Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:53:12 (211967): wrapper (7.7.26015): starting
16:53:12 (211967): wrapper: running run_atlas (--nthreads 3)
[2025-10-21 16:53:12] Arguments: --nthreads 3
[2025-10-21 16:53:12] Threads: 3
[2025-10-21 16:53:12] Checking for CVMFS
[2025-10-21 16:53:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 16:53:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 16:53:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 16:53:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 16:53:12] 2.9.2.0 4130834 928 75516 151962 1 57 31925106 36864001 0 130560 0 727571 99.989 35008 1718 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 16:53:12] CVMFS is ok
[2025-10-21 16:53:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 16:53:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 16:53:12] Further information can be found at the LHC@home message board.
[2025-10-21 16:53:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 16:53:12] Checking for apptainer binary...
[2025-10-21 16:53:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 16:53:12] Running /usr/bin/apptainer --version
[2025-10-21 16:53:12] apptainer version 1.4.1-1.1
[2025-10-21 16:53:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 16:53:12] magicA161a
[2025-10-21 16:53:12] apptainer works
[2025-10-21 16:53:12] Set ATHENA_PROC_NUMBER=3
[2025-10-21 16:53:12] Set ATHENA_CORE_NUMBER=3
[2025-10-21 16:53:12] Starting ATLAS job with PandaID=6853197086
[2025-10-21 16:53:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 17:59:28]  *** The last 200 lines of the pilot log: ***
[2025-10-21 17:59:28] 2025-10-21 15:59:08,893 | INFO     | architecture information:
[2025-10-21 17:59:28] 2025-10-21 15:59:08,893 | INFO     | executing command: cat /etc/os-release
[2025-10-21 17:59:28] 2025-10-21 15:59:08,901 | INFO     | cat /etc/os-release:
[2025-10-21 17:59:28] NAME="CentOS Linux"
[2025-10-21 17:59:28] VERSION="7 (Core)"
[2025-10-21 17:59:28] ID="centos"
[2025-10-21 17:59:28] ID_LIKE="rhel fedora"
[2025-10-21 17:59:28] VERSION_ID="7"
[2025-10-21 17:59:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 17:59:28] ANSI_COLOR="0;31"
[2025-10-21 17:59:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 17:59:28] HOME_URL="https://www.centos.org/"
[2025-10-21 17:59:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 17:59:28] 
[2025-10-21 17:59:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 17:59:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 17:59:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 17:59:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 17:59:28] 
[2025-10-21 17:59:28] 2025-10-21 15:59:08,901 | INFO     | ***************************************
[2025-10-21 17:59:28] 2025-10-21 15:59:09,404 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-21 17:59:28] 2025-10-21 15:59:09,416 | INFO     | sufficient remaining disk space (372797079552 B)
[2025-10-21 17:59:28] 2025-10-21 15:59:09,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 17:59:28] 2025-10-21 15:59:09,417 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 17:59:28] 2025-10-21 15:59:09,417 | INFO     | update_server=False
[2025-10-21 17:59:28] 2025-10-21 15:59:09,417 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 17:59:28] 2025-10-21 15:59:09,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 17:59:28] 2025-10-21 15:59:09,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 17:59:28] 2025-10-21 15:59:09,417 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-21 17:59:28] 2025-10-21 15:59:09,417 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 17:59:28] 2025-10-21 15:59:09,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 17:59:28] 2025-10-21 15:59:09,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 17:59:28] 2025-10-21 15:59:09,614 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-21 17:59:28] 2025-10-21 15:59:09,615 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-21 17:59:28] 2025-10-21 15:59:09,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 17:59:28] 2025-10-21 15:59:09,615 | INFO     | will abort loop
