Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:16:27 (1086984): wrapper (7.7.26015): starting
20:16:27 (1086984): wrapper: running run_atlas (--nthreads 3)
[2025-10-21 20:16:27] Arguments: --nthreads 3
[2025-10-21 20:16:27] Threads: 3
[2025-10-21 20:16:27] Checking for CVMFS
[2025-10-21 20:16:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 20:16:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 20:16:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 20:16:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 20:16:27] 2.9.2.0 788955 1012 75596 151968 1 56 31240790 36864000 0 130560 0 788119 99.988 41142 2546 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 20:16:27] CVMFS is ok
[2025-10-21 20:16:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 20:16:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 20:16:27] Further information can be found at the LHC@home message board.
[2025-10-21 20:16:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 20:16:27] Checking for apptainer binary...
[2025-10-21 20:16:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 20:16:27] Running /usr/bin/apptainer --version
[2025-10-21 20:16:27] apptainer version 1.4.1-1.1
[2025-10-21 20:16:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 20:16:27] magicA161
[2025-10-21 20:16:27] apptainer works
[2025-10-21 20:16:27] Set ATHENA_PROC_NUMBER=3
[2025-10-21 20:16:27] Set ATHENA_CORE_NUMBER=3
[2025-10-21 20:16:27] Starting ATLAS job with PandaID=6852989346
[2025-10-21 20:16:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 21:45:46]  *** The last 200 lines of the pilot log: ***
[2025-10-21 21:45:46] 2025-10-21 19:44:59,304 | INFO     | [payload] failed_post thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:44:59,332 | INFO     | [data] control thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:44:59,332 | INFO     | [job] validate thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:44:59,489 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:44:59,489 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:44:59,610 | INFO     | [payload] control thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:44:59,616 | INFO     | [data] copytool_out thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:44:59,735 | INFO     | [job] control thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:44:59,847 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:45:01,618 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:45:07,748 | INFO     | job.realtimelogging is not enabled
[2025-10-21 21:45:46] 2025-10-21 19:45:08,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 21:45:46] 2025-10-21 19:45:27,682 | INFO     | PID=1090700 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 21:45:46] 2025-10-21 19:45:27,683 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 21:45:46] 2025-10-21 19:45:27,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 21:45:46] 2025-10-21 19:45:27,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 21:45:46] 2025-10-21 19:45:39,988 | INFO     | [monitor] cgroup control has ended
[2025-10-21 21:45:46] 2025-10-21 19:45:41,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140085646464832)>', '<ExcThread(monitor, started 140084695254784)>']
[2025-10-21 21:45:46] 2025-10-21 19:45:41,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 21:45:46] 2025-10-21 19:45:41,757 | INFO     | [monitor] control thread has ended
[2025-10-21 21:45:46] 2025-10-21 19:45:46,481 | INFO     | all workflow threads have been joined
[2025-10-21 21:45:46] 2025-10-21 19:45:46,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 21:45:46] 2025-10-21 19:45:46,481 | INFO     | traces error code: 0
[2025-10-21 21:45:46] 2025-10-21 19:45:46,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 21:45:46] 2025-10-21 19:45:46,531 [wrapper] ==== pilot stdout END ====
[2025-10-21 21:45:46] 2025-10-21 19:45:46,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 21:45:46] 2025-10-21 19:45:46,536 [wrapper] pilotpid: 1090700
[2025-10-21 21:45:46] 2025-10-21 19:45:46,539 [wrapper] Pilot exit status: 0
[2025-10-21 21:45:46] 2025-10-21 19:45:46,546 [wrapper] pandaids: 6852989346
[2025-10-21 21:45:46] 2025-10-21 19:45:46,564 [wrapper] cleanup supervisor_pilot 1109184 1090701
[2025-10-21 21:45:46] 2025-10-21 19:45:46,567 [wrapper] Test setup, not cleaning
[2025-10-21 21:45:46] 2025-10-21 19:45:46,569 [wrapper] apfmon messages muted
