Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:46:17 (988071): wrapper (7.7.26015): starting
14:46:17 (988071): wrapper: running run_atlas (--nthreads 3)
[2025-10-21 14:46:17] Arguments: --nthreads 3
[2025-10-21 14:46:17] Threads: 3
[2025-10-21 14:46:17] Checking for CVMFS
[2025-10-21 14:46:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 14:46:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 14:46:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 14:46:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 14:46:17] 2.9.2.0 788955 682 72728 151958 2 57 31166094 36864000 0 130560 0 525518 99.988 25406 2166 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 14:46:17] CVMFS is ok
[2025-10-21 14:46:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 14:46:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 14:46:17] Further information can be found at the LHC@home message board.
[2025-10-21 14:46:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 14:46:17] Checking for apptainer binary...
[2025-10-21 14:46:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 14:46:17] Running /usr/bin/apptainer --version
[2025-10-21 14:46:17] apptainer version 1.4.1-1.1
[2025-10-21 14:46:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 14:46:17] magicA161
[2025-10-21 14:46:17] apptainer works
[2025-10-21 14:46:17] Set ATHENA_PROC_NUMBER=3
[2025-10-21 14:46:17] Set ATHENA_CORE_NUMBER=3
[2025-10-21 14:46:17] Starting ATLAS job with PandaID=6852988202
[2025-10-21 14:46:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 16:17:37]  *** The last 200 lines of the pilot log: ***
[2025-10-21 16:17:37] 2025-10-21 14:16:51,354 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-21 16:17:37] 2025-10-21 14:16:51,367 | INFO     | sufficient remaining disk space (373417836544 B)
[2025-10-21 16:17:37] 2025-10-21 14:16:51,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 16:17:37] 2025-10-21 14:16:51,368 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 16:17:37] 2025-10-21 14:16:51,368 | INFO     | update_server=False
[2025-10-21 16:17:37] 2025-10-21 14:16:51,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 16:17:37] 2025-10-21 14:16:51,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 16:17:37] 2025-10-21 14:16:51,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 16:17:37] 2025-10-21 14:16:51,368 | INFO     | aborting loop
[2025-10-21 16:17:37] 2025-10-21 14:16:51,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 16:17:37] 2025-10-21 14:16:51,733 | INFO     | all payload control threads have been joined
[2025-10-21 16:17:37] 2025-10-21 14:16:51,756 | INFO     | all data control threads have been joined
[2025-10-21 16:17:37] 2025-10-21 14:16:52,373 | INFO     | [job] queue monitor thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:52,374 | INFO     | [job] retrieve thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:52,374 | INFO     | [job] job monitor thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:52,429 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:52,430 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:52,568 | INFO     | [payload] failed_post thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:52,739 | INFO     | [payload] control thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:52,757 | INFO     | [data] control thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:53,056 | INFO     | all job control threads have been joined
[2025-10-21 16:17:37] 2025-10-21 14:16:53,093 | INFO     | [payload] validate_post thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:53,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 16:17:37] 2025-10-21 14:16:53,476 | INFO     | [data] copytool_in thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:53,476 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:53,687 | INFO     | [data] copytool_out thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:53,774 | INFO     | [job] validate thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:54,062 | INFO     | [job] control thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:16:57,352 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:17:01,647 | INFO     | job.realtimelogging is not enabled
[2025-10-21 16:17:37] 2025-10-21 14:17:02,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 16:17:37] 2025-10-21 14:17:20,830 | INFO     | 5428s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-21 16:17:37] 2025-10-21 14:17:21,890 | INFO     | PID=991795 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 16:17:37] 2025-10-21 14:17:21,890 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 16:17:37] 2025-10-21 14:17:21,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 16:17:37] 2025-10-21 14:17:21,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 16:17:37] 2025-10-21 14:17:30,130 | INFO     | [monitor] cgroup control has ended
[2025-10-21 16:17:37] 2025-10-21 14:17:31,957 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047323113280)>', '<ExcThread(monitor, started 140046954895104)>']
[2025-10-21 16:17:37] 2025-10-21 14:17:32,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 16:17:37] 2025-10-21 14:17:32,949 | INFO     | [monitor] control thread has ended
[2025-10-21 16:17:37] 2025-10-21 14:17:36,983 | INFO     | all workflow threads have been joined
