:18] 2025-10-21 12:48:31,039 | INFO     | monitor loop #288: job 0:6853383588 is in state 'finished'
[2025-10-21 08:49:18] 2025-10-21 12:48:31,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 08:49:18] 2025-10-21 12:48:31,474 | INFO     | time since job start (4231s) is within the limit (172800.0s)
[2025-10-21 08:49:18] 2025-10-21 12:48:32,253 | INFO     | job 6853383588 has state=finished
[2025-10-21 08:49:18] 2025-10-21 12:48:32,254 | INFO     | preparing for final server update for job 6853383588 in state='finished'
[2025-10-21 08:49:18] 2025-10-21 12:48:32,254 | INFO     | this job has now completed (state=finished)
[2025-10-21 08:49:18] 2025-10-21 12:48:32,254 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-21 08:49:18] 2025-10-21 12:48:32,254 | INFO     | log transfer has been attempted: DONE
[2025-10-21 08:49:18] 2025-10-21 12:48:32,255 | INFO     | job 6853383588 has finished - writing final server update
[2025-10-21 08:49:18] 2025-10-21 12:48:32,255 | INFO     | total number of processed events: 400 (read)
[2025-10-21 08:49:18] 2025-10-21 12:48:32,259 | INFO     | executing command: lscpu
[2025-10-21 08:49:18] 2025-10-21 12:48:32,430 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-21 08:49:18] 2025-10-21 12:48:33,482 | INFO     | time since job start (4233s) is within the limit (172800.0s)
[2025-10-21 08:49:18] 2025-10-21 12:48:33,547 | INFO     | monitor loop #289: job 0:6853383588 is in state 'finished'
[2025-10-21 08:49:18] 2025-10-21 12:48:33,548 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 08:49:18] 2025-10-21 12:48:35,488 | INFO     | time since job start (4235s) is within the limit (172800.0s)
[2025-10-21 08:49:18] 2025-10-21 12:48:36,054 | INFO     | monitor loop #290: job 0:6853383588 is in state 'finished'
[2025-10-21 08:49:18] 2025-10-21 12:48:36,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 08:49:18] 2025-10-21 12:48:37,527 | INFO     | time since job start (4237s) is within the limit (172800.0s)
[2025-10-21 08:49:18] 2025-10-21 12:48:38,557 | INFO     | monitor loop #291: job 0:6853383588 is in state 'finished'
[2025-10-21 08:49:18] 2025-10-21 12:48:38,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 08:49:18] 2025-10-21 12:48:39,205 | INFO     | PID=2730904 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-21 08:49:18] 2025-10-21 12:48:39,212 | INFO     | .. there are 18 such processes running
[2025-10-21 08:49:18] 2025-10-21 12:48:40,217 | INFO     | time since job start (4240s) is within the limit (172800.0s)
[2025-10-21 08:49:18] 2025-10-21 12:48:40,218 | INFO     | 4242s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-21 08:49:18] 2025-10-21 12:48:40,612 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-21 08:49:18] 2025-10-21 12:48:40,618 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2963.8763541666667
[2025-10-21 08:49:18] 2025-10-21 12:48:40,632 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6853383588/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 08:49:18] 2025-10-21 12:48:40,633 | INFO     | extracted standard info from prmon json
[2025-10-21 08:49:18] 2025-10-21 12:48:40,634 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 08:49:18] 2025-10-21 12:48:40,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 08:49:18] 2025-10-21 12:48:40,637 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 08:49:18] 2025-10-21 12:48:40,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 08:49:18] 2025-10-21 12:48:40,639 | INFO     | fitting pss+swap vs Time
[2025-10-21 08:49:18] 2025-10-21 12:48:40,640 | INFO     | sum of square deviations: 73881219.43548375
[2025-10-21 08:49:18] 2025-10-21 12:48:40,640 | INFO     | sum of deviations: -7704049797.403227
[2025-10-21 08:49:18] 2025-10-21 12:48:40,640 | INFO     | mean x: 1761048885.532258
[2025-10-21 08:49:18] 2025-10-21 12:48:40,640 | INFO     | mean y: 2638919.9516129033
[2025-10-21 08:49:18] 2025-10-21 12:48:40,640 | INFO     | -- intersect: 183638052810.88553
[2025-10-21 08:49:18] 2025-10-21 12:48:40,640 | INFO     | intersect: 183638052810.88553
[2025-10-21 08:49:18] 2025-10-21 12:48:40,641 | INFO     | chi2: 0.10252597868221534
[2025-10-21 08:49:18] 2025-10-21 12:48:40,641 | INFO     | -- intersect: 183638052810.88553
[2025-10-21 08:49:18] 2025-10-21 12:48:40,641 | INFO     | current memory leak: -104.28 B/s (using 62 data points, chi2=0.10)
[2025-10-21 08:49:18] 2025-10-21 12:48:40,641 | INFO     | could have reported an average CPU frequency of 2961 MHz (6 samples)
[2025-10-21 08:49:18] 2025-10-21 12:48:40,645 | INFO     | ..............................