[2025-10-21 21:45:46] 2025-10-21 19:45:46,572 [wrapper] ==== wrapper stdout END ====
[2025-10-21 21:45:46] 2025-10-21 19:45:46,574 [wrapper] ==== wrapper stderr END ====
[2025-10-21 21:45:46]  *** Error codes and diagnostics ***
[2025-10-21 21:45:46]     "exeErrorCode": 0,
[2025-10-21 21:45:46]     "exeErrorDiag": "",
[2025-10-21 21:45:46]     "pilotErrorCode": 0,
[2025-10-21 21:45:46]     "pilotErrorDiag": "",
[2025-10-21 21:45:46]  *** Listing of results directory ***
[2025-10-21 21:45:46] total 429908
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc    557409 Oct 21 08:00 pilot3.tar.gz
[2025-10-21 21:45:46] -rwx------ 1 boinc boinc     36292 Oct 21 08:12 runpilot2-wrapper.sh
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc      5112 Oct 21 08:12 queuedata.json
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc       100 Oct 21 20:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 21:45:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 20:16 run_atlas
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc       105 Oct 21 20:16 job.xml
[2025-10-21 21:45:46] -rw-r--r-- 2 boinc boinc 227499884 Oct 21 20:16 EVNT.46771634._002481.pool.root.1
[2025-10-21 21:45:46] -rw-r--r-- 2 boinc boinc    569676 Oct 21 20:16 input.tar.gz
[2025-10-21 21:45:46] -rw-r--r-- 2 boinc boinc     15120 Oct 21 20:16 start_atlas.sh
[2025-10-21 21:45:46] drwxrwx--x 2 boinc boinc      4096 Oct 21 20:16 shared
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc         0 Oct 21 20:16 boinc_setup_complete
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc      6449 Oct 21 20:16 init_data.xml
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc         0 Oct 21 20:16 boinc_lockfile
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc      2559 Oct 21 20:16 pandaJob.out
[2025-10-21 21:45:46] -rw------- 1 boinc boinc    978456 Oct 21 20:16 agis_schedconf.cvmfs.json
[2025-10-21 21:45:46] -rw------- 1 boinc boinc   1560740 Oct 21 20:16 agis_ddmendpoints.agis.ALL.json
[2025-10-21 21:45:46] drwx------ 5 boinc boinc      4096 Oct 21 20:16 pilot3
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc       529 Oct 21 21:44 boinc_task_state.xml
[2025-10-21 21:45:46] -rw------- 1 boinc boinc 206788846 Oct 21 21:44 HITS.46771637._062866.pool.root.1
[2025-10-21 21:45:46] -rw------- 1 boinc boinc      1017 Oct 21 21:44 memory_monitor_summary.json
[2025-10-21 21:45:46] -rw------- 1 boinc boinc    247646 Oct 21 21:44 log.46771637._062866.job.log.tgz.1
[2025-10-21 21:45:46] -rw------- 1 boinc boinc      7755 Oct 21 21:44 heartbeat.json
[2025-10-21 21:45:46] -rw------- 1 boinc boinc        95 Oct 21 21:45 pilot_heartbeat.json
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc      8192 Oct 21 21:45 boinc_mmap_file
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc        27 Oct 21 21:45 wrapper_checkpoint.txt
[2025-10-21 21:45:46] -rw------- 1 boinc boinc      5010 Oct 21 21:45 pilotlog.txt
[2025-10-21 21:45:46] -rw------- 1 boinc boinc    774661 Oct 21 21:45 log.46771637._062866.job.log.1
[2025-10-21 21:45:46] -rw------- 1 boinc boinc       357 Oct 21 21:45 output.list
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc       620 Oct 21 21:45 runtime_log
[2025-10-21 21:45:46] -rw------- 1 boinc boinc   1044480 Oct 21 21:45 result.tar.gz
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc      8792 Oct 21 21:45 runtime_log.err
[2025-10-21 21:45:46] -rw------- 1 boinc boinc       661 Oct 21 21:45 FSMLDmymKV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNf1NDmF0IILn.diag
[2025-10-21 21:45:46] -rw-r--r-- 1 boinc boinc      5902 Oct 21 21:45 stderr.txt
[2025-10-21 21:45:46] HITS file was successfully produced:
[2025-10-21 21:45:46] -rw------- 1 boinc boinc 206788846 Oct 21 21:44 shared/HITS.pool.root.1
[2025-10-21 21:45:46]  *** Contents of shared directory: ***
[2025-10-21 21:45:46] total 425716
[2025-10-21 21:45:46] -rw-r--r-- 2 boinc boinc 227499884 Oct 21 20:16 ATLAS.root_0
[2025-10-21 21:45:46] -rw-r--r-- 2 boinc boinc    569676 Oct 21 20:16 input.tar.gz
[2025-10-21 21:45:46] -rw-r--r-- 2 boinc boinc     15120 Oct 21 20:16 start_atlas.sh
[2025-10-21 21:45:46] -rw------- 1 boinc boinc 206788846 Oct 21 21:44 HITS.pool.root.1
[2025-10-21 21:45:46] -rw------- 1 boinc boinc   1044480 Oct 21 21:45 result.tar.gz
21:45:47 (1086984): run_atlas exited; CPU time 15210.562674
21:45:47 (1086984): called boinc_finish(0)

</stderr_txt>
]]>

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