[2025-10-21 16:17:37] 2025-10-21 14:17:36,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 16:17:37] 2025-10-21 14:17:36,983 | INFO     | traces error code: 0
[2025-10-21 16:17:37] 2025-10-21 14:17:36,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 16:17:37] 2025-10-21 14:17:37,033 [wrapper] ==== pilot stdout END ====
[2025-10-21 16:17:37] 2025-10-21 14:17:37,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 16:17:37] 2025-10-21 14:17:37,039 [wrapper] pilotpid: 991795
[2025-10-21 16:17:37] 2025-10-21 14:17:37,041 [wrapper] Pilot exit status: 0
[2025-10-21 16:17:37] 2025-10-21 14:17:37,049 [wrapper] pandaids: 6852988202
[2025-10-21 16:17:37] 2025-10-21 14:17:37,066 [wrapper] cleanup supervisor_pilot 1010149 991796
[2025-10-21 16:17:37] 2025-10-21 14:17:37,069 [wrapper] Test setup, not cleaning
[2025-10-21 16:17:37] 2025-10-21 14:17:37,071 [wrapper] apfmon messages muted
[2025-10-21 16:17:37] 2025-10-21 14:17:37,074 [wrapper] ==== wrapper stdout END ====
[2025-10-21 16:17:37] 2025-10-21 14:17:37,076 [wrapper] ==== wrapper stderr END ====
[2025-10-21 16:17:37]  *** Error codes and diagnostics ***
[2025-10-21 16:17:37]     "exeErrorCode": 0,
[2025-10-21 16:17:37]     "exeErrorDiag": "",
[2025-10-21 16:17:37]     "pilotErrorCode": 0,
[2025-10-21 16:17:37]     "pilotErrorDiag": "",
[2025-10-21 16:17:37]  *** Listing of results directory ***
[2025-10-21 16:17:37] total 431016
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc    557409 Oct 21 06:55 pilot3.tar.gz
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc      5112 Oct 21 07:53 queuedata.json
[2025-10-21 16:17:37] -rwx------ 1 boinc boinc     36292 Oct 21 07:55 runpilot2-wrapper.sh
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc       100 Oct 21 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 16:17:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 14:46 run_atlas
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc       105 Oct 21 14:46 job.xml
[2025-10-21 16:17:37] -rw-r--r-- 2 boinc boinc 226105611 Oct 21 14:46 EVNT.46771634._002468.pool.root.1
[2025-10-21 16:17:37] -rw-r--r-- 2 boinc boinc    569681 Oct 21 14:46 input.tar.gz
[2025-10-21 16:17:37] -rw-r--r-- 2 boinc boinc     15120 Oct 21 14:46 start_atlas.sh
[2025-10-21 16:17:37] drwxrwx--x 2 boinc boinc      4096 Oct 21 14:46 shared
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc         0 Oct 21 14:46 boinc_setup_complete
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc      6449 Oct 21 14:46 init_data.xml
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc         0 Oct 21 14:46 boinc_lockfile
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc      2560 Oct 21 14:46 pandaJob.out
[2025-10-21 16:17:37] -rw------- 1 boinc boinc    978830 Oct 21 14:46 agis_schedconf.cvmfs.json
[2025-10-21 16:17:37] -rw------- 1 boinc boinc   1560740 Oct 21 14:46 agis_ddmendpoints.agis.ALL.json
[2025-10-21 16:17:37] drwx------ 5 boinc boinc      4096 Oct 21 14:46 pilot3
[2025-10-21 16:17:37] -rw------- 1 boinc boinc 209252789 Oct 21 16:16 HITS.46771637._062579.pool.root.1
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc       529 Oct 21 16:16 boinc_task_state.xml
[2025-10-21 16:17:37] -rw------- 1 boinc boinc      1018 Oct 21 16:16 memory_monitor_summary.json
[2025-10-21 16:17:37] -rw------- 1 boinc boinc    264249 Oct 21 16:16 log.46771637._062579.job.log.tgz.1
[2025-10-21 16:17:37] -rw------- 1 boinc boinc      7761 Oct 21 16:16 heartbeat.json
[2025-10-21 16:17:37] -rw------- 1 boinc boinc        95 Oct 21 16:16 pilot_heartbeat.json
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc      8192 Oct 21 16:17 boinc_mmap_file
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc        27 Oct 21 16:17 wrapper_checkpoint.txt
[2025-10-21 16:17:37] -rw------- 1 boinc boinc      4938 Oct 21 16:17 pilotlog.txt
[2025-10-21 16:17:37] -rw------- 1 boinc boinc    789387 Oct 21 16:17 log.46771637._062579.job.log.1
[2025-10-21 16:17:37] -rw------- 1 boinc boinc       357 Oct 21 16:17 output.list
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc       620 Oct 21 16:17 runtime_log
[2025-10-21 16:17:37] -rw------- 1 boinc boinc   1075200 Oct 21 16:17 result.tar.gz
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc      8792 Oct 21 16:17 runtime_log.err
[2025-10-21 16:17:37] -rw------- 1 boinc boinc       661 Oct 21 16:17 TGNODmwVKV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrb1NDm8XSENm.diag
[2025-10-21 16:17:37] -rw-r--r-- 1 boinc boinc      8089 Oct 21 16:17 stderr.txt
[2025-10-21 16:17:37] HITS file was successfully produced:
[2025-10-21 16:17:37] -rw------- 1 boinc boinc 209252789 Oct 21 16:16 shared/HITS.pool.root.1
[2025-10-21 16:17:37]  *** Contents of shared directory: ***
[2025-10-21 16:17:37] total 426796
[2025-10-21 16:17:37] -rw-r--r-- 2 boinc boinc 226105611 Oct 21 14:46 ATLAS.root_0
[2025-10-21 16:17:37] -rw-r--r-- 2 boinc boinc    569681 Oct 21 14:46 input.tar.gz
[2025-10-21 16:17:37] -rw-r--r-- 2 boinc boinc     15120 Oct 21 14:46 start_atlas.sh
[2025-10-21 16:17:37] -rw------- 1 boinc boinc 209252789 Oct 21 16:16 HITS.pool.root.1
[2025-10-21 16:17:37] -rw------- 1 boinc boinc   1075200 Oct 21 16:17 result.tar.gz
16:17:38 (988071): run_atlas exited; CPU time 15611.871870
16:17:38 (988071): called boinc_finish(0)

</stderr_txt>
]]>

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