Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:33:33 (3437373): wrapper (7.7.26015): starting
10:33:33 (3437373): wrapper: running run_atlas (--nthreads 6)
[2025-10-21 10:33:33] Arguments: --nthreads 6
[2025-10-21 10:33:33] Threads: 6
[2025-10-21 10:33:33] Checking for CVMFS
[2025-10-21 10:33:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 10:33:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 10:33:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 10:33:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 10:33:34] 2.13.2.0 3376554 96 53612 151951 3 57 17509561 81920001 0 130560 0 139929 99.997 3958 7685 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://147.213.204.101:3128 1
[2025-10-21 10:33:34] CVMFS is ok
[2025-10-21 10:33:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 10:33:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 10:33:34] Further information can be found at the LHC@home message board.
[2025-10-21 10:33:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 10:33:34] Checking for apptainer binary...
[2025-10-21 10:33:34] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-10-21 10:33:34] apptainer is not installed, using version from CVMFS
[2025-10-21 10:33:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 10:33:34] monitor-atlas.iep
[2025-10-21 10:33:34] apptainer works
[2025-10-21 10:33:34] Set ATHENA_PROC_NUMBER=6
[2025-10-21 10:33:34] Set ATHENA_CORE_NUMBER=6
[2025-10-21 10:33:34] Starting ATLAS job with PandaID=6852943997
[2025-10-21 10:33:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 11:27:48]  *** The last 200 lines of the pilot log: ***
[2025-10-21 11:27:48]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6852943997/log.46771637._052095.job.log.tgz.1
[2025-10-21 11:27:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/47/log.46771637._052095.job.log.tgz.1
[2025-10-21 11:27:48]  workdir=None
[2025-10-21 11:27:48] ]
[2025-10-21 11:27:48] 2025-10-21 09:26:40,709 | INFO     | transferring file log.46771637._052095.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6852943997/log.46771637._052095.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-21 11:27:48] 2025-10-21 09:26:40,709 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6852943997/log.46771637._052095.job.log.tgz.1 /var/lib/boinc/slots/1/log.46771637._052095.job
[2025-10-21 11:27:48] 2025-10-21 09:26:40,715 | INFO     | adding to output.list: log.46771637._052095.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/47/log.46771637._052095.job.log.tg
[2025-10-21 11:27:48] 2025-10-21 09:26:40,716 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-21 11:27:48] 2025-10-21 09:26:40,716 | INFO     | summary of transferred files:
[2025-10-21 11:27:48] 2025-10-21 09:26:40,716 | INFO     |  -- lfn=log.46771637._052095.job.log.tgz.1, status_code=0, status=transferred
[2025-10-21 11:27:48] 2025-10-21 09:26:40,716 | INFO     | stage-out finished correctly
[2025-10-21 11:27:48] 2025-10-21 09:26:40,865 | INFO     | monitor loop #245: job 0:6852943997 is in state 'finished'
[2025-10-21 11:27:48] 2025-10-21 09:26:40,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 11:27:48] 2025-10-21 09:26:40,889 | INFO     | PID=3441058 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 11:27:48] 2025-10-21 09:26:41,889 | INFO     | time since job start (3183s) is within the limit (172800.0s)
[2025-10-21 11:27:48] 2025-10-21 09:26:43,368 | INFO     | monitor loop #246: job 0:6852943997 is in state 'finished'
[2025-10-21 11:27:48] 2025-10-21 09:26:43,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 11:27:48] 2025-10-21 09:26:43,465 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-21 11:27:48] 2025-10-21 09:26:43,895 | INFO     | time since job start (3185s) is within the limit (172800.0s)
[2025-10-21 11:27:48] 2025-10-21 09:26:44,624 | INFO     | job 6852943997 has state=finished
[2025-10-21 11:27:48] 2025-10-21 09:26:44,624 | INFO     | preparing for final server update for job 6852943997 in state='finished'
