Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-20 23:02:54 (16180): vboxwrapper version 26210
2025-10-20 23:02:54 (16180): BOINC client version: 8.2.4
2025-10-20 23:02:55 (16180): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-10-20 23:02:55 (16180): Successfully copied 'init_data.xml' to the shared directory.
2025-10-20 23:02:55 (16180): Create VM. (boinc_00bdf938cb8da723, slot#9)
2025-10-20 23:02:56 (16180): Setting Memory Size for VM. (4300MB)
2025-10-20 23:02:56 (16180): Setting CPU Count for VM. (3)
2025-10-20 23:02:57 (16180): Setting Chipset Options for VM.
2025-10-20 23:02:58 (16180): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-20 23:02:59 (16180): Setting Boot Options for VM.
2025-10-20 23:03:01 (16180): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-20 23:03:01 (16180): Enabling VM Network Access.
2025-10-20 23:03:02 (16180): Disabling USB Support for VM.
2025-10-20 23:03:03 (16180): Disabling COM Port Support for VM.
2025-10-20 23:03:04 (16180): Disabling LPT Port Support for VM.
2025-10-20 23:03:05 (16180): Disabling Audio Support for VM.
2025-10-20 23:03:05 (16180): Disabling Clipboard Support for VM.
2025-10-20 23:03:06 (16180): Disabling Drag and Drop Support for VM.
2025-10-20 23:03:06 (16180): Adding storage controller(s) to VM.
2025-10-20 23:03:07 (16180): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-20 23:03:09 (16180): Adding VirtualBox Guest Additions to VM.
2025-10-20 23:03:09 (16180): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-20 23:03:09 (16180): forwarding host port 61717 to guest port 80
2025-10-20 23:03:10 (16180): Enabling remote desktop for VM.
2025-10-20 23:03:10 (16180): Enabling shared directory for VM.
2025-10-20 23:03:11 (16180): Starting VM using VBoxManage interface. (boinc_00bdf938cb8da723, slot#9)
2025-10-20 23:03:20 (16180): Successfully started VM. (PID = '3136')
2025-10-20 23:03:20 (16180): Reporting VM Process ID to BOINC.
2025-10-20 23:03:20 (16180): Guest Log: BIOS: VirtualBox 7.1.8
2025-10-20 23:03:20 (16180): Guest Log: CPUID EDX: 0x178bfbff
2025-10-20 23:03:20 (16180): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-20 23:03:20 (16180): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-20 23:03:20 (16180): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-20 23:03:20 (16180): Detected: Web Application Enabled (http://localhost:61717)
2025-10-20 23:03:20 (16180): Detected: Remote Desktop Enabled (localhost:61718)
2025-10-20 23:03:20 (16180): Preference change detected
2025-10-20 23:03:20 (16180): Setting CPU throttle for VM. (100%)
2025-10-20 23:03:20 (16180): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-20 23:03:22 (16180): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-20 23:03:22 (16180): Guest Log: BIOS: Booting from Hard Disk...
2025-10-20 23:03:26 (16180): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-20 23:03:26 (16180): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-20 23:03:26 (16180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-20 23:03:42 (16180): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-20 23:03:42 (16180): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-20 23:04:26 (16180): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-20 23:04:26 (16180): Guest Log: 00:00:00.000252 main     Log opened 2025-10-20T23:04:23.707428000Z
2025-10-20 23:04:26 (16180): Guest Log: 00:00:00.000429 main     OS Product: Linux
2025-10-20 23:04:26 (16180): Guest Log: 00:00:00.000489 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-20 23:04:26 (16180): Guest Log: 00:00:00.000591 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-20 23:04:26 (16180): Guest Log: 00:00:00.000649 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-20 23:04:26 (16180): Guest Log: 00:00:00.000651 main     Process ID: 1322
2025-10-20 23:04:26 (16180): Guest Log: 00:00:00.000653 main     Package type: LINUX_64BITS_GENERIC
2025-10-20 23:04:26 (16180): Guest Log: 00:00:00.002445 main     5.2.32 r132073 started. Verbose level = 0
2025-10-20 23:04:26 (16180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-20 23:04:26 (16180): Guest Log: [INFO] Mounting shared directory
2025-10-20 23:04:26 (16180): Guest Log: [INFO] Checking for init_data.xml
2025-10-20 23:04:36 (16180): Guest Log: 00:00:10.007723 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 653 481 000ns (GuestNow=1 761 026 675 367 660 000 ns GuestLast=1 761 001 463 714 179 000 ns fSetTimeLastLoop=true )
2025-10-20 23:05:26 (16180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-20 23:05:26 (16180): Guest Log: [INFO] Detected branch: prod
2025-10-20 23:05:27 (16180): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-20 23:05:27 (16180): Guest Log: Copying input files
2025-10-20 23:05:29 (16180): Guest Log: Copied input files into RunAtlas.
