Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:43:32 (963950): wrapper (7.7.26015): starting
13:43:32 (963950): wrapper: running run_atlas (--nthreads 3)
[2025-10-21 13:43:32] Arguments: --nthreads 3
[2025-10-21 13:43:32] Threads: 3
[2025-10-21 13:43:32] Checking for CVMFS
[2025-10-21 13:43:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 13:43:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 13:43:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 13:43:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 13:43:32] 2.9.2.0 788955 619 71148 151957 1 56 31157384 36864000 0 130560 0 460156 99.987 24037 2286 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 13:43:32] CVMFS is ok
[2025-10-21 13:43:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 13:43:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 13:43:32] Further information can be found at the LHC@home message board.
[2025-10-21 13:43:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 13:43:32] Checking for apptainer binary...
[2025-10-21 13:43:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 13:43:32] Running /usr/bin/apptainer --version
[2025-10-21 13:43:32] apptainer version 1.4.1-1.1
[2025-10-21 13:43:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 13:43:32] magicA161
[2025-10-21 13:43:32] apptainer works
[2025-10-21 13:43:32] Set ATHENA_PROC_NUMBER=3
[2025-10-21 13:43:32] Set ATHENA_CORE_NUMBER=3
[2025-10-21 13:43:32] Starting ATLAS job with PandaID=6853275557
[2025-10-21 13:43:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 14:46:13]  *** The last 200 lines of the pilot log: ***
[2025-10-21 14:46:13] 2025-10-21 12:45:42,759 | INFO     | [monitor] cgroup control has ended
[2025-10-21 14:46:13] 2025-10-21 12:45:42,781 | INFO     | all job control threads have been joined
[2025-10-21 14:46:13] 2025-10-21 12:45:43,159 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 14:46:13] 2025-10-21 12:45:43,159 | INFO     | aborting loop
[2025-10-21 14:46:13] 2025-10-21 12:45:43,340 | INFO     | [job] retrieve thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:43,484 | INFO     | [data] control thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:43,667 | INFO     | all payload control threads have been joined
[2025-10-21 14:46:13] 2025-10-21 12:45:43,728 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:43,786 | INFO     | [job] control thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:44,164 | INFO     | [job] job monitor thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:44,340 | INFO     | [data] copytool_out thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:44,426 | INFO     | [data] copytool_in thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:44,462 | INFO     | [payload] validate_post thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:44,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:44,672 | INFO     | [payload] control thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:44,782 | INFO     | [job] validate thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:44,825 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:44,825 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:44,856 | INFO     | [payload] failed_post thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:45,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 14:46:13] 2025-10-21 12:45:46,286 | INFO     | [job] queue monitor thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:46,341 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 14:46:13] 2025-10-21 12:45:47,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729936205632)>', '<ExcThread(monitor, started 139729303496448)>']
[2025-10-21 14:46:13] 2025-10-21 12:45:52,124 | INFO     | all workflow threads have been joined
[2025-10-21 14:46:13] 2025-10-21 12:45:52,125 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 14:46:13] 2025-10-21 12:45:52,125 | INFO     | traces error code: 0
[2025-10-21 14:46:13] 2025-10-21 12:45:52,125 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 14:46:13] 2025-10-21 12:46:12,903 | INFO     | PID=967661 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 14:46:13] 2025-10-21 12:46:12,903 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 14:46:13] 2025-10-21 12:46:12,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 14:46:13] 2025-10-21 12:46:12,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 14:46:13] 2025-10-21 12:46:12,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 14:46:13] 2025-10-21 12:46:12,903 | INFO     | [monitor] control thread has ended
[2025-10-21 14:46:13] 2025-10-21 12:46:12,949 [wrapper] ==== pilot stdout END ====
[2025-10-21 14:46:13] 2025-10-21 12:46:12,952 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 14:46:13] 2025-10-21 12:46:12,954 [wrapper] pilotpid: 967661
