Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:13:17 (2123735): wrapper (7.7.26015): starting
14:13:17 (2123735): wrapper: running run_atlas (--nthreads 4)
[2025-10-21 14:13:17] Arguments: --nthreads 4
[2025-10-21 14:13:17] Threads: 4
[2025-10-21 14:13:17] Checking for CVMFS
[2025-10-21 14:13:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 14:13:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 14:13:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 14:13:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 14:13:18] 2.9.2.0 1897483 714 77144 151957 3 57 24946034 36864001 0 130560 0 590497 99.989 25411 2245 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 14:13:18] CVMFS is ok
[2025-10-21 14:13:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 14:13:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 14:13:18] Further information can be found at the LHC@home message board.
[2025-10-21 14:13:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 14:13:18] Checking for apptainer binary...
[2025-10-21 14:13:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 14:13:18] Running /usr/bin/apptainer --version
[2025-10-21 14:13:18] apptainer version 1.4.1-1.1
[2025-10-21 14:13:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 14:13:18] cosA131b
[2025-10-21 14:13:18] apptainer works
[2025-10-21 14:13:18] Set ATHENA_PROC_NUMBER=4
[2025-10-21 14:13:18] Set ATHENA_CORE_NUMBER=4
[2025-10-21 14:13:18] Starting ATLAS job with PandaID=6852949505
[2025-10-21 14:13:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 15:34:36]  *** The last 200 lines of the pilot log: ***
[2025-10-21 15:34:36] 2025-10-21 13:33:49,446 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-21 15:34:36] 2025-10-21 13:33:49,446 | WARNING  | maxPSS not found in memory monitor output
[2025-10-21 15:34:36] 2025-10-21 13:33:49,446 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2080811 B
[2025-10-21 15:34:36] 2025-10-21 13:33:49,446 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16028 B
[2025-10-21 15:34:36] 2025-10-21 13:33:49,446 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-21 15:34:36] 2025-10-21 13:33:49,461 | INFO     | sufficient remaining disk space (330697801728 B)
[2025-10-21 15:34:36] 2025-10-21 13:33:49,461 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-21 15:34:36] 2025-10-21 13:33:49,461 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6852949505: 2378870 B (within 2537553920 B limit)
[2025-10-21 15:34:36] 2025-10-21 13:33:49,461 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6852949505/HITS.46771637._055338.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-21 15:34:36] 2025-10-21 13:33:49,461 | INFO     | total size of present files: 0 B (workdir size: 2378870 B)
[2025-10-21 15:34:36] 2025-10-21 13:33:49,461 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6852949505/HITS.46771637._055338.pool.root.1 since it does not exist
[2025-10-21 15:34:36] 2025-10-21 13:33:49,501 | INFO     | number of running child processes to parent process 2134090: 1
[2025-10-21 15:34:36] 2025-10-21 13:33:49,501 | INFO     | maximum number of monitored processes: 6
[2025-10-21 15:34:36] 2025-10-21 13:33:50,909 | INFO     | time since job start (4824s) is within the limit (172800.0s)
[2025-10-21 15:34:36] 2025-10-21 13:33:51,082 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-21 15:34:36] 2025-10-21 13:33:51,126 | INFO     | job 6852949505 has state=finished
[2025-10-21 15:34:36] 2025-10-21 13:33:51,126 | INFO     | preparing for final server update for job 6852949505 in state='finished'
[2025-10-21 15:34:36] 2025-10-21 13:33:51,719 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-21 15:34:36] 2025-10-21 13:33:51,720 | INFO     | this job has now completed (state=finished)
[2025-10-21 15:34:36] 2025-10-21 13:33:51,720 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-21 15:34:36] 2025-10-21 13:33:51,720 | INFO     | log transfer has been attempted: DONE
[2025-10-21 15:34:36] 2025-10-21 13:33:51,720 | INFO     | job 6852949505 has finished - writing final server update
[2025-10-21 15:34:36] 2025-10-21 13:33:51,720 | INFO     | total number of processed events: 400 (read)
[2025-10-21 15:34:36] 2025-10-21 13:33:51,721 | INFO     | executing command: lscpu
