Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:54:20 (309944): wrapper (7.7.26015): starting
21:54:20 (309944): wrapper: running run_atlas (--nthreads 3)
[2025-10-21 21:54:20] Arguments: --nthreads 3
[2025-10-21 21:54:20] Threads: 3
[2025-10-21 21:54:20] Checking for CVMFS
[2025-10-21 21:54:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 21:54:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 21:54:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 21:54:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 21:54:20] 2.9.2.0 4130834 1229 75920 151969 1 57 31988881 36864000 0 130560 0 989725 99.989 45776 2028 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 21:54:20] CVMFS is ok
[2025-10-21 21:54:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 21:54:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 21:54:20] Further information can be found at the LHC@home message board.
[2025-10-21 21:54:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 21:54:20] Checking for apptainer binary...
[2025-10-21 21:54:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 21:54:20] Running /usr/bin/apptainer --version
[2025-10-21 21:54:20] apptainer version 1.4.1-1.1
[2025-10-21 21:54:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 21:54:20] magicA161a
[2025-10-21 21:54:20] apptainer works
[2025-10-21 21:54:20] Set ATHENA_PROC_NUMBER=3
[2025-10-21 21:54:20] Set ATHENA_CORE_NUMBER=3
[2025-10-21 21:54:20] Starting ATLAS job with PandaID=6852949834
[2025-10-21 21:54:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 23:19:37]  *** The last 200 lines of the pilot log: ***
[2025-10-21 23:19:37] 2025-10-21 21:18:50,208 | INFO     | [payload] validate_post thread has finished
[2025-10-21 23:19:37] 2025-10-21 21:18:50,448 | INFO     | [job] job monitor thread has finished
[2025-10-21 23:19:37] 2025-10-21 21:18:50,469 | INFO     | [data] copytool_out thread has finished
[2025-10-21 23:19:37] 2025-10-21 21:18:50,535 | INFO     | [payload] failed_post thread has finished
[2025-10-21 23:19:37] 2025-10-21 21:18:50,630 | INFO     | [job] validate thread has finished
[2025-10-21 23:19:37] 2025-10-21 21:18:50,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 23:19:37] 2025-10-21 21:18:50,759 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 23:19:37] 2025-10-21 21:18:50,770 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 23:19:37] 2025-10-21 21:18:50,882 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 23:19:37] 2025-10-21 21:18:54,665 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 23:19:37] 2025-10-21 21:18:58,880 | INFO     | job.realtimelogging is not enabled
[2025-10-21 23:19:37] 2025-10-21 21:18:59,886 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 23:19:37] 2025-10-21 21:19:18,223 | INFO     | PID=313660 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 23:19:37] 2025-10-21 21:19:18,223 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 23:19:37] 2025-10-21 21:19:18,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 23:19:37] 2025-10-21 21:19:18,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 23:19:37] 2025-10-21 21:19:31,344 | INFO     | [monitor] cgroup control has ended
[2025-10-21 23:19:37] 2025-10-21 21:19:32,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852412548928)>', '<ExcThread(monitor, started 139851609384704)>']
[2025-10-21 23:19:37] 2025-10-21 21:19:32,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 23:19:37] 2025-10-21 21:19:32,295 | INFO     | [monitor] control thread has ended
[2025-10-21 23:19:37] 2025-10-21 21:19:37,030 | INFO     | all workflow threads have been joined
[2025-10-21 23:19:37] 2025-10-21 21:19:37,031 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 23:19:37] 2025-10-21 21:19:37,031 | INFO     | traces error code: 0
[2025-10-21 23:19:37] 2025-10-21 21:19:37,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 23:19:37] 2025-10-21 21:19:37,081 [wrapper] ==== pilot stdout END ====
[2025-10-21 23:19:37] 2025-10-21 21:19:37,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 23:19:37] 2025-10-21 21:19:37,086 [wrapper] pilotpid: 313660
[2025-10-21 23:19:37] 2025-10-21 21:19:37,088 [wrapper] Pilot exit status: 0
[2025-10-21 23:19:37] 2025-10-21 21:19:37,095 [wrapper] pandaids: 6852949834
[2025-10-21 23:19:37] 2025-10-21 21:19:37,111 [wrapper] cleanup supervisor_pilot  332563 313661
[2025-10-21 23:19:37] 2025-10-21 21:19:37,113 [wrapper] Test setup, not cleaning
[2025-10-21 23:19:37] 2025-10-21 21:19:37,116 [wrapper] apfmon messages muted