2025-10-20 23:05:30 (16180): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-20 23:05:30 (16180): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-20 23:05:30 (16180): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-20 23:05:30 (16180): Guest Log: Further information can be found at the LHC@home message board.
2025-10-20 23:05:44 (16180): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-20 23:05:45 (16180): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-20 23:05:45 (16180): Guest Log: 2.6.3.0 1620 0 32216 151947 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-20 23:05:51 (16180): Guest Log: copied the webapp to /var/www
2025-10-20 23:05:51 (16180): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-20 23:05:51 (16180): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-20 23:05:51 (16180): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-20 23:05:51 (16180): Guest Log:  *** Starting ATLAS job. (PandaID=6852960445 taskID=46771637) ***
2025-10-21 00:43:25 (16180): Status Report: Elapsed Time: '6000.000000'
2025-10-21 00:43:25 (16180): Status Report: CPU Time: '14286.921875'
2025-10-21 02:23:32 (16180): Status Report: Elapsed Time: '12000.000000'
2025-10-21 02:23:32 (16180): Status Report: CPU Time: '32139.265625'
2025-10-21 04:03:37 (16180): Status Report: Elapsed Time: '18000.000000'
2025-10-21 04:03:37 (16180): Status Report: CPU Time: '50009.187500'
2025-10-21 05:43:43 (16180): Status Report: Elapsed Time: '24000.000000'
2025-10-21 05:43:43 (16180): Status Report: CPU Time: '67878.562500'
2025-10-21 07:23:48 (16180): Status Report: Elapsed Time: '30000.000000'
2025-10-21 07:23:48 (16180): Status Report: CPU Time: '85724.062500'
2025-10-21 07:27:48 (16180): Guest Log:  *** Job finished ***
2025-10-21 07:27:48 (16180): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:03,886 | INFO     | [job] validate thread has finished
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:05,466 | INFO     | [data] queue_monitor thread has finished
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:40,424 | INFO     | [monitor] cgroup control has ended
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:41,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022351873856)>', '<ExcThread(monitor, started 140021680031488)>']
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:41,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:41,072 | INFO     | [monitor] control thread has ended
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:46,048 | INFO     | all workflow threads have been joined
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:46,048 | INFO     | end of generic workflow (traces error code: 0)
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:46,048 | INFO     | traces error code: 0
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:46,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:46,252 [wrapper] ==== pilot stdout END ====
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:46,258 [wrapper] ==== wrapper stdout RESUME ====
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:46,263 [wrapper] pilotpid: 6051
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:46,269 [wrapper] Pilot exit status: 0
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:47,292 [wrapper] pandaids: 6852960445
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:47,342 [wrapper] cleanup supervisor_pilot  8011 6052
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:47,347 [wrapper] Test setup, not cleaning
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:47,353 [wrapper] apfmon messages muted
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:47,358 [wrapper] ==== wrapper stdout END ====
2025-10-21 07:27:48 (16180): Guest Log: 2025-10-21 14:27:47,363 [wrapper] ==== wrapper stderr END ====
2025-10-21 07:27:48 (16180): Guest Log:  *** Error codes and diagnostics ***
2025-10-21 07:27:48 (16180): Guest Log:     "exeErrorCode": 0,
2025-10-21 07:27:48 (16180): Guest Log:     "exeErrorDiag": "",
2025-10-21 07:27:48 (16180): Guest Log:     "pilotErrorCode": 0,
2025-10-21 07:27:48 (16180): Guest Log:     "pilotErrorDiag": "",
2025-10-21 07:27:48 (16180): Guest Log:  *** Listing of results directory ***
2025-10-21 07:27:48 (16180): Guest Log: total 212468