[2025-10-21 15:34:36] 2025-10-21 13:33:51,742 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-21 15:34:36] 2025-10-21 13:33:52,005 | INFO     | monitor loop #371: job 0:6852949505 is in state 'finished'
[2025-10-21 15:34:36] 2025-10-21 13:33:52,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 15:34:36] 2025-10-21 13:33:52,916 | INFO     | time since job start (4826s) is within the limit (172800.0s)
[2025-10-21 15:34:36] 2025-10-21 13:33:52,916 | INFO     | 4827s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-21 15:34:36] 2025-10-21 13:33:54,509 | INFO     | monitor loop #372: job 0:6852949505 is in state 'finished'
[2025-10-21 15:34:36] 2025-10-21 13:33:54,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 15:34:36] 2025-10-21 13:33:54,921 | INFO     | time since job start (4828s) is within the limit (172800.0s)
[2025-10-21 15:34:36] 2025-10-21 13:33:56,927 | INFO     | time since job start (4830s) is within the limit (172800.0s)
[2025-10-21 15:34:36] 2025-10-21 13:33:57,013 | INFO     | monitor loop #373: job 0:6852949505 is in state 'finished'
[2025-10-21 15:34:36] 2025-10-21 13:33:57,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 15:34:36] 2025-10-21 13:33:57,038 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-21 15:34:36] 2025-10-21 13:33:57,040 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3528.898062499999
[2025-10-21 15:34:36] 2025-10-21 13:33:57,041 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6852949505/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 15:34:36] 2025-10-21 13:33:57,041 | INFO     | extracted standard info from prmon json
[2025-10-21 15:34:36] 2025-10-21 13:33:57,041 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 15:34:36] 2025-10-21 13:33:57,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 15:34:36] 2025-10-21 13:33:57,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 15:34:36] 2025-10-21 13:33:57,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 15:34:36] 2025-10-21 13:33:57,042 | INFO     | fitting pss+swap vs Time
[2025-10-21 15:34:36] 2025-10-21 13:33:57,042 | INFO     | sum of square deviations: 115715658.0
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | sum of deviations: -2427112713.0
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | mean x: 1761051299.5
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | mean y: 2499266.472222222
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | -- intersect: 36940196991.54259
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | intersect: 36940196991.54259
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | chi2: 0.023117660025090463
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | -- intersect: 36940196991.54259
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | current memory leak: -20.97 B/s (using 72 data points, chi2=0.02)
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | could have reported an average CPU frequency of 3728 MHz (6 samples)
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | ..............................
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | . Timing measurements:
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | . get job = 0 s
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | . initial setup = 1 s
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | . payload setup = 4 s
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | . stage-in = 0 s
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | . payload execution = 4798 s
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | . stage-out = 0 s
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | . log creation = 0 s
[2025-10-21 15:34:36] 2025-10-21 13:33:57,043 | INFO     | ..............................
[2025-10-21 15:34:36] 2025-10-21 13:33:57,512 | INFO     | 
[2025-10-21 15:34:36] 2025-10-21 13:33:57,512 | INFO     | job summary report
[2025-10-21 15:34:36] 2025-10-21 13:33:57,512 | INFO     | --------------------------------------------------
[2025-10-21 15:34:36] 2025-10-21 13:33:57,512 | INFO     | PanDA job id: 6852949505
[2025-10-21 15:34:36] 2025-10-21 13:33:57,512 | INFO     | task id: 46771637
[2025-10-21 15:34:36] 2025-10-21 13:33:57,512 | INFO     | errors: (none)
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | pilot state: finished 
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | transexitcode: 0
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | exeerrorcode: 0
