Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:36:09 (12450): wrapper (7.7.26015): starting
06:36:09 (12450): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 06:36:09] Arguments: --nthreads 8
[2025-10-21 06:36:09] Threads: 8
[2025-10-21 06:36:09] Checking for CVMFS
[2025-10-21 06:36:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 06:36:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 06:36:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 06:36:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 06:36:09] 2.11.2.0 3026 26658 81056 151955 3 58 12893212 20275201 1 130560 0 14975712 99.981 1195941 37058 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-21 06:36:09] CVMFS is ok
[2025-10-21 06:36:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 06:36:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 06:36:09] Further information can be found at the LHC@home message board.
[2025-10-21 06:36:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 06:36:09] Checking for apptainer binary...
[2025-10-21 06:36:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 06:36:09] Running /usr/bin/apptainer --version
[2025-10-21 06:36:09] apptainer version 1.3.2-1.el7
[2025-10-21 06:36:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 06:36:11] c-204-25.aglt2.org
[2025-10-21 06:36:11] apptainer works
[2025-10-21 06:36:11] Set ATHENA_PROC_NUMBER=8
[2025-10-21 06:36:11] Set ATHENA_CORE_NUMBER=8
[2025-10-21 06:36:11] Starting ATLAS job with PandaID=6852987714
[2025-10-21 06:36:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 08:59:49]  *** The last 200 lines of the pilot log: ***
[2025-10-21 08:59:49] 2025-10-21 12:58:49,329 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 08:59:49] 2025-10-21 12:58:49,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 08:59:49] 2025-10-21 12:58:49,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 08:59:49] 2025-10-21 12:58:49,330 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 08:59:49] 2025-10-21 12:58:49,333 | INFO     | fitting pss+swap vs Time
[2025-10-21 08:59:49] 2025-10-21 12:58:49,333 | INFO     | sum of square deviations: 850825255.0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,334 | INFO     | sum of deviations: -8101463283.499999
[2025-10-21 08:59:49] 2025-10-21 12:58:49,334 | INFO     | mean x: 1761047259.5
[2025-10-21 08:59:49] 2025-10-21 12:58:49,334 | INFO     | mean y: 2503867.1214285716
[2025-10-21 08:59:49] 2025-10-21 12:58:49,334 | INFO     | -- intersect: 16770999665.17757
[2025-10-21 08:59:49] 2025-10-21 12:58:49,335 | INFO     | intersect: 16770999665.17757
[2025-10-21 08:59:49] 2025-10-21 12:58:49,335 | INFO     | chi2: 2.290888691666708
[2025-10-21 08:59:49] 2025-10-21 12:58:49,335 | INFO     | sum of square deviations: 762879420.0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,336 | INFO     | sum of deviations: 1360963252.9999976
[2025-10-21 08:59:49] 2025-10-21 12:58:49,336 | INFO     | mean x: 1761047107.0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,336 | INFO     | mean y: 2519811.7333333334
[2025-10-21 08:59:49] 2025-10-21 12:58:49,336 | INFO     | -- intersect: -3139156758.109061
[2025-10-21 08:59:49] 2025-10-21 12:58:49,336 | INFO     | intersect: -3139156758.109061
[2025-10-21 08:59:49] 2025-10-21 12:58:49,337 | INFO     | chi2: 1.529743492513936
[2025-10-21 08:59:49] 2025-10-21 12:58:49,337 | INFO     | current chi2=1.529743492513936 (change=33.224887875238075 %)
[2025-10-21 08:59:49] 2025-10-21 12:58:49,337 | INFO     | sum of square deviations: 681212772.5
[2025-10-21 08:59:49] 2025-10-21 12:58:49,338 | INFO     | sum of deviations: 1401442456.4999967
[2025-10-21 08:59:49] 2025-10-21 12:58:49,338 | INFO     | mean x: 1761046954.5
[2025-10-21 08:59:49] 2025-10-21 12:58:49,338 | INFO     | mean y: 2519887.3615384614