[2025-10-21 11:27:48] 2025-10-21 09:26:45,669 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-21 11:27:48] 2025-10-21 09:26:45,669 | INFO     | this job has now completed (state=finished)
[2025-10-21 11:27:48] 2025-10-21 09:26:45,669 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-21 11:27:48] 2025-10-21 09:26:45,669 | INFO     | log transfer has been attempted: DONE
[2025-10-21 11:27:48] 2025-10-21 09:26:45,669 | INFO     | job 6852943997 has finished - writing final server update
[2025-10-21 11:27:48] 2025-10-21 09:26:45,669 | INFO     | total number of processed events: 400 (read)
[2025-10-21 11:27:48] 2025-10-21 09:26:45,670 | INFO     | executing command: lscpu
[2025-10-21 11:27:48] 2025-10-21 09:26:45,677 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-21 11:27:48] 2025-10-21 09:26:45,871 | INFO     | monitor loop #247: job 0:6852943997 is in state 'finished'
[2025-10-21 11:27:48] 2025-10-21 09:26:45,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 11:27:48] 2025-10-21 09:26:45,900 | INFO     | time since job start (3187s) is within the limit (172800.0s)
[2025-10-21 11:27:48] 2025-10-21 09:26:47,905 | INFO     | time since job start (3189s) is within the limit (172800.0s)
[2025-10-21 11:27:48] 2025-10-21 09:26:48,374 | INFO     | monitor loop #248: job 0:6852943997 is in state 'finished'
[2025-10-21 11:27:48] 2025-10-21 09:26:48,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 11:27:48] 2025-10-21 09:26:49,911 | INFO     | time since job start (3191s) is within the limit (172800.0s)
[2025-10-21 11:27:48] 2025-10-21 09:26:50,490 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-21 11:27:48] 2025-10-21 09:26:50,490 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4317.060166666666
[2025-10-21 11:27:48] 2025-10-21 09:26:50,491 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6852943997/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 11:27:48] 2025-10-21 09:26:50,491 | INFO     | extracted standard info from prmon json
[2025-10-21 11:27:48] 2025-10-21 09:26:50,491 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 11:27:48] 2025-10-21 09:26:50,491 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 11:27:48] 2025-10-21 09:26:50,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 11:27:48] 2025-10-21 09:26:50,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | fitting pss+swap vs Time
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | sum of square deviations: 28242390.0
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | sum of deviations: -4552389618.0
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | mean x: 1761037282.0
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | mean y: 2796396.7333333334
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | -- intersect: 283864319429.58356
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | intersect: 283864319429.58356
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | chi2: 0.0965906228926163
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | -- intersect: 283864319429.58356
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | current memory leak: -161.19 B/s (using 45 data points, chi2=0.10)
[2025-10-21 11:27:48] 2025-10-21 09:26:50,492 | INFO     | could have reported an average CPU frequency of 4303 MHz (5 samples)
[2025-10-21 11:27:48] 2025-10-21 09:26:50,493 | INFO     | ..............................
[2025-10-21 11:27:48] 2025-10-21 09:26:50,493 | INFO     | . Timing measurements:
[2025-10-21 11:27:48] 2025-10-21 09:26:50,493 | INFO     | . get job = 0 s
[2025-10-21 11:27:48] 2025-10-21 09:26:50,493 | INFO     | . initial setup = 1 s
[2025-10-21 11:27:48] 2025-10-21 09:26:50,493 | INFO     | . payload setup = 2 s
[2025-10-21 11:27:48] 2025-10-21 09:26:50,493 | INFO     | . stage-in = 0 s
[2025-10-21 11:27:48] 2025-10-21 09:26:50,493 | INFO     | . payload execution = 3164 s
[2025-10-21 11:27:48] 2025-10-21 09:26:50,493 | INFO     | . stage-out = 0 s
[2025-10-21 11:27:48] 2025-10-21 09:26:50,493 | INFO     | . log creation = 0 s
[2025-10-21 11:27:48] 2025-10-21 09:26:50,493 | INFO     | ..............................