[2025-10-21 23:19:37] 2025-10-21 21:19:37,118 [wrapper] ==== wrapper stdout END ====
[2025-10-21 23:19:37] 2025-10-21 21:19:37,120 [wrapper] ==== wrapper stderr END ====
[2025-10-21 23:19:37]  *** Error codes and diagnostics ***
[2025-10-21 23:19:37]     "exeErrorCode": 0,
[2025-10-21 23:19:37]     "exeErrorDiag": "",
[2025-10-21 23:19:37]     "pilotErrorCode": 0,
[2025-10-21 23:19:37]     "pilotErrorDiag": "",
[2025-10-21 23:19:37]  *** Listing of results directory ***
[2025-10-21 23:19:37] total 424976
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc    557409 Oct 21 00:52 pilot3.tar.gz
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc      5112 Oct 21 01:33 queuedata.json
[2025-10-21 23:19:37] -rwx------ 1 boinc boinc     36292 Oct 21 01:36 runpilot2-wrapper.sh
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc       100 Oct 21 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 23:19:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 21:54 run_atlas
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc       105 Oct 21 21:54 job.xml
[2025-10-21 23:19:37] -rw-r--r-- 2 boinc boinc 229735495 Oct 21 21:54 EVNT.46771634._002179.pool.root.1
[2025-10-21 23:19:37] drwxrwx--x 2 boinc boinc      4096 Oct 21 21:54 shared
[2025-10-21 23:19:37] -rw-r--r-- 2 boinc boinc    569677 Oct 21 21:54 input.tar.gz
[2025-10-21 23:19:37] -rw-r--r-- 2 boinc boinc     15120 Oct 21 21:54 start_atlas.sh
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc         0 Oct 21 21:54 boinc_setup_complete
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc      6448 Oct 21 21:54 init_data.xml
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc         0 Oct 21 21:54 boinc_lockfile
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc      2559 Oct 21 21:54 pandaJob.out
[2025-10-21 23:19:37] -rw------- 1 boinc boinc    978448 Oct 21 21:54 agis_schedconf.cvmfs.json
[2025-10-21 23:19:37] -rw------- 1 boinc boinc   1560740 Oct 21 21:54 agis_ddmendpoints.agis.ALL.json
[2025-10-21 23:19:37] drwx------ 5 boinc boinc      4096 Oct 21 21:54 pilot3
[2025-10-21 23:19:37] -rw------- 1 boinc boinc 199516923 Oct 21 23:18 HITS.46771637._055607.pool.root.1
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc       529 Oct 21 23:18 boinc_task_state.xml
[2025-10-21 23:19:37] -rw------- 1 boinc boinc      1018 Oct 21 23:18 memory_monitor_summary.json
[2025-10-21 23:19:37] -rw------- 1 boinc boinc    271552 Oct 21 23:18 log.46771637._055607.job.log.tgz.1
[2025-10-21 23:19:37] -rw------- 1 boinc boinc      7764 Oct 21 23:18 heartbeat.json
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc      8192 Oct 21 23:19 boinc_mmap_file
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc        27 Oct 21 23:19 wrapper_checkpoint.txt
[2025-10-21 23:19:37] -rw------- 1 boinc boinc        95 Oct 21 23:19 pilot_heartbeat.json
[2025-10-21 23:19:37] -rw------- 1 boinc boinc      4823 Oct 21 23:19 pilotlog.txt
[2025-10-21 23:19:37] -rw------- 1 boinc boinc    741837 Oct 21 23:19 log.46771637._055607.job.log.1
[2025-10-21 23:19:37] -rw------- 1 boinc boinc       357 Oct 21 23:19 output.list
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc       620 Oct 21 23:19 runtime_log
[2025-10-21 23:19:37] -rw------- 1 boinc boinc   1034240 Oct 21 23:19 result.tar.gz
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc      8797 Oct 21 23:19 runtime_log.err
[2025-10-21 23:19:37] -rw------- 1 boinc boinc       662 Oct 21 23:19 JDYNDmIbEV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmU8zNDm9LJ2Bo.diag
[2025-10-21 23:19:37] -rw-r--r-- 1 boinc boinc      5949 Oct 21 23:19 stderr.txt
[2025-10-21 23:19:37] HITS file was successfully produced:
[2025-10-21 23:19:37] -rw------- 1 boinc boinc 199516923 Oct 21 23:18 shared/HITS.pool.root.1
[2025-10-21 23:19:37]  *** Contents of shared directory: ***
[2025-10-21 23:19:37] total 420792
[2025-10-21 23:19:37] -rw-r--r-- 2 boinc boinc 229735495 Oct 21 21:54 ATLAS.root_0
[2025-10-21 23:19:37] -rw-r--r-- 2 boinc boinc    569677 Oct 21 21:54 input.tar.gz
[2025-10-21 23:19:37] -rw-r--r-- 2 boinc boinc     15120 Oct 21 21:54 start_atlas.sh
[2025-10-21 23:19:37] -rw------- 1 boinc boinc 199516923 Oct 21 23:18 HITS.pool.root.1
[2025-10-21 23:19:37] -rw------- 1 boinc boinc   1034240 Oct 21 23:19 result.tar.gz
23:19:38 (309944): run_atlas exited; CPU time 14438.705847
23:19:38 (309944): called boinc_finish(0)

</stderr_txt>
]]>

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