Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:45:15 (58335): wrapper (7.7.26015): starting
10:45:15 (58335): wrapper: running run_atlas (--nthreads 2)
[2025-10-21 10:45:15] Arguments: --nthreads 2
[2025-10-21 10:45:15] Threads: 2
[2025-10-21 10:45:15] Checking for CVMFS
[2025-10-21 10:45:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 10:45:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 10:45:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 10:45:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 10:45:17] 2.11.0.0 29055 9 36672 151951 2 186 3133281 4194304 0 130560 0 91175 99.998 1361 546 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-21 10:45:17] CVMFS is ok
[2025-10-21 10:45:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 10:45:17] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-21 10:45:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-21 10:45:17] Further information can be found at the LHC@home message board.
[2025-10-21 10:45:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 10:45:17] Checking for apptainer binary...
[2025-10-21 10:45:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 10:45:17] Running /usr/bin/apptainer --version
[2025-10-21 10:45:19] apptainer version 1.2.2-1.el8
[2025-10-21 10:45:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 10:45:19] bottom
[2025-10-21 10:45:19] apptainer works
[2025-10-21 10:45:20] Set ATHENA_PROC_NUMBER=2
[2025-10-21 10:45:20] Set ATHENA_CORE_NUMBER=2
[2025-10-21 10:45:20] Starting ATLAS job with PandaID=6852941079
[2025-10-21 10:45:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 10:53:49]  *** The last 200 lines of the pilot log: ***
[2025-10-21 10:53:49] 2025-10-21 08:52:56,725 | INFO     | memory summary dictionary not yet available
[2025-10-21 10:53:49] 2025-10-21 08:52:56,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 10:53:49] 2025-10-21 08:52:56,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | could have reported an average CPU frequency of 1765 MHz (4 samples)
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | ..............................
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | . Timing measurements:
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | . get job = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | . initial setup = 3 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . payload setup = 11 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . stage-in = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . payload execution = 213 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . stage-out = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . log creation = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | ..............................
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-21 10:53:49] 2025-10-21 08:52:56,728 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6852941079/pilotlog.txt
[2025-10-21 10:53:49] 2025-10-21 08:52:56,746 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-21 10:53:49] - Log from pilotlog.txt -
[2025-10-21 10:53:49] 2025-10-21 08:52:56,316 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-21 10:53:49] 2025-10-21 08:52:56,722 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-21 10:53:49] 2025-10-21 08:52:56,723 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-21 10:53:49] 2025-10-21 08:52:56,724 | WARNING  | file does not exist either: /var/lib/boinc/slots/2/PanDA_Pilot-6852941079/memory_monitor_output.txt
[2025-10-21 10:53:49] 2025-10-21 08:52:56,725 | INFO     | memory summary dictionary not yet available
[2025-10-21 10:53:49] 2025-10-21 08:52:56,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 10:53:49] 2025-10-21 08:52:56,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | could have reported an average CPU frequency of 1765 MHz (4 samples)
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | ..............................
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | . Timing measurements:
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | . get job = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | . initial setup = 3 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . payload setup = 11 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . stage-in = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . payload execution = 213 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . stage-out = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . log creation = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | ..............................
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-21 10:53:49] 2025-10-21 08:52:56,728 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6852941079/pilotlog.txt
[2025-10-21 10:53:49] 2025-10-21 08:52:56,747 | WARNING  | 
[2025-10-21 10:53:49] [begin log extracts]
[2025-10-21 10:53:49] - Log from pilotlog.txt -
[2025-10-21 10:53:49] 2025-10-21 08:52:56,316 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-21 10:53:49] 2025-10-21 08:52:56,722 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-21 10:53:49] 2025-10-21 08:52:56,723 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-21 10:53:49] 2025-10-21 08:52:56,724 | WARNING  | file does not exist either: /var/lib/boinc/slots/2/PanDA_Pilot-6852941079/memory_monitor_output.txt
[2025-10-21 10:53:49] 2025-10-21 08:52:56,725 | INFO     | memory summary dictionary not yet available
[2025-10-21 10:53:49] 2025-10-21 08:52:56,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 10:53:49] 2025-10-21 08:52:56,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | could have reported an average CPU frequency of 1765 MHz (4 samples)
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | ..............................
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | . Timing measurements:
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | . get job = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,726 | INFO     | . initial setup = 3 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . payload setup = 11 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . stage-in = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . payload execution = 213 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . stage-out = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | . log creation = 0 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | ..............................
