Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:12:29 (938941): wrapper (7.7.26015): starting
12:12:29 (938941): wrapper: running run_atlas (--nthreads 3)
[2025-10-21 12:12:29] Arguments: --nthreads 3
[2025-10-21 12:12:29] Threads: 3
[2025-10-21 12:12:29] Checking for CVMFS
[2025-10-21 12:12:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 12:12:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 12:12:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 12:12:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 12:12:29] 2.9.2.0 788955 528 68756 151953 0 57 31118176 36864000 0 130560 0 394367 99.987 18774 1822 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 12:12:29] CVMFS is ok
[2025-10-21 12:12:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 12:12:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 12:12:29] Further information can be found at the LHC@home message board.
[2025-10-21 12:12:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 12:12:29] Checking for apptainer binary...
[2025-10-21 12:12:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 12:12:29] Running /usr/bin/apptainer --version
[2025-10-21 12:12:29] apptainer version 1.4.1-1.1
[2025-10-21 12:12:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 12:12:29] magicA161
[2025-10-21 12:12:29] apptainer works
[2025-10-21 12:12:29] Set ATHENA_PROC_NUMBER=3
[2025-10-21 12:12:29] Set ATHENA_CORE_NUMBER=3
[2025-10-21 12:12:29] Starting ATLAS job with PandaID=6852961570
[2025-10-21 12:12:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 13:43:09]  *** The last 200 lines of the pilot log: ***
[2025-10-21 13:43:09] 2025-10-21 11:42:38,538 | INFO     | ready for new job
[2025-10-21 13:43:09] 2025-10-21 11:42:38,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 13:43:09] 2025-10-21 11:42:38,538 | INFO     | ***************************************
[2025-10-21 13:43:09] 2025-10-21 11:42:38,538 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 13:43:09] 2025-10-21 11:42:38,538 | INFO     | ***************************************
[2025-10-21 13:43:09] 2025-10-21 11:42:38,539 | INFO     | 
[2025-10-21 13:43:09] 2025-10-21 11:42:38,539 | INFO     | architecture information:
[2025-10-21 13:43:09] 2025-10-21 11:42:38,539 | INFO     | executing command: cat /etc/os-release
[2025-10-21 13:43:09] 2025-10-21 11:42:38,548 | INFO     | cat /etc/os-release:
[2025-10-21 13:43:09] NAME="CentOS Linux"
[2025-10-21 13:43:09] VERSION="7 (Core)"
[2025-10-21 13:43:09] ID="centos"
[2025-10-21 13:43:09] ID_LIKE="rhel fedora"
[2025-10-21 13:43:09] VERSION_ID="7"
[2025-10-21 13:43:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 13:43:09] ANSI_COLOR="0;31"
[2025-10-21 13:43:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 13:43:09] HOME_URL="https://www.centos.org/"
[2025-10-21 13:43:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 13:43:09] 
[2025-10-21 13:43:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 13:43:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 13:43:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 13:43:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 13:43:09] 
[2025-10-21 13:43:09] 2025-10-21 11:42:38,548 | INFO     | ***************************************
[2025-10-21 13:43:09] 2025-10-21 11:42:39,051 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-21 13:43:09] 2025-10-21 11:42:39,065 | INFO     | sufficient remaining disk space (373705146368 B)
[2025-10-21 13:43:09] 2025-10-21 11:42:39,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 13:43:09] 2025-10-21 11:42:39,065 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 13:43:09] 2025-10-21 11:42:39,065 | INFO     | update_server=False
[2025-10-21 13:43:09] 2025-10-21 11:42:39,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 13:43:09] 2025-10-21 11:42:39,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 13:43:09] 2025-10-21 11:42:39,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 13:43:09] 2025-10-21 11:42:39,066 | INFO     | aborting loop