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | exeerrordiag: 
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | exitcode: 0
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | exitmsg: OK
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | cpuconsumptiontime: 18290 s
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | nevents: 400
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | neventsw: 0
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | pid: 2134090
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | pgrp: 2134090
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | corecount: 4
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | event service: False
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | sizes: {0: 2348933, 3: 2349195, 11: 2349223, 4806: 2375582, 4807: 2375581, 4808: 2384641, 4811: 2384853, 4816: 2385047}
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | --------------------------------------------------
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | 
[2025-10-21 15:34:36] 2025-10-21 13:33:57,513 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 15:34:36] 2025-10-21 13:33:57,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 15:34:36] 2025-10-21 13:33:57,536 | INFO     | job 6852949505 has completed (purged errors)
[2025-10-21 15:34:36] 2025-10-21 13:33:57,536 | INFO     | overall cleanup function is called
[2025-10-21 15:34:36] 2025-10-21 13:33:58,542 | INFO     | --- collectZombieJob: --- 10, [2134090]
[2025-10-21 15:34:36] 2025-10-21 13:33:58,543 | INFO     | zombie collector waiting for pid 2134090
[2025-10-21 15:34:36] 2025-10-21 13:33:58,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 15:34:36] 2025-10-21 13:33:58,543 | INFO     | collected zombie processes
[2025-10-21 15:34:36] 2025-10-21 13:33:58,543 | INFO     | will attempt to kill all subprocesses of pid=2134090
[2025-10-21 15:34:36] 2025-10-21 13:33:58,587 | INFO     | process IDs to be killed: [2134090] (in reverse order)
[2025-10-21 15:34:36] 2025-10-21 13:33:58,620 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 15:34:36] 2025-10-21 13:33:58,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 15:34:36] 2025-10-21 13:33:58,622 | INFO     | did not find any defunct processes belonging to 2134090
[2025-10-21 15:34:36] 2025-10-21 13:33:58,623 | INFO     | did not find any defunct processes belonging to 2134090
[2025-10-21 15:34:36] 2025-10-21 13:33:58,623 | INFO     | ready for new job
[2025-10-21 15:34:36] 2025-10-21 13:33:58,623 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 15:34:36] 2025-10-21 13:33:58,624 | INFO     | ***************************************
[2025-10-21 15:34:36] 2025-10-21 13:33:58,624 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 15:34:36] 2025-10-21 13:33:58,624 | INFO     | ***************************************
[2025-10-21 15:34:36] 2025-10-21 13:33:58,624 | INFO     | 
[2025-10-21 15:34:36] 2025-10-21 13:33:58,624 | INFO     | architecture information:
[2025-10-21 15:34:36] 2025-10-21 13:33:58,624 | INFO     | executing command: cat /etc/os-release
[2025-10-21 15:34:36] 2025-10-21 13:33:58,639 | INFO     | cat /etc/os-release:
[2025-10-21 15:34:36] NAME="CentOS Linux"
[2025-10-21 15:34:36] VERSION="7 (Core)"
[2025-10-21 15:34:36] ID="centos"
[2025-10-21 15:34:36] ID_LIKE="rhel fedora"
[2025-10-21 15:34:36] VERSION_ID="7"
[2025-10-21 15:34:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 15:34:36] ANSI_COLOR="0;31"
[2025-10-21 15:34:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 15:34:36] HOME_URL="https://www.centos.org/"
[2025-10-21 15:34:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 15:34:36] 
[2025-10-21 15:34:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 15:34:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 15:34:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 15:34:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 15:34:36] 
[2025-10-21 15:34:36] 2025-10-21 13:33:58,639 | INFO     | ***************************************
[2025-10-21 15:34:36] 2025-10-21 13:33:59,142 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-21 15:34:36] 2025-10-21 13:33:59,159 | INFO     | sufficient remaining disk space (330698850304 B)
[2025-10-21 15:34:36] 2025-10-21 13:33:59,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 15:34:36] 2025-10-21 13:33:59,160 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 15:34:36] 2025-10-21 13:33:59,160 | INFO     | update_server=False