[2025-10-21 10:53:49] 2025-10-21 08:52:56,727 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-21 10:53:49] 2025-10-21 08:52:56,728 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6852941079/pilotlog.txt
[2025-10-21 10:53:49] [end log extracts]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,747 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-21 10:53:49] 2025-10-21 08:52:56,748 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-21 10:53:49] 2025-10-21 08:52:56,875 | INFO     | 
[2025-10-21 10:53:49] 2025-10-21 08:52:56,875 | INFO     | job summary report
[2025-10-21 10:53:49] 2025-10-21 08:52:56,875 | INFO     | --------------------------------------------------
[2025-10-21 10:53:49] 2025-10-21 08:52:56,875 | INFO     | PanDA job id: 6852941079
[2025-10-21 10:53:49] 2025-10-21 08:52:56,875 | INFO     | task id: 46771637
[2025-10-21 10:53:49] 2025-10-21 08:52:56,876 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-21 10:49:40,127 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-21 10:53:49] 2025-10-21 08:52:56,876 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 10:53:49] 2025-10-21 08:52:56,876 | INFO     | pilot state: failed 
[2025-10-21 10:53:49] 2025-10-21 08:52:56,876 | INFO     | transexitcode: 65
[2025-10-21 10:53:49] 2025-10-21 08:52:56,876 | INFO     | exeerrorcode: 65
[2025-10-21 10:53:49] 2025-10-21 08:52:56,876 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-21 10:53:49] 2025-10-21 08:52:56,876 | INFO     | exitcode: 65
[2025-10-21 10:53:49] 2025-10-21 08:52:56,877 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-21 10:53:49] 2025-10-21 08:52:56,877 | INFO     | cpuconsumptiontime: 151 s
[2025-10-21 10:53:49] 2025-10-21 08:52:56,877 | INFO     | nevents: 0
[2025-10-21 10:53:49] 2025-10-21 08:52:56,877 | INFO     | neventsw: 0
[2025-10-21 10:53:49] 2025-10-21 08:52:56,877 | INFO     | pid: 68463
[2025-10-21 10:53:49] 2025-10-21 08:52:56,877 | INFO     | pgrp: 68463
[2025-10-21 10:53:49] 2025-10-21 08:52:56,877 | INFO     | corecount: 2
[2025-10-21 10:53:49] 2025-10-21 08:52:56,877 | INFO     | event service: False
[2025-10-21 10:53:49] 2025-10-21 08:52:56,878 | INFO     | sizes: {0: 2348703, 1: 2348958, 2: 2348958, 8: 2349248, 12: 2349276, 289: 2372778, 290: 2377129, 417: 2377267}
[2025-10-21 10:53:49] 2025-10-21 08:52:56,878 | INFO     | --------------------------------------------------
[2025-10-21 10:53:49] 2025-10-21 08:52:56,878 | INFO     | 
[2025-10-21 10:53:49] 2025-10-21 08:52:56,878 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-21 10:53:49] 2025-10-21 08:52:56,905 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,907 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,907 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,907 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 10:53:49] 2025-10-21 08:52:56,908 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,908 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 10:53:49] 2025-10-21 08:52:56,908 | INFO     | job 6852941079 has completed (purged errors)
[2025-10-21 10:53:49] 2025-10-21 08:52:56,908 | INFO     | overall cleanup function is called
[2025-10-21 10:53:49] 2025-10-21 08:52:57,996 | INFO     | --- collectZombieJob: --- 10, [68463]
[2025-10-21 10:53:49] 2025-10-21 08:52:57,997 | INFO     | zombie collector waiting for pid 68463
[2025-10-21 10:53:49] 2025-10-21 08:52:57,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 10:53:49] 2025-10-21 08:52:57,997 | INFO     | collected zombie processes
[2025-10-21 10:53:49] 2025-10-21 08:52:57,997 | INFO     | will attempt to kill all subprocesses of pid=68463
[2025-10-21 10:53:49] 2025-10-21 08:52:58,069 | INFO     | process IDs to be killed: [68463] (in reverse order)
[2025-10-21 10:53:49] 2025-10-21 08:52:58,116 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 10:53:49] 2025-10-21 08:52:58,117 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 10:53:49] 2025-10-21 08:52:58,120 | INFO     | did not find any defunct processes belonging to 68463
[2025-10-21 10:53:49] 2025-10-21 08:52:58,123 | INFO     | did not find any defunct processes belonging to 68463
[2025-10-21 10:53:49] 2025-10-21 08:52:58,123 | INFO     | ready for new job
[2025-10-21 10:53:49] 2025-10-21 08:52:58,124 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 10:53:49] 2025-10-21 08:52:58,125 | INFO     | ***************************************
[2025-10-21 10:53:49] 2025-10-21 08:52:58,125 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 10:53:49] 2025-10-21 08:52:58,126 | INFO     | ***************************************
[2025-10-21 10:53:49] 2025-10-21 08:52:58,126 | INFO     | 
[2025-10-21 10:53:49] 2025-10-21 08:52:58,138 | INFO     | architecture information:
[2025-10-21 10:53:49] 2025-10-21 08:52:58,138 | INFO     | executing command: cat /etc/os-release