[2025-10-21 14:46:13] 2025-10-21 12:46:12,957 [wrapper] Pilot exit status: 0
[2025-10-21 14:46:13] 2025-10-21 12:46:12,964 [wrapper] pandaids: 6853275557
[2025-10-21 14:46:13] 2025-10-21 12:46:12,982 [wrapper] cleanup supervisor_pilot  983517 967662
[2025-10-21 14:46:13] 2025-10-21 12:46:12,984 [wrapper] Test setup, not cleaning
[2025-10-21 14:46:13] 2025-10-21 12:46:12,986 [wrapper] apfmon messages muted
[2025-10-21 14:46:13] 2025-10-21 12:46:12,989 [wrapper] ==== wrapper stdout END ====
[2025-10-21 14:46:13] 2025-10-21 12:46:12,991 [wrapper] ==== wrapper stderr END ====
[2025-10-21 14:46:13]  *** Error codes and diagnostics ***
[2025-10-21 14:46:13]     "exeErrorCode": 0,
[2025-10-21 14:46:13]     "exeErrorDiag": "",
[2025-10-21 14:46:13]     "pilotErrorCode": 0,
[2025-10-21 14:46:13]     "pilotErrorDiag": "",
[2025-10-21 14:46:13]  *** Listing of results directory ***
[2025-10-21 14:46:13] total 333424
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc    557409 Oct 21 03:53 pilot3.tar.gz
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc      5112 Oct 21 04:22 queuedata.json
[2025-10-21 14:46:13] -rwx------ 1 boinc boinc     36292 Oct 21 04:24 runpilot2-wrapper.sh
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc       100 Oct 21 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 14:46:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 13:43 run_atlas
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc       105 Oct 21 13:43 job.xml
[2025-10-21 14:46:13] -rw-r--r-- 2 boinc boinc 191975222 Oct 21 13:43 EVNT.46809186._000168.pool.root.1
[2025-10-21 14:46:13] -rw-r--r-- 2 boinc boinc    569673 Oct 21 13:43 input.tar.gz
[2025-10-21 14:46:13] -rw-r--r-- 2 boinc boinc     15120 Oct 21 13:43 start_atlas.sh
[2025-10-21 14:46:13] drwxrwx--x 2 boinc boinc      4096 Oct 21 13:43 shared
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc         0 Oct 21 13:43 boinc_setup_complete
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc      6449 Oct 21 13:43 init_data.xml
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc         0 Oct 21 13:43 boinc_lockfile
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc      2492 Oct 21 13:43 pandaJob.out
[2025-10-21 14:46:13] -rw------- 1 boinc boinc    978838 Oct 21 13:43 agis_schedconf.cvmfs.json
[2025-10-21 14:46:13] -rw------- 1 boinc boinc   1560740 Oct 21 13:43 agis_ddmendpoints.agis.ALL.json
[2025-10-21 14:46:13] drwx------ 5 boinc boinc      4096 Oct 21 13:43 pilot3
[2025-10-21 14:46:13] -rw------- 1 boinc boinc 143987560 Oct 21 14:45 HITS.46809188._004409.pool.root.1
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc       529 Oct 21 14:45 boinc_task_state.xml
[2025-10-21 14:46:13] -rw------- 1 boinc boinc      1013 Oct 21 14:45 memory_monitor_summary.json
[2025-10-21 14:46:13] -rw------- 1 boinc boinc    228345 Oct 21 14:45 log.46809188._004409.job.log.tgz.1
[2025-10-21 14:46:13] -rw------- 1 boinc boinc      7748 Oct 21 14:45 heartbeat.json
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc        27 Oct 21 14:46 wrapper_checkpoint.txt
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc      8192 Oct 21 14:46 boinc_mmap_file
[2025-10-21 14:46:13] -rw------- 1 boinc boinc       746 Oct 21 14:46 pilotlog.txt
[2025-10-21 14:46:13] -rw------- 1 boinc boinc        95 Oct 21 14:46 pilot_heartbeat.json
[2025-10-21 14:46:13] -rw------- 1 boinc boinc    560899 Oct 21 14:46 log.46809188._004409.job.log.1
[2025-10-21 14:46:13] -rw------- 1 boinc boinc       357 Oct 21 14:46 output.list
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc       620 Oct 21 14:46 runtime_log
[2025-10-21 14:46:13] -rw------- 1 boinc boinc    808960 Oct 21 14:46 result.tar.gz
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc      8792 Oct 21 14:46 runtime_log.err
[2025-10-21 14:46:13] -rw------- 1 boinc boinc       661 Oct 21 14:46 4S3MDmOEHV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmudeMDmqeT3mn.diag
[2025-10-21 14:46:13] -rw-r--r-- 1 boinc boinc      6827 Oct 21 14:46 stderr.txt
[2025-10-21 14:46:13] HITS file was successfully produced:
[2025-10-21 14:46:13] -rw------- 1 boinc boinc 143987560 Oct 21 14:45 shared/HITS.pool.root.1
[2025-10-21 14:46:13]  *** Contents of shared directory: ***
[2025-10-21 14:46:13] total 329468
[2025-10-21 14:46:13] -rw-r--r-- 2 boinc boinc 191975222 Oct 21 13:43 ATLAS.root_0
[2025-10-21 14:46:13] -rw-r--r-- 2 boinc boinc    569673 Oct 21 13:43 input.tar.gz
[2025-10-21 14:46:13] -rw-r--r-- 2 boinc boinc     15120 Oct 21 13:43 start_atlas.sh
[2025-10-21 14:46:13] -rw------- 1 boinc boinc 143987560 Oct 21 14:45 HITS.pool.root.1
[2025-10-21 14:46:13] -rw------- 1 boinc boinc    808960 Oct 21 14:46 result.tar.gz
14:46:14 (963950): run_atlas exited; CPU time 10516.957283
14:46:14 (963950): called boinc_finish(0)

</stderr_txt>
]]>

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