[2025-10-21 13:43:09] 2025-10-21 11:42:39,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 13:43:09] 2025-10-21 11:42:39,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 13:43:09] 2025-10-21 11:42:39,100 | INFO     | all data control threads have been joined
[2025-10-21 13:43:09] 2025-10-21 11:42:39,110 | INFO     | all job control threads have been joined
[2025-10-21 13:43:09] 2025-10-21 11:42:39,373 | INFO     | all payload control threads have been joined
[2025-10-21 13:43:09] 2025-10-21 11:42:40,071 | INFO     | [job] job monitor thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:40,071 | INFO     | [job] retrieve thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:40,071 | INFO     | [job] queue monitor thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:40,105 | INFO     | [data] control thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:40,115 | INFO     | [job] control thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:40,155 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:40,233 | INFO     | [payload] failed_post thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:40,379 | INFO     | [payload] control thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:40,765 | INFO     | [payload] validate_post thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:41,071 | INFO     | [data] copytool_out thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:41,125 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:41,224 | INFO     | [data] copytool_in thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:41,516 | INFO     | [job] validate thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:41,564 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:42,678 | INFO     | [monitor] cgroup control has ended
[2025-10-21 13:43:09] 2025-10-21 11:42:43,070 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:49,700 | INFO     | job.realtimelogging is not enabled
[2025-10-21 13:43:09] 2025-10-21 11:42:50,706 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 13:43:09] 2025-10-21 11:42:51,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139759339956032)>', '<ExcThread(monitor, started 139758554568448)>']
[2025-10-21 13:43:09] 2025-10-21 11:42:56,995 | INFO     | all workflow threads have been joined
[2025-10-21 13:43:09] 2025-10-21 11:42:56,996 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 13:43:09] 2025-10-21 11:42:56,996 | INFO     | traces error code: 0
[2025-10-21 13:43:09] 2025-10-21 11:42:56,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 13:43:09] 2025-10-21 11:43:09,655 | INFO     | PID=942667 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 13:43:09] 2025-10-21 11:43:09,656 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 13:43:09] 2025-10-21 11:43:09,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 13:43:09] 2025-10-21 11:43:09,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 13:43:09] 2025-10-21 11:43:09,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 13:43:09] 2025-10-21 11:43:09,656 | INFO     | [monitor] control thread has ended
[2025-10-21 13:43:09] 2025-10-21 11:43:09,702 [wrapper] ==== pilot stdout END ====
[2025-10-21 13:43:09] 2025-10-21 11:43:09,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 13:43:09] 2025-10-21 11:43:09,707 [wrapper] pilotpid: 942667
[2025-10-21 13:43:09] 2025-10-21 11:43:09,710 [wrapper] Pilot exit status: 0
[2025-10-21 13:43:09] 2025-10-21 11:43:09,717 [wrapper] pandaids: 6852961570
[2025-10-21 13:43:09] 2025-10-21 11:43:09,734 [wrapper] cleanup supervisor_pilot  961903 942668
[2025-10-21 13:43:09] 2025-10-21 11:43:09,737 [wrapper] Test setup, not cleaning
[2025-10-21 13:43:09] 2025-10-21 11:43:09,739 [wrapper] apfmon messages muted
[2025-10-21 13:43:09] 2025-10-21 11:43:09,742 [wrapper] ==== wrapper stdout END ====
[2025-10-21 13:43:09] 2025-10-21 11:43:09,744 [wrapper] ==== wrapper stderr END ====
[2025-10-21 13:43:09]  *** Error codes and diagnostics ***
[2025-10-21 13:43:09]     "exeErrorCode": 0,
[2025-10-21 13:43:09]     "exeErrorDiag": "",
[2025-10-21 13:43:09]     "pilotErrorCode": 0,