[2025-10-21 17:59:28] 2025-10-21 15:59:09,969 | INFO     | all payload control threads have been joined
[2025-10-21 17:59:28] 2025-10-21 15:59:10,102 | INFO     | all data control threads have been joined
[2025-10-21 17:59:28] 2025-10-21 15:59:10,420 | INFO     | all job control threads have been joined
[2025-10-21 17:59:28] 2025-10-21 15:59:10,422 | INFO     | [job] retrieve thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:10,422 | INFO     | [job] queue monitor thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:10,553 | INFO     | [data] copytool_in thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:10,586 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:10,620 | INFO     | [job] job monitor thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:10,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 17:59:28] 2025-10-21 15:59:10,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:10,975 | INFO     | [payload] control thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:11,012 | INFO     | [payload] validate_post thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:11,081 | INFO     | [job] validate thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:11,108 | INFO     | [data] control thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:11,108 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:11,201 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:11,423 | INFO     | [data] copytool_out thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:11,425 | INFO     | [job] control thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:11,889 | INFO     | [payload] failed_post thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:14,774 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 17:59:28] 2025-10-21 15:59:22,511 | INFO     | [monitor] cgroup control has ended
[2025-10-21 17:59:28] 2025-10-21 15:59:23,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836046423872)>', '<ExcThread(monitor, started 139835209676544)>']
[2025-10-21 17:59:28] 2025-10-21 15:59:24,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 17:59:28] 2025-10-21 15:59:24,495 | INFO     | [monitor] control thread has ended
[2025-10-21 17:59:28] 2025-10-21 15:59:28,610 | INFO     | all workflow threads have been joined
[2025-10-21 17:59:28] 2025-10-21 15:59:28,610 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 17:59:28] 2025-10-21 15:59:28,610 | INFO     | traces error code: 0
[2025-10-21 17:59:28] 2025-10-21 15:59:28,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 17:59:28] 2025-10-21 15:59:28,659 [wrapper] ==== pilot stdout END ====
[2025-10-21 17:59:28] 2025-10-21 15:59:28,662 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 17:59:28] 2025-10-21 15:59:28,664 [wrapper] pilotpid: 215687
[2025-10-21 17:59:28] 2025-10-21 15:59:28,666 [wrapper] Pilot exit status: 0
[2025-10-21 17:59:28] 2025-10-21 15:59:28,673 [wrapper] pandaids: 6853197086
[2025-10-21 17:59:28] 2025-10-21 15:59:28,689 [wrapper] cleanup supervisor_pilot  231488 215688
[2025-10-21 17:59:28] 2025-10-21 15:59:28,692 [wrapper] Test setup, not cleaning
[2025-10-21 17:59:28] 2025-10-21 15:59:28,694 [wrapper] apfmon messages muted
[2025-10-21 17:59:28] 2025-10-21 15:59:28,696 [wrapper] ==== wrapper stdout END ====
[2025-10-21 17:59:28] 2025-10-21 15:59:28,698 [wrapper] ==== wrapper stderr END ====
[2025-10-21 17:59:28]  *** Error codes and diagnostics ***
[2025-10-21 17:59:28]     "exeErrorCode": 0,
[2025-10-21 17:59:28]     "exeErrorDiag": "",
[2025-10-21 17:59:28]     "pilotErrorCode": 0,
[2025-10-21 17:59:28]     "pilotErrorDiag": "",
[2025-10-21 17:59:28]  *** Listing of results directory ***
[2025-10-21 17:59:28] total 337684