2025-10-21 07:27:48 (16180): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 21 01:53 pilot3.tar.gz
2025-10-21 07:27:48 (16180): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 21 02:00 queuedata.json
2025-10-21 07:27:48 (16180): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 21 02:02 runpilot2-wrapper.sh
2025-10-21 07:27:48 (16180): Guest Log: -rwxr-xr-x. 1 atlas atlas      8701 Oct 21 06:05 init_data.xml
2025-10-21 07:27:48 (16180): Guest Log: -rwxr-xr-x. 1 atlas atlas    569675 Oct 21 06:05 input.tar.gz
2025-10-21 07:27:48 (16180): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 21 06:05 start_atlas.sh
2025-10-21 07:27:48 (16180): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 21 06:05 EVNT.46771634._002327.pool.root.1 -> /data/./ATLAS.root_0
2025-10-21 07:27:48 (16180): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Oct 21 06:05 pandaJob.out
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas    978830 Oct 21 06:11 agis_schedconf.cvmfs.json
2025-10-21 07:27:48 (16180): Guest Log: drwx------. 5 atlas atlas      4096 Oct 21 06:12 pilot3
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas 204633371 Oct 21 14:25 HITS.46771637._059252.pool.root.1
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas        95 Oct 21 14:26 pilot_heartbeat.json
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 21 14:26 memory_monitor_summary.json
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 21 14:26 agis_ddmendpoints.agis.ALL.json
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas    598688 Oct 21 14:26 log.46771637._059252.job.log.tgz.1
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas      7797 Oct 21 14:26 heartbeat.json
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 21 14:27 pilotlog.txt
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas   3949889 Oct 21 14:27 log.46771637._059252.job.log.1
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas       357 Oct 21 14:27 output.list
2025-10-21 07:27:48 (16180): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 21 14:27 runtime_log
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas   4567040 Oct 21 14:27 result.tar.gz
2025-10-21 07:27:48 (16180): Guest Log: -rw-r--r--. 1 atlas atlas      8618 Oct 21 14:27 runtime_log.err
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas       654 Oct 21 14:27 pqELDmTsGV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuv0NDmqGWw2m.diag
2025-10-21 07:27:48 (16180): Guest Log: Looking for outputfile HITS.46771637._059252.pool.root.1
2025-10-21 07:27:48 (16180): Guest Log: HITS file was successfully produced
2025-10-21 07:27:48 (16180): Guest Log: -rw-------. 1 atlas atlas 204633371 Oct 21 14:25 /home/atlas/RunAtlas/HITS.46771637._059252.pool.root.1
2025-10-21 07:27:50 (16180): Guest Log: Successfully finished the ATLAS job!
2025-10-21 07:27:50 (16180): Guest Log: Copying the results back to the shared directory!
2025-10-21 07:27:50 (16180): Guest Log:  *** Contents of shared directory: ***
2025-10-21 07:27:50 (16180): Guest Log: total 427280
2025-10-21 07:27:50 (16180): Guest Log: -rwxrwxrwx. 1 root root 227727661 Oct 21 06:02 ATLAS.root_0
2025-10-21 07:27:50 (16180): Guest Log: -rwxrwxrwx. 1 root root 204633371 Oct 21 14:27 HITS.pool.root.1
2025-10-21 07:27:50 (16180): Guest Log: -rwxrwxrwx. 1 root root      8701 Oct 21 06:02 init_data.xml
2025-10-21 07:27:50 (16180): Guest Log: -rwxrwxrwx. 1 root root    569675 Oct 21 06:01 input.tar.gz
2025-10-21 07:27:50 (16180): Guest Log: -rwxrwxrwx. 1 root root   4567040 Oct 21 14:27 result.tar.gz
2025-10-21 07:27:50 (16180): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 21 06:01 start_atlas.sh
2025-10-21 07:27:50 (16180): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-21 07:27:50 (16180): VM Completion File Detected.
2025-10-21 07:27:50 (16180): Powering off VM.
2025-10-21 07:27:51 (16180): Successfully stopped VM.
2025-10-21 07:27:51 (16180): Deregistering VM. (boinc_00bdf938cb8da723, slot#9)
2025-10-21 07:27:51 (16180): Removing network bandwidth throttle group from VM.
2025-10-21 07:27:51 (16180): Removing VM from VirtualBox.
2025-10-21 07:27:57 (16180): called boinc_finish(0)

</stderr_txt>
]]>

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