[2025-10-21 08:49:18] 2025-10-21 12:48:40,645 | INFO     | . Timing measurements:
[2025-10-21 08:49:18] 2025-10-21 12:48:40,646 | INFO     | . get job = 0 s
[2025-10-21 08:49:18] 2025-10-21 12:48:40,646 | INFO     | . initial setup = 2 s
[2025-10-21 08:49:18] 2025-10-21 12:48:40,646 | INFO     | . payload setup = 11 s
[2025-10-21 08:49:18] 2025-10-21 12:48:40,646 | INFO     | . stage-in = 0 s
[2025-10-21 08:49:18] 2025-10-21 12:48:40,646 | INFO     | . payload execution = 4186 s
[2025-10-21 08:49:18] 2025-10-21 12:48:40,646 | INFO     | . stage-out = 3 s
[2025-10-21 08:49:18] 2025-10-21 12:48:40,646 | INFO     | . log creation = 0 s
[2025-10-21 08:49:18] 2025-10-21 12:48:40,646 | INFO     | ..............................
[2025-10-21 08:49:18] 2025-10-21 12:48:41,001 | INFO     | 
[2025-10-21 08:49:18] 2025-10-21 12:48:41,005 | INFO     | job summary report
[2025-10-21 08:49:18] 2025-10-21 12:48:41,005 | INFO     | --------------------------------------------------
[2025-10-21 08:49:18] 2025-10-21 12:48:41,005 | INFO     | PanDA job id: 6853383588
[2025-10-21 08:49:18] 2025-10-21 12:48:41,005 | INFO     | task id: 46809188
[2025-10-21 08:49:18] 2025-10-21 12:48:41,005 | INFO     | errors: (none)
[2025-10-21 08:49:18] 2025-10-21 12:48:41,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 08:49:18] 2025-10-21 12:48:41,005 | INFO     | pilot state: finished 
[2025-10-21 08:49:18] 2025-10-21 12:48:41,005 | INFO     | transexitcode: 0
[2025-10-21 08:49:18] 2025-10-21 12:48:41,005 | INFO     | exeerrorcode: 0
[2025-10-21 08:49:18] 2025-10-21 12:48:41,005 | INFO     | exeerrordiag: 
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | exitcode: 0
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | exitmsg: OK
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | cpuconsumptiontime: 27251 s
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | nevents: 400
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | neventsw: 0
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | pid: 2738090
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | pgrp: 2738090
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | corecount: 9
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | event service: False
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | sizes: {0: 2348667, 1: 2348866, 10: 2349128, 12: 2349156, 4202: 2375142, 4203: 2375141, 4207: 2384323, 4210: 2384379, 4221: 2384573}
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | --------------------------------------------------
[2025-10-21 08:49:18] 2025-10-21 12:48:41,006 | INFO     | 
[2025-10-21 08:49:18] 2025-10-21 12:48:41,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-21 08:49:18] 2025-10-21 12:48:41,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 08:49:18] 2025-10-21 12:48:41,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,070 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 08:49:18] 2025-10-21 12:48:41,070 | INFO     | job 6853383588 has completed (purged errors)
[2025-10-21 08:49:18] 2025-10-21 12:48:41,070 | INFO     | overall cleanup function is called
[2025-10-21 08:49:18] 2025-10-21 12:48:42,083 | INFO     | --- collectZombieJob: --- 10, [2738090]
[2025-10-21 08:49:18] 2025-10-21 12:48:42,084 | INFO     | zombie collector waiting for pid 2738090
[2025-10-21 08:49:18] 2025-10-21 12:48:42,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 08:49:18] 2025-10-21 12:48:42,084 | INFO     | collected zombie processes
[2025-10-21 08:49:18] 2025-10-21 12:48:42,084 | INFO     | will attempt to kill all subprocesses of pid=2738090
[2025-10-21 08:49:18] 2025-10-21 12:48:42,918 | INFO     | process IDs to be killed: [2738090] (in reverse order)
[2025-10-21 08:49:18] 2025-10-21 12:48:43,160 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 08:49:18] 2025-10-21 12:48:43,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 08:49:18] 2025-10-21 12:48:43,179 | INFO     | did not find any defunct processes belonging to 2738090
[2025-10-21 08:49:18] 2025-10-21 12:48:43,200 | INFO     | did not find any defunct processes belonging to 2738090
[2025-10-21 08:49:18] 2025-10-21 12:48:43,200 | INFO     | ready for new job
[2025-10-21 08:49:18] 2025-10-21 12:48:43,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 08:49:18] 2025-10-21 12:48:43,203 | INFO     | ***************************************
[2025-10-21 08:49:18] 2025-10-21 12:48:43,203 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 08:49:18] 2025-10-21 12:48:43,203 | INFO     | ***************************************
[2025-10-21 08:49:18] 2025-10-21 12:48:43,203 | INFO     | 
[2025-10-21 08:49:18] 2025-10-21 12:48:43,213 | INFO     | architecture information:
[2025-10-21 08:49:18] 2025-10-21 12:48:43,222 | INFO     | executing command: cat /etc/os-release
[2025-10-21 08:49:18] 2025-10-21 12:48:43,361 | INFO     | cat /etc/os-release:
[2025-10-21 08:49:18] NAME="CentOS Linux"