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc    557409 Oct 21 02:53 pilot3.tar.gz
[2025-10-21 17:59:28] -rwx------ 1 boinc boinc     36292 Oct 21 03:18 runpilot2-wrapper.sh
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc      5112 Oct 21 03:18 queuedata.json
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc       100 Oct 21 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 17:59:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 16:53 run_atlas
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc       105 Oct 21 16:53 job.xml
[2025-10-21 17:59:28] -rw-r--r-- 2 boinc boinc 191226223 Oct 21 16:53 EVNT.46809186._000156.pool.root.1
[2025-10-21 17:59:28] drwxrwx--x 2 boinc boinc      4096 Oct 21 16:53 shared
[2025-10-21 17:59:28] -rw-r--r-- 2 boinc boinc    569665 Oct 21 16:53 input.tar.gz
[2025-10-21 17:59:28] -rw-r--r-- 2 boinc boinc     15120 Oct 21 16:53 start_atlas.sh
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc         0 Oct 21 16:53 boinc_setup_complete
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc      6448 Oct 21 16:53 init_data.xml
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc         0 Oct 21 16:53 boinc_lockfile
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc      2492 Oct 21 16:53 pandaJob.out
[2025-10-21 17:59:28] -rw------- 1 boinc boinc    978836 Oct 21 16:53 agis_schedconf.cvmfs.json
[2025-10-21 17:59:28] -rw------- 1 boinc boinc   1560740 Oct 21 16:53 agis_ddmendpoints.agis.ALL.json
[2025-10-21 17:59:28] drwx------ 5 boinc boinc      4096 Oct 21 16:53 pilot3
[2025-10-21 17:59:28] -rw------- 1 boinc boinc        95 Oct 21 17:58 pilot_heartbeat.json
[2025-10-21 17:59:28] -rw------- 1 boinc boinc 148998369 Oct 21 17:58 HITS.46809188._003942.pool.root.1
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc       529 Oct 21 17:58 boinc_task_state.xml
[2025-10-21 17:59:28] -rw------- 1 boinc boinc      1016 Oct 21 17:59 memory_monitor_summary.json
[2025-10-21 17:59:28] -rw------- 1 boinc boinc    244836 Oct 21 17:59 log.46809188._003942.job.log.tgz.1
[2025-10-21 17:59:28] -rw------- 1 boinc boinc      7746 Oct 21 17:59 heartbeat.json
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc      8192 Oct 21 17:59 boinc_mmap_file
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc        27 Oct 21 17:59 wrapper_checkpoint.txt
[2025-10-21 17:59:28] -rw------- 1 boinc boinc      4742 Oct 21 17:59 pilotlog.txt
[2025-10-21 17:59:28] -rw------- 1 boinc boinc    590570 Oct 21 17:59 log.46809188._003942.job.log.1
[2025-10-21 17:59:28] -rw------- 1 boinc boinc       357 Oct 21 17:59 output.list
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc       620 Oct 21 17:59 runtime_log
[2025-10-21 17:59:28] -rw------- 1 boinc boinc    849920 Oct 21 17:59 result.tar.gz
[2025-10-21 17:59:28] -rw------- 1 boinc boinc       662 Oct 21 17:59 us9NDmECGV8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6TeMDmBzuUgn.diag
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc      8797 Oct 21 17:59 runtime_log.err
[2025-10-21 17:59:28] -rw-r--r-- 1 boinc boinc      9119 Oct 21 17:59 stderr.txt
[2025-10-21 17:59:28] HITS file was successfully produced:
[2025-10-21 17:59:28] -rw------- 1 boinc boinc 148998369 Oct 21 17:58 shared/HITS.pool.root.1
[2025-10-21 17:59:28]  *** Contents of shared directory: ***
[2025-10-21 17:59:28] total 333672
[2025-10-21 17:59:28] -rw-r--r-- 2 boinc boinc 191226223 Oct 21 16:53 ATLAS.root_0
[2025-10-21 17:59:28] -rw-r--r-- 2 boinc boinc    569665 Oct 21 16:53 input.tar.gz
[2025-10-21 17:59:28] -rw-r--r-- 2 boinc boinc     15120 Oct 21 16:53 start_atlas.sh
[2025-10-21 17:59:28] -rw------- 1 boinc boinc 148998369 Oct 21 17:58 HITS.pool.root.1
[2025-10-21 17:59:28] -rw------- 1 boinc boinc    849920 Oct 21 17:59 result.tar.gz
17:59:30 (211967): run_atlas exited; CPU time 11184.803969
17:59:30 (211967): called boinc_finish(0)

</stderr_txt>
]]>

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