[2025-10-21 08:59:49] 2025-10-21 12:58:49,338 | INFO     | -- intersect: -3620439149.165214
[2025-10-21 08:59:49] 2025-10-21 12:58:49,338 | INFO     | intersect: -3620439149.165214
[2025-10-21 08:59:49] 2025-10-21 12:58:49,338 | INFO     | chi2: 1.5304817681991834
[2025-10-21 08:59:49] 2025-10-21 12:58:49,339 | INFO     | current chi2=1.5304817681991834 (change=-0.04826140387982066 %)
[2025-10-21 08:59:49] 2025-10-21 12:58:49,339 | INFO     | right removable region: 129
[2025-10-21 08:59:49] 2025-10-21 12:58:49,339 | INFO     | sum of square deviations: 762879420.0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,340 | INFO     | sum of deviations: -27684984565.999992
[2025-10-21 08:59:49] 2025-10-21 12:58:49,340 | INFO     | mean x: 1761047412.0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,340 | INFO     | mean y: 2537234.5037037036
[2025-10-21 08:59:49] 2025-10-21 12:58:49,340 | INFO     | -- intersect: 63911156530.08547
[2025-10-21 08:59:49] 2025-10-21 12:58:49,340 | INFO     | intersect: 63911156530.08547
[2025-10-21 08:59:49] 2025-10-21 12:58:49,340 | INFO     | chi2: 0.9353024728131495
[2025-10-21 08:59:49] 2025-10-21 12:58:49,341 | INFO     | current chi2=0.9353024728131495 (change=59.172941216420185 %)
[2025-10-21 08:59:49] 2025-10-21 12:58:49,341 | INFO     | sum of square deviations: 681212772.5
[2025-10-21 08:59:49] 2025-10-21 12:58:49,341 | INFO     | sum of deviations: -25125864375.999992
[2025-10-21 08:59:49] 2025-10-21 12:58:49,342 | INFO     | mean x: 1761047564.5
[2025-10-21 08:59:49] 2025-10-21 12:58:49,342 | INFO     | mean y: 2532375.7538461536
[2025-10-21 08:59:49] 2025-10-21 12:58:49,342 | INFO     | -- intersect: 64957042994.99226
[2025-10-21 08:59:49] 2025-10-21 12:58:49,342 | INFO     | intersect: 64957042994.99226
[2025-10-21 08:59:49] 2025-10-21 12:58:49,342 | INFO     | chi2: 0.9252367670557994
[2025-10-21 08:59:49] 2025-10-21 12:58:49,342 | INFO     | current chi2=0.9252367670557994 (change=1.0761979199172917 %)
[2025-10-21 08:59:49] 2025-10-21 12:58:49,342 | INFO     | left removable region: 20
[2025-10-21 08:59:49] 2025-10-21 12:58:49,343 | INFO     | sum of square deviations: 401533110.0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,343 | INFO     | sum of deviations: -6908856583.999998
[2025-10-21 08:59:49] 2025-10-21 12:58:49,343 | INFO     | mean x: 1761047534.0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,343 | INFO     | mean y: 2531914.981651376
[2025-10-21 08:59:49] 2025-10-21 12:58:49,344 | INFO     | -- intersect: 30303457410.298492
[2025-10-21 08:59:49] 2025-10-21 12:58:49,344 | INFO     | intersect: 30303457410.298492
[2025-10-21 08:59:49] 2025-10-21 12:58:49,344 | INFO     | chi2: 0.09273410754600277
[2025-10-21 08:59:49] 2025-10-21 12:58:49,344 | INFO     | -- intersect: 30303457410.298492
[2025-10-21 08:59:49] 2025-10-21 12:58:49,344 | INFO     | current memory leak: -17.21 B/s (using 109 data points, chi2=0.09)
[2025-10-21 08:59:49] 2025-10-21 12:58:49,345 | INFO     | could have reported an average CPU frequency of 1985 MHz (8 samples)
[2025-10-21 08:59:49] 2025-10-21 12:58:49,345 | INFO     | ..............................
[2025-10-21 08:59:49] 2025-10-21 12:58:49,345 | INFO     | . Timing measurements:
[2025-10-21 08:59:49] 2025-10-21 12:58:49,345 | INFO     | . get job = 0 s
[2025-10-21 08:59:49] 2025-10-21 12:58:49,345 | INFO     | . initial setup = 3 s
[2025-10-21 08:59:49] 2025-10-21 12:58:49,345 | INFO     | . payload setup = 8 s
[2025-10-21 08:59:49] 2025-10-21 12:58:49,345 | INFO     | . stage-in = 0 s
[2025-10-21 08:59:49] 2025-10-21 12:58:49,346 | INFO     | . payload execution = 8497 s
[2025-10-21 08:59:49] 2025-10-21 12:58:49,346 | INFO     | . stage-out = 0 s
[2025-10-21 08:59:49] 2025-10-21 12:58:49,346 | INFO     | . log creation = 0 s
[2025-10-21 08:59:49] 2025-10-21 12:58:49,346 | INFO     | ..............................