[2025-10-21 08:49:18] VERSION="7 (Core)"
[2025-10-21 08:49:18] ID="centos"
[2025-10-21 08:49:18] ID_LIKE="rhel fedora"
[2025-10-21 08:49:18] VERSION_ID="7"
[2025-10-21 08:49:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 08:49:18] ANSI_COLOR="0;31"
[2025-10-21 08:49:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 08:49:18] HOME_URL="https://www.centos.org/"
[2025-10-21 08:49:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 08:49:18] 
[2025-10-21 08:49:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 08:49:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 08:49:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 08:49:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 08:49:18] 
[2025-10-21 08:49:18] 2025-10-21 12:48:43,361 | INFO     | ***************************************
[2025-10-21 08:49:18] 2025-10-21 12:48:43,865 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-21 08:49:18] 2025-10-21 12:48:44,026 | INFO     | sufficient remaining disk space (127568707584 B)
[2025-10-21 08:49:18] 2025-10-21 12:48:44,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 08:49:18] 2025-10-21 12:48:44,027 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 08:49:18] 2025-10-21 12:48:44,027 | INFO     | update_server=False
[2025-10-21 08:49:18] 2025-10-21 12:48:44,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 08:49:18] 2025-10-21 12:48:44,041 | INFO     | all payload control threads have been joined
[2025-10-21 08:49:18] 2025-10-21 12:48:44,280 | INFO     | all data control threads have been joined
[2025-10-21 08:49:18] 2025-10-21 12:48:44,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 08:49:18] 2025-10-21 12:48:44,572 | INFO     | aborting loop
[2025-10-21 08:49:18] 2025-10-21 12:48:44,743 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 08:49:18] 2025-10-21 12:48:44,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 08:49:18] 2025-10-21 12:48:45,044 | INFO     | [job] retrieve thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:45,046 | INFO     | [payload] control thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:45,287 | INFO     | [data] control thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:45,340 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:45,352 | INFO     | [payload] validate_post thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:45,354 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:45,465 | INFO     | all job control threads have been joined
[2025-10-21 08:49:18] 2025-10-21 12:48:45,471 | INFO     | [payload] failed_post thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:45,577 | INFO     | [job] job monitor thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:45,688 | INFO     | [job] validate thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:45,691 | INFO     | [data] copytool_in thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:45,731 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:46,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 08:49:18] 2025-10-21 12:48:46,117 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:46,472 | INFO     | [job] control thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:46,750 | INFO     | [data] copytool_out thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:47,023 | INFO     | [job] queue monitor thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:48:48,915 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 08:49:18] 2025-10-21 12:49:07,627 | INFO     | [monitor] cgroup control has ended
[2025-10-21 08:49:18] 2025-10-21 12:49:07,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413631870784)>', '<ExcThread(monitor, started 140413109249792)>']
[2025-10-21 08:49:18] 2025-10-21 12:49:12,732 | INFO     | all workflow threads have been joined
[2025-10-21 08:49:18] 2025-10-21 12:49:12,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 08:49:18] 2025-10-21 12:49:12,735 | INFO     | traces error code: 0
[2025-10-21 08:49:18] 2025-10-21 12:49:12,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 08:49:18] 2025-10-21 12:49:17,137 | INFO     | PID=2730904 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 08:49:18] 2025-10-21 12:49:17,138 | INFO     | .. there are 18 such processes running
[2025-10-21 08:49:18] 2025-10-21 12:49:17,138 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 08:49:18] 2025-10-21 12:49:17,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 08:49:18] 2025-10-21 12:49:17,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 08:49:18] 2025-10-21 12:49:17,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 08:49:18] 2025-10-21 12:49:17,138 | INFO     | [monitor] control thread has ended
[2025-10-21 08:49:18] 2025-10-21 12:49:17,919 [wrapper] ==== pilot stdout END ====
[2025-10-21 08:49:18] 2025-10-21 12:49:17,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 08:49:18] 2025-10-21 12:49:17,927 [wrapper] pilotpid: 2730904