[2025-10-21 15:34:36] 2025-10-21 13:33:59,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 15:34:36] 2025-10-21 13:33:59,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 15:34:36] 2025-10-21 13:33:59,264 | INFO     | all payload control threads have been joined
[2025-10-21 15:34:36] 2025-10-21 13:33:59,466 | INFO     | all job control threads have been joined
[2025-10-21 15:34:36] 2025-10-21 13:33:59,517 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-21 15:34:36] 2025-10-21 13:33:59,517 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-21 15:34:36] 2025-10-21 13:33:59,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 15:34:36] 2025-10-21 13:33:59,517 | INFO     | will abort loop
[2025-10-21 15:34:36] 2025-10-21 13:34:00,161 | INFO     | all data control threads have been joined
[2025-10-21 15:34:36] 2025-10-21 13:34:00,165 | INFO     | [job] retrieve thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:00,171 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:00,250 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:00,259 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:00,269 | INFO     | [payload] control thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:00,471 | INFO     | [job] control thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:00,516 | INFO     | [payload] failed_post thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:00,523 | INFO     | [job] job monitor thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:00,828 | INFO     | [data] copytool_in thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:01,078 | INFO     | [payload] validate_post thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:01,166 | INFO     | [data] copytool_out thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:01,166 | INFO     | [data] control thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:01,363 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:01,585 | INFO     | [job] validate thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:01,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 15:34:36] 2025-10-21 13:34:02,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 15:34:36] 2025-10-21 13:34:03,096 | INFO     | [job] queue monitor thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:05,645 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 15:34:36] 2025-10-21 13:34:30,059 | INFO     | PID=2127532 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 15:34:36] 2025-10-21 13:34:30,059 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 15:34:36] 2025-10-21 13:34:30,059 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 15:34:36] 2025-10-21 13:34:30,059 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 15:34:36] 2025-10-21 13:34:31,161 | INFO     | [monitor] cgroup control has ended
[2025-10-21 15:34:36] 2025-10-21 13:34:31,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716694550336)>', '<ExcThread(monitor, started 140716038661888)>']
[2025-10-21 15:34:36] 2025-10-21 13:34:32,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 15:34:36] 2025-10-21 13:34:32,070 | INFO     | [monitor] control thread has ended
[2025-10-21 15:34:36] 2025-10-21 13:34:36,728 | INFO     | all workflow threads have been joined
[2025-10-21 15:34:36] 2025-10-21 13:34:36,728 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 15:34:36] 2025-10-21 13:34:36,728 | INFO     | traces error code: 0
[2025-10-21 15:34:36] 2025-10-21 13:34:36,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 15:34:36] 2025-10-21 13:34:36,807 [wrapper] ==== pilot stdout END ====
[2025-10-21 15:34:36] 2025-10-21 13:34:36,812 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 15:34:36] 2025-10-21 13:34:36,816 [wrapper] pilotpid: 2127532
[2025-10-21 15:34:36] 2025-10-21 13:34:36,820 [wrapper] Pilot exit status: 0
[2025-10-21 15:34:36] 2025-10-21 13:34:36,832 [wrapper] pandaids: 6852949505
[2025-10-21 15:34:36] 2025-10-21 13:34:36,854 [wrapper] cleanup supervisor_pilot 2146166 2127533
[2025-10-21 15:34:36] 2025-10-21 13:34:36,858 [wrapper] Test setup, not cleaning
[2025-10-21 15:34:36] 2025-10-21 13:34:36,861 [wrapper] apfmon messages muted
[2025-10-21 15:34:36] 2025-10-21 13:34:36,865 [wrapper] ==== wrapper stdout END ====