[2025-10-21 11:27:48] 2025-10-21 09:26:50,523 | INFO     | 
[2025-10-21 11:27:48] 2025-10-21 09:26:50,523 | INFO     | job summary report
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | --------------------------------------------------
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | PanDA job id: 6852943997
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | task id: 46771637
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | errors: (none)
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | pilot state: finished 
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | transexitcode: 0
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | exeerrorcode: 0
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | exeerrordiag: 
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | exitcode: 0
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | exitmsg: OK
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | cpuconsumptiontime: 17775 s
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | nevents: 400
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | neventsw: 0
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | pid: 3447616
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | pgrp: 3447616
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | corecount: 6
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | event service: False
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | sizes: {0: 2348931, 2: 2349193, 11: 2349221, 3170: 2383761, 3173: 2383761, 3180: 2383987}
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | --------------------------------------------------
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | 
[2025-10-21 11:27:48] 2025-10-21 09:26:50,524 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 11:27:48] 2025-10-21 09:26:50,533 | INFO     | job 6852943997 has completed (purged errors)
[2025-10-21 11:27:48] 2025-10-21 09:26:50,533 | INFO     | overall cleanup function is called
[2025-10-21 11:27:48] 2025-10-21 09:26:51,538 | INFO     | --- collectZombieJob: --- 10, [3447616]
[2025-10-21 11:27:48] 2025-10-21 09:26:51,538 | INFO     | zombie collector waiting for pid 3447616
[2025-10-21 11:27:48] 2025-10-21 09:26:51,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 11:27:48] 2025-10-21 09:26:51,539 | INFO     | collected zombie processes
[2025-10-21 11:27:48] 2025-10-21 09:26:51,539 | INFO     | will attempt to kill all subprocesses of pid=3447616
[2025-10-21 11:27:48] 2025-10-21 09:26:51,571 | INFO     | process IDs to be killed: [3447616] (in reverse order)
[2025-10-21 11:27:48] 2025-10-21 09:26:51,588 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 11:27:48] 2025-10-21 09:26:51,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 11:27:48] 2025-10-21 09:26:51,589 | INFO     | did not find any defunct processes belonging to 3447616
[2025-10-21 11:27:48] 2025-10-21 09:26:51,590 | INFO     | did not find any defunct processes belonging to 3447616
[2025-10-21 11:27:48] 2025-10-21 09:26:51,590 | INFO     | ready for new job
[2025-10-21 11:27:48] 2025-10-21 09:26:51,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 11:27:48] 2025-10-21 09:26:51,590 | INFO     | ***************************************
[2025-10-21 11:27:48] 2025-10-21 09:26:51,590 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 11:27:48] 2025-10-21 09:26:51,590 | INFO     | ***************************************
[2025-10-21 11:27:48] 2025-10-21 09:26:51,591 | INFO     | 
[2025-10-21 11:27:48] 2025-10-21 09:26:51,591 | INFO     | architecture information:
[2025-10-21 11:27:48] 2025-10-21 09:26:51,591 | INFO     | executing command: cat /etc/os-release
[2025-10-21 11:27:48] 2025-10-21 09:26:51,596 | INFO     | cat /etc/os-release:
[2025-10-21 11:27:48] NAME="CentOS Linux"
[2025-10-21 11:27:48] VERSION="7 (Core)"
[2025-10-21 11:27:48] ID="centos"
[2025-10-21 11:27:48] ID_LIKE="rhel fedora"
[2025-10-21 11:27:48] VERSION_ID="7"
[2025-10-21 11:27:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 11:27:48] ANSI_COLOR="0;31"
[2025-10-21 11:27:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 11:27:48] HOME_URL="https://www.centos.org/"
[2025-10-21 11:27:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 11:27:48] 
[2025-10-21 11:27:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 11:27:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 11:27:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 11:27:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 11:27:48] 