[2025-10-21 08:49:18] 2025-10-21 12:49:17,929 [wrapper] Pilot exit status: 0
[2025-10-21 08:49:18] 2025-10-21 12:49:17,978 [wrapper] pandaids: 6853383588
[2025-10-21 08:49:18] 2025-10-21 12:49:18,102 [wrapper] cleanup supervisor_pilot 2889237 2730905
[2025-10-21 08:49:18] 2025-10-21 12:49:18,107 [wrapper] Test setup, not cleaning
[2025-10-21 08:49:18] 2025-10-21 12:49:18,116 [wrapper] apfmon messages muted
[2025-10-21 08:49:18] 2025-10-21 12:49:18,120 [wrapper] ==== wrapper stdout END ====
[2025-10-21 08:49:18] 2025-10-21 12:49:18,123 [wrapper] ==== wrapper stderr END ====
[2025-10-21 08:49:18]  *** Error codes and diagnostics ***
[2025-10-21 08:49:18]     "exeErrorCode": 0,
[2025-10-21 08:49:18]     "exeErrorDiag": "",
[2025-10-21 08:49:18]     "pilotErrorCode": 0,
[2025-10-21 08:49:18]     "pilotErrorDiag": "",
[2025-10-21 08:49:18]  *** Listing of results directory ***
[2025-10-21 08:49:18] total 332992
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 23:49 pilot3.tar.gz
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 21 00:14 queuedata.json
[2025-10-21 08:49:18] -rwx------. 1 boincer umatlas     36292 Oct 21 00:15 runpilot2-wrapper.sh
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas       100 Oct 21 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 08:49:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 07:37 run_atlas
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas       105 Oct 21 07:37 job.xml
[2025-10-21 08:49:18] -rw-r--r--. 2 boincer umatlas 187812448 Oct 21 07:37 EVNT.46809186._000176.pool.root.1
[2025-10-21 08:49:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 07:37 start_atlas.sh
[2025-10-21 08:49:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 07:37 shared
[2025-10-21 08:49:18] -rw-r--r--. 2 boincer umatlas    569673 Oct 21 07:37 input.tar.gz
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas         0 Oct 21 07:37 boinc_lockfile
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas      2492 Oct 21 07:37 pandaJob.out
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas    978838 Oct 21 07:37 agis_schedconf.cvmfs.json
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas   1560740 Oct 21 07:37 agis_ddmendpoints.agis.ALL.json
[2025-10-21 08:49:18] drwx------. 5 boincer umatlas      4096 Oct 21 07:38 pilot3
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas      6945 Oct 21 08:46 init_data.xml
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas 147396179 Oct 21 08:47 HITS.46809188._004595.pool.root.1
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas       530 Oct 21 08:47 boinc_task_state.xml
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas      1039 Oct 21 08:48 memory_monitor_summary.json
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas        95 Oct 21 08:48 pilot_heartbeat.json
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas    341736 Oct 21 08:48 log.46809188._004595.job.log.tgz.1
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas      7783 Oct 21 08:48 heartbeat.json
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas       823 Oct 21 08:49 pilotlog.txt
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 08:49 boinc_mmap_file
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas        27 Oct 21 08:49 wrapper_checkpoint.txt
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas    602081 Oct 21 08:49 log.46809188._004595.job.log.1
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas       357 Oct 21 08:49 output.list
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas       620 Oct 21 08:49 runtime_log
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas    962560 Oct 21 08:49 result.tar.gz
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas      8698 Oct 21 08:49 runtime_log.err
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas       654 Oct 21 08:49 kfrMDm5xIV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9O1NDmfrvOEn.diag
[2025-10-21 08:49:18] -rw-r--r--. 1 boincer umatlas     12288 Oct 21 08:49 stderr.txt
[2025-10-21 08:49:18] HITS file was successfully produced:
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas 147396179 Oct 21 08:47 shared/HITS.pool.root.1
[2025-10-21 08:49:18]  *** Contents of shared directory: ***
[2025-10-21 08:49:18] total 328880
[2025-10-21 08:49:18] -rw-r--r--. 2 boincer umatlas 187812448 Oct 21 07:37 ATLAS.root_0
[2025-10-21 08:49:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 07:37 start_atlas.sh
[2025-10-21 08:49:18] -rw-r--r--. 2 boincer umatlas    569673 Oct 21 07:37 input.tar.gz
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas 147396179 Oct 21 08:47 HITS.pool.root.1
[2025-10-21 08:49:18] -rw-------. 1 boincer umatlas    962560 Oct 21 08:49 result.tar.gz
08:49:19 (2727198): run_atlas exited; CPU time 27361.248040
08:49:19 (2727198): called boinc_finish(0)

</stderr_txt>
]]>

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