Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-22 22:03:23 (4752): vboxwrapper version 26210
2025-10-22 22:03:23 (4752): BOINC client version: 8.2.4
2025-10-22 22:03:23 (4752): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-22 22:03:24 (4752): Successfully copied 'init_data.xml' to the shared directory.
2025-10-22 22:03:24 (4752): Create VM. (boinc_e1a86afefc0136d8, slot#0)
2025-10-22 22:03:24 (4752): Setting Memory Size for VM. (6600MB)
2025-10-22 22:03:25 (4752): Setting CPU Count for VM. (4)
2025-10-22 22:03:25 (4752): Setting Chipset Options for VM.
2025-10-22 22:03:25 (4752): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-22 22:03:25 (4752): Setting Boot Options for VM.
2025-10-22 22:03:26 (4752): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-22 22:03:26 (4752): Enabling VM Network Access.
2025-10-22 22:03:26 (4752): Disabling USB Support for VM.
2025-10-22 22:03:27 (4752): Disabling COM Port Support for VM.
2025-10-22 22:03:27 (4752): Disabling LPT Port Support for VM.
2025-10-22 22:03:27 (4752): Disabling Audio Support for VM.
2025-10-22 22:03:27 (4752): Disabling Clipboard Support for VM.
2025-10-22 22:03:28 (4752): Disabling Drag and Drop Support for VM.
2025-10-22 22:03:28 (4752): Adding storage controller(s) to VM.
2025-10-22 22:03:28 (4752): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-22 22:03:29 (4752): Adding VirtualBox Guest Additions to VM.
2025-10-22 22:03:29 (4752): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-22 22:03:29 (4752): forwarding host port 57101 to guest port 80
2025-10-22 22:03:30 (4752): Enabling remote desktop for VM.
2025-10-22 22:03:30 (4752): Enabling shared directory for VM.
2025-10-22 22:03:31 (4752): Starting VM using VBoxManage interface. (boinc_e1a86afefc0136d8, slot#0)
2025-10-22 22:03:38 (4752): Successfully started VM. (PID = '6164')
2025-10-22 22:03:38 (4752): Reporting VM Process ID to BOINC.
2025-10-22 22:03:38 (4752): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-22 22:03:38 (4752): Guest Log: CPUID EDX: 0x178bfbff
2025-10-22 22:03:38 (4752): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-22 22:03:38 (4752): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-22 22:03:38 (4752): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-22 22:03:38 (4752): Detected: Web Application Enabled (http://localhost:57101)
2025-10-22 22:03:38 (4752): Detected: Remote Desktop Enabled (localhost:57102)
2025-10-22 22:03:38 (4752): Preference change detected
2025-10-22 22:03:38 (4752): Setting CPU throttle for VM. (100%)
2025-10-22 22:03:38 (4752): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-22 22:03:40 (4752): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-22 22:03:40 (4752): Guest Log: BIOS: Booting from Hard Disk...
2025-10-22 22:03:43 (4752): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-22 22:03:43 (4752): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-22 22:03:43 (4752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-22 22:03:51 (4752): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-22 22:03:51 (4752): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-22 22:03:58 (4752): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-22 22:03:58 (4752): Guest Log: 00:00:00.000191 main     Log opened 2025-10-22T22:03:56.914069000Z
2025-10-22 22:03:58 (4752): Guest Log: 00:00:00.000338 main     OS Product: Linux
2025-10-22 22:03:58 (4752): Guest Log: 00:00:00.000389 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-22 22:03:58 (4752): Guest Log: 00:00:00.000431 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-22 22:03:58 (4752): Guest Log: 00:00:00.000474 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-22 22:03:58 (4752): Guest Log: 00:00:00.000475 main     Process ID: 1375
2025-10-22 22:03:58 (4752): Guest Log: 00:00:00.000475 main     Package type: LINUX_64BITS_GENERIC
2025-10-22 22:03:58 (4752): Guest Log: 00:00:00.001656 main     5.2.32 r132073 started. Verbose level = 0
2025-10-22 22:03:58 (4752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-22 22:03:58 (4752): Guest Log: [INFO] Mounting shared directory
2025-10-22 22:03:58 (4752): Guest Log: [INFO] Checking for init_data.xml
2025-10-22 22:04:03 (4752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-22 22:04:03 (4752): Guest Log: [INFO] Detected branch: prod
2025-10-22 22:04:04 (4752): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-22 22:04:04 (4752): Guest Log: Copying input files
2025-10-22 22:04:06 (4752): Guest Log: Copied input files into RunAtlas.