[2025-10-21 08:59:49] 2025-10-21 12:58:49,449 | INFO     | 
[2025-10-21 08:59:49] 2025-10-21 12:58:49,449 | INFO     | job summary report
[2025-10-21 08:59:49] 2025-10-21 12:58:49,449 | INFO     | --------------------------------------------------
[2025-10-21 08:59:49] 2025-10-21 12:58:49,450 | INFO     | PanDA job id: 6852987714
[2025-10-21 08:59:49] 2025-10-21 12:58:49,450 | INFO     | task id: 46771637
[2025-10-21 08:59:49] 2025-10-21 12:58:49,450 | INFO     | errors: (none)
[2025-10-21 08:59:49] 2025-10-21 12:58:49,450 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 08:59:49] 2025-10-21 12:58:49,450 | INFO     | pilot state: finished 
[2025-10-21 08:59:49] 2025-10-21 12:58:49,451 | INFO     | transexitcode: 0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,451 | INFO     | exeerrorcode: 0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,451 | INFO     | exeerrordiag: 
[2025-10-21 08:59:49] 2025-10-21 12:58:49,451 | INFO     | exitcode: 0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,451 | INFO     | exitmsg: OK
[2025-10-21 08:59:49] 2025-10-21 12:58:49,452 | INFO     | cpuconsumptiontime: 63619 s
[2025-10-21 08:59:49] 2025-10-21 12:58:49,452 | INFO     | nevents: 400
[2025-10-21 08:59:49] 2025-10-21 12:58:49,452 | INFO     | neventsw: 0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,452 | INFO     | pid: 22674
[2025-10-21 08:59:49] 2025-10-21 12:58:49,452 | INFO     | pgrp: 22674
[2025-10-21 08:59:49] 2025-10-21 12:58:49,452 | INFO     | corecount: 8
[2025-10-21 08:59:49] 2025-10-21 12:58:49,453 | INFO     | event service: False
[2025-10-21 08:59:49] 2025-10-21 12:58:49,453 | INFO     | sizes: {0: 2348931, 6: 2349193, 11: 2349221, 8509: 2377075, 8511: 2386073, 8514: 2386129, 8523: 2386479}
[2025-10-21 08:59:49] 2025-10-21 12:58:49,453 | INFO     | --------------------------------------------------
[2025-10-21 08:59:49] 2025-10-21 12:58:49,453 | INFO     | 
[2025-10-21 08:59:49] 2025-10-21 12:58:49,454 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 08:59:49] 2025-10-21 12:58:49,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,485 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,485 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,486 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,488 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 08:59:49] 2025-10-21 12:58:49,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,489 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 08:59:49] 2025-10-21 12:58:49,489 | INFO     | job 6852987714 has completed (purged errors)
[2025-10-21 08:59:49] 2025-10-21 12:58:49,489 | INFO     | overall cleanup function is called
[2025-10-21 08:59:49] 2025-10-21 12:58:50,495 | INFO     | --- collectZombieJob: --- 10, [22674]
[2025-10-21 08:59:49] 2025-10-21 12:58:50,495 | INFO     | zombie collector waiting for pid 22674
[2025-10-21 08:59:49] 2025-10-21 12:58:50,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 08:59:49] 2025-10-21 12:58:50,496 | INFO     | collected zombie processes
[2025-10-21 08:59:49] 2025-10-21 12:58:50,496 | INFO     | will attempt to kill all subprocesses of pid=22674
[2025-10-21 08:59:49] 2025-10-21 12:58:50,593 | INFO     | process IDs to be killed: [22674] (in reverse order)
[2025-10-21 08:59:49] 2025-10-21 12:58:50,652 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 08:59:49] 2025-10-21 12:58:50,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 08:59:49] 2025-10-21 12:58:50,658 | INFO     | did not find any defunct processes belonging to 22674
[2025-10-21 08:59:49] 2025-10-21 12:58:50,662 | INFO     | did not find any defunct processes belonging to 22674
[2025-10-21 08:59:49] 2025-10-21 12:58:50,662 | INFO     | ready for new job
[2025-10-21 08:59:49] 2025-10-21 12:58:50,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 08:59:49] 2025-10-21 12:58:50,665 | INFO     | ***************************************
[2025-10-21 08:59:49] 2025-10-21 12:58:50,665 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 08:59:49] 2025-10-21 12:58:50,665 | INFO     | ***************************************
[2025-10-21 08:59:49] 2025-10-21 12:58:50,666 | INFO     | 
[2025-10-21 08:59:49] 2025-10-21 12:58:50,666 | INFO     | architecture information:
[2025-10-21 08:59:49] 2025-10-21 12:58:50,667 | INFO     | executing command: cat /etc/os-release
[2025-10-21 08:59:49] 2025-10-21 12:58:50,686 | INFO     | cat /etc/os-release:
[2025-10-21 08:59:49] NAME="CentOS Linux"
[2025-10-21 08:59:49] VERSION="7 (Core)"
[2025-10-21 08:59:49] ID="centos"
[2025-10-21 08:59:49] ID_LIKE="rhel fedora"
[2025-10-21 08:59:49] VERSION_ID="7"
[2025-10-21 08:59:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 08:59:49] ANSI_COLOR="0;31"