[2025-10-21 13:43:09]     "pilotErrorDiag": "",
[2025-10-21 13:43:09]  *** Listing of results directory ***
[2025-10-21 13:43:09] total 435196
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc    557409 Oct 21 03:53 pilot3.tar.gz
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc      5112 Oct 21 04:37 queuedata.json
[2025-10-21 13:43:09] -rwx------ 1 boinc boinc     36292 Oct 21 04:40 runpilot2-wrapper.sh
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc       100 Oct 21 12:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 13:43:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 12:12 run_atlas
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc       105 Oct 21 12:12 job.xml
[2025-10-21 13:43:09] -rw-r--r-- 2 boinc boinc 228903088 Oct 21 12:12 EVNT.46771634._002348.pool.root.1
[2025-10-21 13:43:09] -rw-r--r-- 2 boinc boinc    569678 Oct 21 12:12 input.tar.gz
[2025-10-21 13:43:09] -rw-r--r-- 2 boinc boinc     15120 Oct 21 12:12 start_atlas.sh
[2025-10-21 13:43:09] drwxrwx--x 2 boinc boinc      4096 Oct 21 12:12 shared
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc         0 Oct 21 12:12 boinc_setup_complete
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc      6449 Oct 21 12:12 init_data.xml
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc         0 Oct 21 12:12 boinc_lockfile
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc      2560 Oct 21 12:12 pandaJob.out
[2025-10-21 13:43:09] -rw------- 1 boinc boinc    978846 Oct 21 12:12 agis_schedconf.cvmfs.json
[2025-10-21 13:43:09] -rw------- 1 boinc boinc   1560740 Oct 21 12:12 agis_ddmendpoints.agis.ALL.json
[2025-10-21 13:43:09] drwx------ 5 boinc boinc      4096 Oct 21 12:12 pilot3
[2025-10-21 13:43:09] -rw------- 1 boinc boinc 210768048 Oct 21 13:42 HITS.46771637._059717.pool.root.1
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc       529 Oct 21 13:42 boinc_task_state.xml
[2025-10-21 13:43:09] -rw------- 1 boinc boinc      1018 Oct 21 13:42 memory_monitor_summary.json
[2025-10-21 13:43:09] -rw------- 1 boinc boinc    251095 Oct 21 13:42 log.46771637._059717.job.log.tgz.1
[2025-10-21 13:43:09] -rw------- 1 boinc boinc      7753 Oct 21 13:42 heartbeat.json
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc      8192 Oct 21 13:42 boinc_mmap_file
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc        27 Oct 21 13:42 wrapper_checkpoint.txt
[2025-10-21 13:43:09] -rw------- 1 boinc boinc       746 Oct 21 13:43 pilotlog.txt
[2025-10-21 13:43:09] -rw------- 1 boinc boinc        95 Oct 21 13:43 pilot_heartbeat.json
[2025-10-21 13:43:09] -rw------- 1 boinc boinc    786971 Oct 21 13:43 log.46771637._059717.job.log.1
[2025-10-21 13:43:09] -rw------- 1 boinc boinc       357 Oct 21 13:43 output.list
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc       620 Oct 21 13:43 runtime_log
[2025-10-21 13:43:09] -rw------- 1 boinc boinc   1054720 Oct 21 13:43 result.tar.gz
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc      8792 Oct 21 13:43 runtime_log.err
[2025-10-21 13:43:09] -rw------- 1 boinc boinc       661 Oct 21 13:43 imXLDmbTHV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGfeMDm9bRwMm.diag
[2025-10-21 13:43:09] -rw-r--r-- 1 boinc boinc      9615 Oct 21 13:43 stderr.txt
[2025-10-21 13:43:09] HITS file was successfully produced:
[2025-10-21 13:43:09] -rw------- 1 boinc boinc 210768048 Oct 21 13:42 shared/HITS.pool.root.1
[2025-10-21 13:43:09]  *** Contents of shared directory: ***
[2025-10-21 13:43:09] total 430988
[2025-10-21 13:43:09] -rw-r--r-- 2 boinc boinc 228903088 Oct 21 12:12 ATLAS.root_0
[2025-10-21 13:43:09] -rw-r--r-- 2 boinc boinc    569678 Oct 21 12:12 input.tar.gz
[2025-10-21 13:43:09] -rw-r--r-- 2 boinc boinc     15120 Oct 21 12:12 start_atlas.sh
[2025-10-21 13:43:09] -rw------- 1 boinc boinc 210768048 Oct 21 13:42 HITS.pool.root.1
[2025-10-21 13:43:09] -rw------- 1 boinc boinc   1054720 Oct 21 13:43 result.tar.gz
13:43:11 (938941): run_atlas exited; CPU time 15523.693185
13:43:11 (938941): called boinc_finish(0)

</stderr_txt>
]]>

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