[2025-10-21 10:53:49] 2025-10-21 08:52:58,158 | INFO     | cat /etc/os-release:
[2025-10-21 10:53:49] NAME="CentOS Linux"
[2025-10-21 10:53:49] VERSION="7 (Core)"
[2025-10-21 10:53:49] ID="centos"
[2025-10-21 10:53:49] ID_LIKE="rhel fedora"
[2025-10-21 10:53:49] VERSION_ID="7"
[2025-10-21 10:53:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 10:53:49] ANSI_COLOR="0;31"
[2025-10-21 10:53:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 10:53:49] HOME_URL="https://www.centos.org/"
[2025-10-21 10:53:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 10:53:49] 
[2025-10-21 10:53:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 10:53:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 10:53:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 10:53:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 10:53:49] 
[2025-10-21 10:53:49] 2025-10-21 08:52:58,159 | INFO     | ***************************************
[2025-10-21 10:53:49] 2025-10-21 08:52:58,662 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-21 10:53:49] 2025-10-21 08:52:58,681 | INFO     | sufficient remaining disk space (213281406976 B)
[2025-10-21 10:53:49] 2025-10-21 08:52:58,682 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 10:53:49] 2025-10-21 08:52:58,682 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 10:53:49] 2025-10-21 08:52:58,682 | INFO     | update_server=False
[2025-10-21 10:53:49] 2025-10-21 08:52:58,682 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 10:53:49] 2025-10-21 08:52:58,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 10:53:49] 2025-10-21 08:52:58,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 10:53:49] 2025-10-21 08:52:58,683 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 10:53:49] 2025-10-21 08:52:58,797 | INFO     | all payload control threads have been joined
[2025-10-21 10:53:49] 2025-10-21 08:52:58,819 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-21 10:53:49] 2025-10-21 08:52:58,819 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-21 10:53:49] 2025-10-21 08:52:58,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 10:53:49] 2025-10-21 08:52:58,819 | INFO     | will abort loop
[2025-10-21 10:53:49] 2025-10-21 08:52:59,211 | INFO     | all job control threads have been joined
[2025-10-21 10:53:49] 2025-10-21 08:52:59,464 | INFO     | all data control threads have been joined
[2025-10-21 10:53:49] 2025-10-21 08:52:59,688 | INFO     | [job] retrieve thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:52:59,689 | INFO     | [job] queue monitor thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:52:59,754 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:52:59,803 | INFO     | [payload] control thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:52:59,825 | INFO     | [job] job monitor thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:00,038 | INFO     | [payload] validate_post thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:00,143 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:00,217 | INFO     | [job] control thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:00,242 | INFO     | [data] copytool_in thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:00,330 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:00,470 | INFO     | [data] control thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:00,552 | INFO     | [job] validate thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:00,688 | INFO     | [data] copytool_out thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:00,888 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:01,161 | INFO     | [payload] failed_post thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:02,685 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 10:53:49] 2025-10-21 08:53:29,232 | INFO     | PID=61959 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 10:53:49] 2025-10-21 08:53:29,233 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 10:53:49] 2025-10-21 08:53:29,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 10:53:49] 2025-10-21 08:53:29,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 10:53:49] 2025-10-21 08:53:41,944 | INFO     | [monitor] cgroup control has ended
[2025-10-21 10:53:49] 2025-10-21 08:53:44,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140373467715392)>', '<ExcThread(monitor, started 140372776822528)>']
[2025-10-21 10:53:49] 2025-10-21 08:53:44,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 10:53:49] 2025-10-21 08:53:44,307 | INFO     | [monitor] control thread has ended
[2025-10-21 10:53:49] 2025-10-21 08:53:49,046 | INFO     | all workflow threads have been joined
[2025-10-21 10:53:49] 2025-10-21 08:53:49,046 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 10:53:49] 2025-10-21 08:53:49,047 | INFO     | traces error code: 0