[2025-10-21 08:59:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 08:59:49] HOME_URL="https://www.centos.org/"
[2025-10-21 08:59:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 08:59:49] 
[2025-10-21 08:59:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 08:59:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 08:59:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 08:59:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 08:59:49] 
[2025-10-21 08:59:49] 2025-10-21 12:58:50,686 | INFO     | ***************************************
[2025-10-21 08:59:49] 2025-10-21 12:58:51,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 08:59:49] 2025-10-21 12:58:51,210 | INFO     | sufficient remaining disk space (18515755008 B)
[2025-10-21 08:59:49] 2025-10-21 12:58:51,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 08:59:49] 2025-10-21 12:58:51,211 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 08:59:49] 2025-10-21 12:58:51,211 | INFO     | update_server=False
[2025-10-21 08:59:49] 2025-10-21 12:58:51,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 08:59:49] 2025-10-21 12:58:51,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 08:59:49] 2025-10-21 12:58:51,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 08:59:49] 2025-10-21 12:58:51,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 08:59:49] 2025-10-21 12:58:51,213 | INFO     | aborting loop
[2025-10-21 08:59:49] 2025-10-21 12:58:51,318 | INFO     | all data control threads have been joined
[2025-10-21 08:59:49] 2025-10-21 12:58:51,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 08:59:49] 2025-10-21 12:58:51,716 | INFO     | all job control threads have been joined
[2025-10-21 08:59:49] 2025-10-21 12:58:52,216 | INFO     | [job] retrieve thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:52,217 | INFO     | [job] queue monitor thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:52,219 | INFO     | [job] job monitor thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:52,228 | INFO     | all payload control threads have been joined
[2025-10-21 08:59:49] 2025-10-21 12:58:52,324 | INFO     | [data] control thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:52,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:52,721 | INFO     | [job] control thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:52,742 | INFO     | [payload] failed_post thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:53,218 | INFO     | [data] copytool_out thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:53,233 | INFO     | [payload] control thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:53,311 | INFO     | [payload] validate_post thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:53,464 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:53,525 | INFO     | [data] copytool_in thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:53,528 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:53,552 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:53,554 | INFO     | [job] validate thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:58:55,521 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 08:59:49] 2025-10-21 12:59:22,010 | INFO     | PID=16204 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 08:59:49] 2025-10-21 12:59:22,010 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 08:59:49] 2025-10-21 12:59:22,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 08:59:49] 2025-10-21 12:59:22,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 08:59:49] 2025-10-21 12:59:42,739 | INFO     | [monitor] cgroup control has ended
[2025-10-21 08:59:49] 2025-10-21 12:59:44,469 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571344926528)>', '<ExcThread(monitor, started 140570362103552)>']
[2025-10-21 08:59:49] 2025-10-21 12:59:45,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 08:59:49] 2025-10-21 12:59:45,121 | INFO     | [monitor] control thread has ended
[2025-10-21 08:59:49] 2025-10-21 12:59:49,483 | INFO     | all workflow threads have been joined
[2025-10-21 08:59:49] 2025-10-21 12:59:49,483 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 08:59:49] 2025-10-21 12:59:49,484 | INFO     | traces error code: 0
[2025-10-21 08:59:49] 2025-10-21 12:59:49,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 08:59:49] 2025-10-21 12:59:49,609 [wrapper] ==== pilot stdout END ====
[2025-10-21 08:59:49] 2025-10-21 12:59:49,614 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 08:59:49] 2025-10-21 12:59:49,619 [wrapper] pilotpid: 16204
[2025-10-21 08:59:49] 2025-10-21 12:59:49,624 [wrapper] Pilot exit status: 0
[2025-10-21 08:59:49] 2025-10-21 12:59:49,643 [wrapper] pandaids: 6852987714