2025-10-22 22:04:06 (4752): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2025-10-22 22:04:08 (4752): Guest Log: 00:00:10.003798 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 900 647 000ns (GuestNow=1 761 167 048 016 495 000 ns GuestLast=1 761 170 636 917 142 000 ns fSetTimeLastLoop=true )
2025-10-22 22:04:18 (4752): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-22 22:04:19 (4752): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-22 22:04:19 (4752): Guest Log: 2.6.3.0 1668 0 29600 152009 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2025-10-22 22:04:20 (4752): Guest Log: copied the webapp to /var/www
2025-10-22 22:04:20 (4752): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-22 22:04:20 (4752): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-22 22:04:20 (4752): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-22 22:04:20 (4752): Guest Log:  *** Starting ATLAS job. (PandaID=6852960704 taskID=46771637) ***
2025-10-22 23:43:57 (4752): Status Report: Elapsed Time: '6000.000000'
2025-10-22 23:43:57 (4752): Status Report: CPU Time: '21548.296875'
2025-10-23 01:24:23 (4752): Status Report: Elapsed Time: '12000.000000'
2025-10-23 01:24:23 (4752): Status Report: CPU Time: '44986.875000'
2025-10-23 03:04:15 (4752): Guest Log:  *** Job finished ***
2025-10-23 03:04:15 (4752): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:03:56,933 | INFO     | all workflow threads have been joined
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:03:56,934 | INFO     | end of generic workflow (traces error code: 0)
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:03:56,934 | INFO     | traces error code: 0
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:03:56,934 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:14,846 | INFO     | PID=6059 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:14,846 | INFO     | found 0 job(s) in 20 queues
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:14,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:14,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:14,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:14,847 | INFO     | [monitor] control thread has ended
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:14,943 [wrapper] ==== pilot stdout END ====
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:14,949 [wrapper] ==== wrapper stdout RESUME ====
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:14,954 [wrapper] pilotpid: 6059
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:14,960 [wrapper] Pilot exit status: 0
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:15,034 [wrapper] pandaids: 6852960704
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:15,068 [wrapper] cleanup supervisor_pilot 19516 6060
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:15,074 [wrapper] Test setup, not cleaning
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:15,080 [wrapper] apfmon messages muted
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:15,086 [wrapper] ==== wrapper stdout END ====
2025-10-23 03:04:15 (4752): Guest Log: 2025-10-23 02:04:15,094 [wrapper] ==== wrapper stderr END ====
2025-10-23 03:04:15 (4752): Guest Log:  *** Error codes and diagnostics ***
2025-10-23 03:04:15 (4752): Guest Log:     "exeErrorCode": 0,
2025-10-23 03:04:15 (4752): Guest Log:     "exeErrorDiag": "",
2025-10-23 03:04:15 (4752): Guest Log:     "pilotErrorCode": 0,
2025-10-23 03:04:15 (4752): Guest Log:     "pilotErrorDiag": "",
2025-10-23 03:04:15 (4752): Guest Log:  *** Listing of results directory ***
2025-10-23 03:04:15 (4752): Guest Log: total 202920
2025-10-23 03:04:15 (4752): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 21 01:53 pilot3.tar.gz
2025-10-23 03:04:15 (4752): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 21 02:08 runpilot2-wrapper.sh
2025-10-23 03:04:15 (4752): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 21 02:08 queuedata.json