[2025-10-21 10:53:49] 2025-10-21 08:53:49,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 10:53:49] 2025-10-21 08:53:49,263 [wrapper] ==== pilot stdout END ====
[2025-10-21 10:53:49] 2025-10-21 08:53:49,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 10:53:49] 2025-10-21 08:53:49,271 [wrapper] pilotpid: 61959
[2025-10-21 10:53:49] 2025-10-21 08:53:49,274 [wrapper] Pilot exit status: 0
[2025-10-21 10:53:49] 2025-10-21 08:53:49,339 [wrapper] pandaids: 6852941079
[2025-10-21 10:53:49] 2025-10-21 08:53:49,369 [wrapper] cleanup supervisor_pilot   61965 61960
[2025-10-21 10:53:49] 2025-10-21 08:53:49,373 [wrapper] Test setup, not cleaning
[2025-10-21 10:53:49] 2025-10-21 08:53:49,377 [wrapper] apfmon messages muted
[2025-10-21 10:53:49] 2025-10-21 08:53:49,380 [wrapper] ==== wrapper stdout END ====
[2025-10-21 10:53:49] 2025-10-21 08:53:49,384 [wrapper] ==== wrapper stderr END ====
[2025-10-21 10:53:49]  *** Error codes and diagnostics ***
[2025-10-21 10:53:49]     "exeErrorCode": 65,
[2025-10-21 10:53:49]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-21 10:53:49]     "pilotErrorCode": 1305,
[2025-10-21 10:53:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-21 10:53:49]  *** Listing of results directory ***
[2025-10-21 10:53:49] total 224668
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc    557409 Oct 20 22:52 pilot3.tar.gz
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc      5112 Oct 20 23:28 queuedata.json
[2025-10-21 10:53:49] -rwx------ 1 boinc boinc     36292 Oct 20 23:31 runpilot2-wrapper.sh
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc       100 Oct 21 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 10:53:49] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 10:45 run_atlas
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc       105 Oct 21 10:45 job.xml
[2025-10-21 10:53:49] -rw-r--r-- 2 boinc boinc 225746035 Oct 21 10:45 EVNT.46771634._000993.pool.root.1
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc      5983 Oct 21 10:45 init_data.xml
[2025-10-21 10:53:49] -rw-r--r-- 2 boinc boinc    569683 Oct 21 10:45 input.tar.gz
[2025-10-21 10:53:49] drwxrwx--x 2 boinc boinc        68 Oct 21 10:45 shared
[2025-10-21 10:53:49] -rw-r--r-- 2 boinc boinc     15120 Oct 21 10:45 start_atlas.sh
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc         0 Oct 21 10:45 boinc_lockfile
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc      2560 Oct 21 10:45 pandaJob.out
[2025-10-21 10:53:49] -rw------- 1 boinc boinc    978830 Oct 21 10:45 agis_schedconf.cvmfs.json
[2025-10-21 10:53:49] -rw------- 1 boinc boinc   1560740 Oct 21 10:45 agis_ddmendpoints.agis.ALL.json
[2025-10-21 10:53:49] drwx------ 5 boinc boinc      4096 Oct 21 10:45 pilot3
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc       524 Oct 21 10:49 boinc_task_state.xml
[2025-10-21 10:53:49] -rw------- 1 boinc boinc     48418 Oct 21 10:50 log.46771637._051201.job.log.tgz.1
[2025-10-21 10:53:49] -rw------- 1 boinc boinc        95 Oct 21 10:52 pilot_heartbeat.json
[2025-10-21 10:53:49] -rw------- 1 boinc boinc      8061 Oct 21 10:52 heartbeat.json
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc        23 Oct 21 10:53 wrapper_checkpoint.txt
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc      8192 Oct 21 10:53 boinc_mmap_file
[2025-10-21 10:53:49] -rw------- 1 boinc boinc      4933 Oct 21 10:53 pilotlog.txt
[2025-10-21 10:53:49] -rw------- 1 boinc boinc    166628 Oct 21 10:53 log.46771637._051201.job.log.1
[2025-10-21 10:53:49] -rw------- 1 boinc boinc       188 Oct 21 10:53 output.list
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc       620 Oct 21 10:53 runtime_log
[2025-10-21 10:53:49] -rw------- 1 boinc boinc    235520 Oct 21 10:53 result.tar.gz
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc      8505 Oct 21 10:53 runtime_log.err
[2025-10-21 10:53:49] -rw------- 1 boinc boinc       640 Oct 21 10:53 lseKDmjeCV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFodMDmzowMHn.diag
[2025-10-21 10:53:49] -rw-r--r-- 1 boinc boinc     21851 Oct 21 10:53 stderr.txt
[2025-10-21 10:53:49] No HITS result produced
[2025-10-21 10:53:49]  *** Contents of shared directory: ***
[2025-10-21 10:53:49] total 221264
[2025-10-21 10:53:49] -rw-r--r-- 2 boinc boinc 225746035 Oct 21 10:45 ATLAS.root_0
[2025-10-21 10:53:49] -rw-r--r-- 2 boinc boinc    569683 Oct 21 10:45 input.tar.gz
[2025-10-21 10:53:49] -rw-r--r-- 2 boinc boinc     15120 Oct 21 10:45 start_atlas.sh
[2025-10-21 10:53:49] -rw------- 1 boinc boinc    235520 Oct 21 10:53 result.tar.gz
10:53:51 (58335): run_atlas exited; CPU time 135.798901
10:53:51 (58335): called boinc_finish(0)

</stderr_txt>
]]>

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