[2025-10-21 15:34:36] 2025-10-21 13:34:36,869 [wrapper] ==== wrapper stderr END ====
[2025-10-21 15:34:36]  *** Error codes and diagnostics ***
[2025-10-21 15:34:36]     "exeErrorCode": 0,
[2025-10-21 15:34:36]     "exeErrorDiag": "",
[2025-10-21 15:34:36]     "pilotErrorCode": 0,
[2025-10-21 15:34:36]     "pilotErrorDiag": "",
[2025-10-21 15:34:36]  *** Listing of results directory ***
[2025-10-21 15:34:36] total 439748
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc    557409 Oct 21 00:52 pilot3.tar.gz
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc      5112 Oct 21 01:28 queuedata.json
[2025-10-21 15:34:36] -rwx------ 1 boinc boinc     36292 Oct 21 01:28 runpilot2-wrapper.sh
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc       100 Oct 21 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 15:34:36] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 14:13 run_atlas
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc       105 Oct 21 14:13 job.xml
[2025-10-21 15:34:36] -rw-r--r-- 2 boinc boinc 229363498 Oct 21 14:13 EVNT.46771634._002169.pool.root.1
[2025-10-21 15:34:36] drwxrwx--x 2 boinc boinc      4096 Oct 21 14:13 shared
[2025-10-21 15:34:36] -rw-r--r-- 2 boinc boinc    569677 Oct 21 14:13 input.tar.gz
[2025-10-21 15:34:36] -rw-r--r-- 2 boinc boinc     15120 Oct 21 14:13 start_atlas.sh
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc         0 Oct 21 14:13 boinc_setup_complete
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc      6378 Oct 21 14:13 init_data.xml
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc         0 Oct 21 14:13 boinc_lockfile
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc      2559 Oct 21 14:13 pandaJob.out
[2025-10-21 15:34:36] -rw------- 1 boinc boinc    978838 Oct 21 14:13 agis_schedconf.cvmfs.json
[2025-10-21 15:34:36] -rw------- 1 boinc boinc   1560740 Oct 21 14:13 agis_ddmendpoints.agis.ALL.json
[2025-10-21 15:34:36] drwx------ 5 boinc boinc      4096 Oct 21 14:13 pilot3
[2025-10-21 15:34:36] -rw------- 1 boinc boinc 215101604 Oct 21 15:33 HITS.46771637._055338.pool.root.1
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc       529 Oct 21 15:33 boinc_task_state.xml
[2025-10-21 15:34:36] -rw------- 1 boinc boinc      1022 Oct 21 15:33 memory_monitor_summary.json
[2025-10-21 15:34:36] -rw------- 1 boinc boinc    256839 Oct 21 15:33 log.46771637._055338.job.log.tgz.1
[2025-10-21 15:34:36] -rw------- 1 boinc boinc        95 Oct 21 15:33 pilot_heartbeat.json
[2025-10-21 15:34:36] -rw------- 1 boinc boinc      7765 Oct 21 15:33 heartbeat.json
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc      8192 Oct 21 15:34 boinc_mmap_file
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc        27 Oct 21 15:34 wrapper_checkpoint.txt
[2025-10-21 15:34:36] -rw------- 1 boinc boinc      4938 Oct 21 15:34 pilotlog.txt
[2025-10-21 15:34:36] -rw------- 1 boinc boinc    711714 Oct 21 15:34 log.46771637._055338.job.log.1
[2025-10-21 15:34:36] -rw------- 1 boinc boinc       357 Oct 21 15:34 output.list
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc       620 Oct 21 15:34 runtime_log
[2025-10-21 15:34:36] -rw------- 1 boinc boinc    983040 Oct 21 15:34 result.tar.gz
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc      8787 Oct 21 15:34 runtime_log.err
[2025-10-21 15:34:36] -rw------- 1 boinc boinc       660 Oct 21 15:34 DJvLDmJUEV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtEeMDmcyN5Cn.diag
[2025-10-21 15:34:36] -rw-r--r-- 1 boinc boinc     22386 Oct 21 15:34 stderr.txt
[2025-10-21 15:34:36] HITS file was successfully produced:
[2025-10-21 15:34:36] -rw------- 1 boinc boinc 215101604 Oct 21 15:33 shared/HITS.pool.root.1
[2025-10-21 15:34:36]  *** Contents of shared directory: ***
[2025-10-21 15:34:36] total 435596
[2025-10-21 15:34:36] -rw-r--r-- 2 boinc boinc 229363498 Oct 21 14:13 ATLAS.root_0
[2025-10-21 15:34:36] -rw-r--r-- 2 boinc boinc    569677 Oct 21 14:13 input.tar.gz
[2025-10-21 15:34:36] -rw-r--r-- 2 boinc boinc     15120 Oct 21 14:13 start_atlas.sh
[2025-10-21 15:34:36] -rw------- 1 boinc boinc 215101604 Oct 21 15:33 HITS.pool.root.1
[2025-10-21 15:34:36] -rw------- 1 boinc boinc    983040 Oct 21 15:34 result.tar.gz
15:34:38 (2123735): run_atlas exited; CPU time 18305.519674
15:34:38 (2123735): called boinc_finish(0)

</stderr_txt>
]]>

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