2025-10-23 03:04:15 (4752): Guest Log: -rwxr-xr-x. 1 atlas atlas      9544 Oct 22 21:04 init_data.xml
2025-10-23 03:04:15 (4752): Guest Log: -rwxr-xr-x. 1 atlas atlas    569677 Oct 22 21:04 input.tar.gz
2025-10-23 03:04:15 (4752): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 22 21:04 start_atlas.sh
2025-10-23 03:04:15 (4752): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 22 21:04 EVNT.46771634._002331.pool.root.1 -> /data/./ATLAS.root_0
2025-10-23 03:04:15 (4752): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Oct 22 21:04 pandaJob.out
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas    978023 Oct 22 21:05 agis_schedconf.cvmfs.json
2025-10-23 03:04:15 (4752): Guest Log: drwx------. 5 atlas atlas      4096 Oct 22 21:05 pilot3
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas 198285897 Oct 23 02:02 HITS.46771637._059327.pool.root.1
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas        95 Oct 23 02:03 pilot_heartbeat.json
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 23 02:03 memory_monitor_summary.json
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 23 02:03 agis_ddmendpoints.agis.ALL.json
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas    453417 Oct 23 02:03 log.46771637._059327.job.log.tgz.1
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas      7832 Oct 23 02:03 heartbeat.json
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas       744 Oct 23 02:04 pilotlog.txt
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas   2382182 Oct 23 02:04 log.46771637._059327.job.log.1
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas       357 Oct 23 02:04 output.list
2025-10-23 03:04:15 (4752): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 23 02:04 runtime_log
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas   2856960 Oct 23 02:04 result.tar.gz
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas       659 Oct 23 02:04 sf8NDmUyGV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcbeMDmyf0oan.diag
2025-10-23 03:04:15 (4752): Guest Log: -rw-r--r--. 1 atlas atlas      8643 Oct 23 02:04 runtime_log.err
2025-10-23 03:04:15 (4752): Guest Log: Looking for outputfile HITS.46771637._059327.pool.root.1
2025-10-23 03:04:15 (4752): Guest Log: HITS file was successfully produced
2025-10-23 03:04:15 (4752): Guest Log: -rw-------. 1 atlas atlas 198285897 Oct 23 02:02 /home/atlas/RunAtlas/HITS.46771637._059327.pool.root.1
2025-10-23 03:04:17 (4752): Guest Log: Successfully finished the ATLAS job!
2025-10-23 03:04:17 (4752): Guest Log: Copying the results back to the shared directory!
2025-10-23 03:04:17 (4752): Guest Log:  *** Contents of shared directory: ***
2025-10-23 03:04:17 (4752): Guest Log: total 421152
2025-10-23 03:04:17 (4752): Guest Log: -rwxrwxrwx. 1 root root 229510375 Oct 22 21:03 ATLAS.root_0
2025-10-23 03:04:17 (4752): Guest Log: -rwxrwxrwx. 1 root root 198285897 Oct 23 02:04 HITS.pool.root.1
2025-10-23 03:04:17 (4752): Guest Log: -rwxrwxrwx. 1 root root      9544 Oct 22 21:03 init_data.xml
2025-10-23 03:04:17 (4752): Guest Log: -rwxrwxrwx. 1 root root    569677 Oct 21 09:00 input.tar.gz
2025-10-23 03:04:17 (4752): Guest Log: -rwxrwxrwx. 1 root root   2856960 Oct 23 02:04 result.tar.gz
2025-10-23 03:04:17 (4752): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 21 09:00 start_atlas.sh
2025-10-23 03:04:17 (4752): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-23 03:04:17 (4752): VM Completion File Detected.
2025-10-23 03:04:17 (4752): Powering off VM.
2025-10-23 03:04:18 (4752): Successfully stopped VM.
2025-10-23 03:04:18 (4752): Deregistering VM. (boinc_e1a86afefc0136d8, slot#0)
2025-10-23 03:04:18 (4752): Removing network bandwidth throttle group from VM.
2025-10-23 03:04:18 (4752): Removing VM from VirtualBox.
2025-10-23 03:04:23 (4752): called boinc_finish(0)

</stderr_txt>
]]>

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