[2025-10-21 08:59:49] 2025-10-21 12:59:49,698 [wrapper] cleanup supervisor_pilot 29817 16205
[2025-10-21 08:59:49] 2025-10-21 12:59:49,703 [wrapper] Test setup, not cleaning
[2025-10-21 08:59:49] 2025-10-21 12:59:49,708 [wrapper] apfmon messages muted
[2025-10-21 08:59:49] 2025-10-21 12:59:49,712 [wrapper] ==== wrapper stdout END ====
[2025-10-21 08:59:49] 2025-10-21 12:59:49,717 [wrapper] ==== wrapper stderr END ====
[2025-10-21 08:59:49]  *** Error codes and diagnostics ***
[2025-10-21 08:59:49]     "exeErrorCode": 0,
[2025-10-21 08:59:49]     "exeErrorDiag": "",
[2025-10-21 08:59:49]     "pilotErrorCode": 0,
[2025-10-21 08:59:49]     "pilotErrorDiag": "",
[2025-10-21 08:59:49]  *** Listing of results directory ***
[2025-10-21 08:59:49] total 438748
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 21 00:55 pilot3.tar.gz
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 21 01:23 queuedata.json
[2025-10-21 08:59:49] -rwx------ 1 boincer umatlas     36292 Oct 21 01:24 runpilot2-wrapper.sh
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas       100 Oct 21 06:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 08:59:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 21 06:36 run_atlas
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas       105 Oct 21 06:36 job.xml
[2025-10-21 08:59:49] -rw-r--r-- 2 boincer umatlas 230101532 Oct 21 06:36 EVNT.46771634._002451.pool.root.1
[2025-10-21 08:59:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 06:36 start_atlas.sh
[2025-10-21 08:59:49] drwxrwx--x 2 boincer umatlas      4096 Oct 21 06:36 shared
[2025-10-21 08:59:49] -rw-r--r-- 2 boincer umatlas    569676 Oct 21 06:36 input.tar.gz
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas         0 Oct 21 06:36 boinc_lockfile
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas      2560 Oct 21 06:36 pandaJob.out
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas    978846 Oct 21 06:36 agis_schedconf.cvmfs.json
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas   1560740 Oct 21 06:36 agis_ddmendpoints.agis.ALL.json
[2025-10-21 08:59:49] drwx------ 5 boincer umatlas      4096 Oct 21 06:36 pilot3
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas      5910 Oct 21 08:57 init_data.xml
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas 212100119 Oct 21 08:57 HITS.46771637._062233.pool.root.1
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas       530 Oct 21 08:58 boinc_task_state.xml
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas        95 Oct 21 08:58 pilot_heartbeat.json
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas      1051 Oct 21 08:58 memory_monitor_summary.json
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas    392886 Oct 21 08:58 log.46771637._062233.job.log.tgz.1
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas      7850 Oct 21 08:58 heartbeat.json
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 21 08:59 boinc_mmap_file
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas        27 Oct 21 08:59 wrapper_checkpoint.txt
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas      4746 Oct 21 08:59 pilotlog.txt
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas   1193574 Oct 21 08:59 log.46771637._062233.job.log.1
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas       357 Oct 21 08:59 output.list
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas       620 Oct 21 08:59 runtime_log
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas   1607680 Oct 21 08:59 result.tar.gz
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas      8703 Oct 21 08:59 runtime_log.err
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas       660 Oct 21 08:59 ApsLDmr2JV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5X1NDmtjfSEo.diag
[2025-10-21 08:59:49] -rw-r--r-- 1 boincer umatlas     20871 Oct 21 08:59 stderr.txt
[2025-10-21 08:59:49] HITS file was successfully produced:
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas 212100119 Oct 21 08:57 shared/HITS.pool.root.1
[2025-10-21 08:59:49]  *** Contents of shared directory: ***
[2025-10-21 08:59:49] total 433992
[2025-10-21 08:59:49] -rw-r--r-- 2 boincer umatlas 230101532 Oct 21 06:36 ATLAS.root_0
[2025-10-21 08:59:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 06:36 start_atlas.sh
[2025-10-21 08:59:49] -rw-r--r-- 2 boincer umatlas    569676 Oct 21 06:36 input.tar.gz
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas 212100119 Oct 21 08:57 HITS.pool.root.1
[2025-10-21 08:59:49] -rw------- 1 boincer umatlas   1607680 Oct 21 08:59 result.tar.gz
08:59:50 (12450): run_atlas exited; CPU time 63574.934148
08:59:50 (12450): called boinc_finish(0)

</stderr_txt>
]]>

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