[2025-10-21 11:27:48] 2025-10-21 09:26:51,596 | INFO     | ***************************************
[2025-10-21 11:27:48] 2025-10-21 09:26:52,099 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-21 11:27:48] 2025-10-21 09:26:52,105 | INFO     | sufficient remaining disk space (872334491648 B)
[2025-10-21 11:27:48] 2025-10-21 09:26:52,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 11:27:48] 2025-10-21 09:26:52,105 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 11:27:48] 2025-10-21 09:26:52,105 | INFO     | update_server=False
[2025-10-21 11:27:48] 2025-10-21 09:26:52,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 11:27:48] 2025-10-21 09:26:52,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 11:27:48] 2025-10-21 09:26:52,106 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 11:27:48] 2025-10-21 09:26:52,106 | INFO     | aborting loop
[2025-10-21 11:27:48] 2025-10-21 09:26:52,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 11:27:48] 2025-10-21 09:26:53,111 | INFO     | [job] retrieve thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:53,111 | INFO     | [job] job monitor thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:53,111 | INFO     | [data] copytool_in thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:53,111 | INFO     | [job] queue monitor thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:53,128 | INFO     | all data control threads have been joined
[2025-10-21 11:27:48] 2025-10-21 09:26:53,250 | INFO     | all payload control threads have been joined
[2025-10-21 11:27:48] 2025-10-21 09:26:53,396 | INFO     | all job control threads have been joined
[2025-10-21 11:27:48] 2025-10-21 09:26:53,740 | INFO     | [payload] failed_post thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:54,007 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 11:27:48] 2025-10-21 09:26:54,111 | INFO     | [data] copytool_out thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:54,133 | INFO     | [data] control thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:54,255 | INFO     | [payload] control thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:54,256 | INFO     | [payload] validate_post thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:54,401 | INFO     | [job] control thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:54,451 | INFO     | [job] validate thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:54,515 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:54,579 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:54,608 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:26:58,013 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:27:02,351 | INFO     | job.realtimelogging is not enabled
[2025-10-21 11:27:48] 2025-10-21 09:27:03,356 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 11:27:48] 2025-10-21 09:27:23,038 | INFO     | PID=3441058 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 11:27:48] 2025-10-21 09:27:23,038 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 11:27:48] 2025-10-21 09:27:23,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 11:27:48] 2025-10-21 09:27:23,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 11:27:48] 2025-10-21 09:27:43,226 | INFO     | [monitor] cgroup control has ended
[2025-10-21 11:27:48] 2025-10-21 09:27:43,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140070695331648)>', '<ExcThread(monitor, started 140070023591680)>']
[2025-10-21 11:27:48] 2025-10-21 09:27:44,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 11:27:48] 2025-10-21 09:27:44,146 | INFO     | [monitor] control thread has ended
[2025-10-21 11:27:48] 2025-10-21 09:27:48,478 | INFO     | all workflow threads have been joined
[2025-10-21 11:27:48] 2025-10-21 09:27:48,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 11:27:48] 2025-10-21 09:27:48,478 | INFO     | traces error code: 0
[2025-10-21 11:27:48] 2025-10-21 09:27:48,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 11:27:48] 2025-10-21 09:27:48,521 [wrapper] ==== pilot stdout END ====
[2025-10-21 11:27:48] 2025-10-21 09:27:48,522 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 11:27:48] 2025-10-21 09:27:48,523 [wrapper] pilotpid: 3441058
[2025-10-21 11:27:48] 2025-10-21 09:27:48,524 [wrapper] Pilot exit status: 0
[2025-10-21 11:27:48] 2025-10-21 09:27:48,527 [wrapper] pandaids: 6852943997
[2025-10-21 11:27:48] 2025-10-21 09:27:48,537 [wrapper] cleanup supervisor_pilot 3463840 3441059
[2025-10-21 11:27:48] 2025-10-21 09:27:48,539 [wrapper] Test setup, not cleaning
[2025-10-21 11:27:48] 2025-10-21 09:27:48,540 [wrapper] apfmon messages muted
[2025-10-21 11:27:48] 2025-10-21 09:27:48,541 [wrapper] ==== wrapper stdout END ====
[2025-10-21 11:27:48] 2025-10-21 09:27:48,542 [wrapper] ==== wrapper stderr END ====
[2025-10-21 11:27:48]  *** Error codes and diagnostics ***
[2025-10-21 11:27:48]     "exeErrorCode": 0,
[2025-10-21 11:27:48]     "exeErrorDiag": "",
[2025-10-21 11:27:48]     "pilotErrorCode": 0,
[2025-10-21 11:27:48]     "pilotErrorDiag": "",
[2025-10-21 11:27:48]  *** Listing of results directory ***
[2025-10-21 11:27:48] total 424864
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc    557409 Oct 20 22:52 pilot3.tar.gz
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc      5112 Oct 20 23:37 queuedata.json
[2025-10-21 11:27:48] -rwx------ 1 boinc boinc     36292 Oct 20 23:39 runpilot2-wrapper.sh
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc       100 Oct 21 10:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 11:27:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 10:33 run_atlas
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc       105 Oct 21 10:33 job.xml
[2025-10-21 11:27:48] -rw-r--r-- 2 boinc boinc     15120 Oct 21 10:33 start_atlas.sh
[2025-10-21 11:27:48] drwxrwx--x 2 boinc boinc        68 Oct 21 10:33 shared
[2025-10-21 11:27:48] -rw-r--r-- 2 boinc boinc    569676 Oct 21 10:33 input.tar.gz
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc      6549 Oct 21 10:33 init_data.xml
[2025-10-21 11:27:48] -rw-r--r-- 2 boinc boinc 226746068 Oct 21 10:33 EVNT.46771634._001029.pool.root.1
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc         0 Oct 21 10:33 boinc_lockfile
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc      2560 Oct 21 10:33 pandaJob.out
[2025-10-21 11:27:48] -rw------- 1 boinc boinc    978830 Oct 21 10:33 agis_schedconf.cvmfs.json
[2025-10-21 11:27:48] -rw------- 1 boinc boinc   1560740 Oct 21 10:33 agis_ddmendpoints.agis.ALL.json
[2025-10-21 11:27:48] drwx------ 5 boinc boinc      4096 Oct 21 10:33 pilot3
[2025-10-21 11:27:48] -rw------- 1 boinc boinc 202909082 Oct 21 11:26 HITS.46771637._052095.pool.root.1
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc       529 Oct 21 11:26 boinc_task_state.xml
[2025-10-21 11:27:48] -rw------- 1 boinc boinc      1021 Oct 21 11:26 memory_monitor_summary.json
[2025-10-21 11:27:48] -rw------- 1 boinc boinc    273079 Oct 21 11:26 log.46771637._052095.job.log.tgz.1
[2025-10-21 11:27:48] -rw------- 1 boinc boinc      7792 Oct 21 11:26 heartbeat.json
[2025-10-21 11:27:48] -rw------- 1 boinc boinc        95 Oct 21 11:27 pilot_heartbeat.json
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc      8192 Oct 21 11:27 boinc_mmap_file
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc        27 Oct 21 11:27 wrapper_checkpoint.txt
[2025-10-21 11:27:48] -rw------- 1 boinc boinc      4821 Oct 21 11:27 pilotlog.txt
[2025-10-21 11:27:48] -rw------- 1 boinc boinc    486670 Oct 21 11:27 log.46771637._052095.job.log.1
[2025-10-21 11:27:48] -rw------- 1 boinc boinc       357 Oct 21 11:27 output.list
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc       620 Oct 21 11:27 runtime_log
[2025-10-21 11:27:48] -rw------- 1 boinc boinc    778240 Oct 21 11:27 result.tar.gz
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc      8716 Oct 21 11:27 runtime_log.err
[2025-10-21 11:27:48] -rw------- 1 boinc boinc       655 Oct 21 11:27 JAULDmLmCV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxtdMDmt0qNkm.diag
[2025-10-21 11:27:48] -rw-r--r-- 1 boinc boinc     22475 Oct 21 11:27 stderr.txt
[2025-10-21 11:27:48] HITS file was successfully produced:
[2025-10-21 11:27:48] -rw------- 1 boinc boinc 202909082 Oct 21 11:26 shared/HITS.pool.root.1
[2025-10-21 11:27:48]  *** Contents of shared directory: ***
[2025-10-21 11:27:48] total 420924
[2025-10-21 11:27:48] -rw-r--r-- 2 boinc boinc     15120 Oct 21 10:33 start_atlas.sh
[2025-10-21 11:27:48] -rw-r--r-- 2 boinc boinc    569676 Oct 21 10:33 input.tar.gz
[2025-10-21 11:27:48] -rw-r--r-- 2 boinc boinc 226746068 Oct 21 10:33 ATLAS.root_0
[2025-10-21 11:27:48] -rw------- 1 boinc boinc 202909082 Oct 21 11:26 HITS.pool.root.1
[2025-10-21 11:27:48] -rw------- 1 boinc boinc    778240 Oct 21 11:27 result.tar.gz
11:27:50 (3437373): run_atlas exited; CPU time 17789.678122
11:27:50 (3437373): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN