Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:27:44 (1379376): wrapper (7.7.26015): starting
12:27:44 (1379376): wrapper: running run_atlas (--nthreads 3)
[2025-10-21 12:27:44] Arguments: --nthreads 3
[2025-10-21 12:27:44] Threads: 3
[2025-10-21 12:27:44] Checking for CVMFS
[2025-10-21 12:27:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 12:27:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 12:27:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 12:27:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 12:27:45] 2.9.2.0 1176563 719 70556 151955 2 57 30904605 36864000 0 130560 0 531510 99.989 25332 1594 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 12:27:45] CVMFS is ok
[2025-10-21 12:27:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 12:27:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 12:27:45] Further information can be found at the LHC@home message board.
[2025-10-21 12:27:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 12:27:45] Checking for apptainer binary...
[2025-10-21 12:27:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 12:27:45] Running /usr/bin/apptainer --version
[2025-10-21 12:27:45] apptainer version 1.4.1-1.1
[2025-10-21 12:27:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 12:27:45] thA335a
[2025-10-21 12:27:45] apptainer works
[2025-10-21 12:27:45] Set ATHENA_PROC_NUMBER=3
[2025-10-21 12:27:45] Set ATHENA_CORE_NUMBER=3
[2025-10-21 12:27:45] Starting ATLAS job with PandaID=6852950310
[2025-10-21 12:27:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 13:55:03]  *** The last 200 lines of the pilot log: ***
[2025-10-21 13:55:03] 2025-10-21 11:53:58,990 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-21 13:55:03] 2025-10-21 11:53:59,003 | INFO     | sufficient remaining disk space (373622308864 B)
[2025-10-21 13:55:03] 2025-10-21 11:53:59,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 13:55:03] 2025-10-21 11:53:59,003 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 13:55:03] 2025-10-21 11:53:59,003 | INFO     | update_server=False
[2025-10-21 13:55:03] 2025-10-21 11:53:59,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 13:55:03] 2025-10-21 11:53:59,003 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-21 13:55:03] 2025-10-21 11:53:59,003 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 13:55:03] 2025-10-21 11:53:59,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 13:55:03] 2025-10-21 11:53:59,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 13:55:03] 2025-10-21 11:53:59,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 13:55:03] 2025-10-21 11:53:59,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 13:55:03] 2025-10-21 11:53:59,004 | INFO     | aborting loop
[2025-10-21 13:55:03] 2025-10-21 11:53:59,470 | INFO     | all job control threads have been joined
[2025-10-21 13:55:03] 2025-10-21 11:53:59,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 13:55:03] 2025-10-21 11:53:59,780 | INFO     | all data control threads have been joined
[2025-10-21 13:55:03] 2025-10-21 11:54:00,009 | INFO     | [job] retrieve thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:00,009 | INFO     | [job] job monitor thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:00,010 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:00,352 | INFO     | all payload control threads have been joined
[2025-10-21 13:55:03] 2025-10-21 11:54:00,380 | INFO     | [payload] failed_post thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:00,472 | INFO     | [job] control thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:00,784 | INFO     | [data] control thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:00,899 | INFO     | [payload] validate_post thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:01,010 | INFO     | [data] copytool_out thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:01,062 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:01,162 | INFO     | [data] copytool_in thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:01,358 | INFO     | [payload] control thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:01,446 | INFO     | [job] validate thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:01,487 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:01,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 13:55:03] 2025-10-21 11:54:02,896 | INFO     | [job] queue monitor thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:03,781 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:09,787 | INFO     | job.realtimelogging is not enabled
[2025-10-21 13:55:03] 2025-10-21 11:54:10,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 13:55:03] 2025-10-21 11:54:57,704 | INFO     | [monitor] cgroup control has ended
[2025-10-21 13:55:03] 2025-10-21 11:54:58,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505164752704)>', '<ExcThread(monitor, started 140504528307968)>']
[2025-10-21 13:55:03] 2025-10-21 11:54:59,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 13:55:03] 2025-10-21 11:54:59,321 | INFO     | [monitor] control thread has ended
[2025-10-21 13:55:03] 2025-10-21 11:55:03,736 | INFO     | all workflow threads have been joined
[2025-10-21 13:55:03] 2025-10-21 11:55:03,736 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 13:55:03] 2025-10-21 11:55:03,736 | INFO     | traces error code: 0
[2025-10-21 13:55:03] 2025-10-21 11:55:03,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 13:55:03] 2025-10-21 11:55:03,786 [wrapper] ==== pilot stdout END ====
[2025-10-21 13:55:03] 2025-10-21 11:55:03,788 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 13:55:03] 2025-10-21 11:55:03,791 [wrapper] pilotpid: 1383091
[2025-10-21 13:55:03] 2025-10-21 11:55:03,793 [wrapper] Pilot exit status: 0
[2025-10-21 13:55:03] 2025-10-21 11:55:03,801 [wrapper] pandaids: 6852950310
[2025-10-21 13:55:03] 2025-10-21 11:55:03,819 [wrapper] cleanup supervisor_pilot 1401429 1383092
[2025-10-21 13:55:03] 2025-10-21 11:55:03,821 [wrapper] Test setup, not cleaning
[2025-10-21 13:55:03] 2025-10-21 11:55:03,824 [wrapper] apfmon messages muted
[2025-10-21 13:55:03] 2025-10-21 11:55:03,826 [wrapper] ==== wrapper stdout END ====
[2025-10-21 13:55:03] 2025-10-21 11:55:03,829 [wrapper] ==== wrapper stderr END ====
[2025-10-21 13:55:03]  *** Error codes and diagnostics ***
[2025-10-21 13:55:03]     "exeErrorCode": 0,
[2025-10-21 13:55:03]     "exeErrorDiag": "",
[2025-10-21 13:55:03]     "pilotErrorCode": 0,
[2025-10-21 13:55:03]     "pilotErrorDiag": "",
[2025-10-21 13:55:03]  *** Listing of results directory ***
[2025-10-21 13:55:03] total 426368
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc    557409 Oct 21 00:52 pilot3.tar.gz
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc      5112 Oct 21 01:45 queuedata.json
[2025-10-21 13:55:03] -rwx------ 1 boinc boinc     36292 Oct 21 01:45 runpilot2-wrapper.sh
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc       100 Oct 21 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 13:55:03] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 12:27 run_atlas
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc       105 Oct 21 12:27 job.xml
[2025-10-21 13:55:03] -rw-r--r-- 2 boinc boinc 227371771 Oct 21 12:27 EVNT.46771634._002187.pool.root.1
[2025-10-21 13:55:03] -rw-r--r-- 2 boinc boinc    569673 Oct 21 12:27 input.tar.gz
[2025-10-21 13:55:03] -rw-r--r-- 2 boinc boinc     15120 Oct 21 12:27 start_atlas.sh
[2025-10-21 13:55:03] drwxrwx--x 2 boinc boinc      4096 Oct 21 12:27 shared
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc         0 Oct 21 12:27 boinc_setup_complete
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc      6447 Oct 21 12:27 init_data.xml
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc         0 Oct 21 12:27 boinc_lockfile
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc      2559 Oct 21 12:27 pandaJob.out
[2025-10-21 13:55:03] -rw------- 1 boinc boinc    978846 Oct 21 12:27 agis_schedconf.cvmfs.json
[2025-10-21 13:55:03] -rw------- 1 boinc boinc   1560740 Oct 21 12:27 agis_ddmendpoints.agis.ALL.json
[2025-10-21 13:55:03] drwx------ 5 boinc boinc      4096 Oct 21 12:27 pilot3
[2025-10-21 13:55:03] -rw------- 1 boinc boinc        95 Oct 21 13:53 pilot_heartbeat.json
[2025-10-21 13:55:03] -rw------- 1 boinc boinc 203345279 Oct 21 13:53 HITS.46771637._055785.pool.root.1
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc       529 Oct 21 13:53 boinc_task_state.xml
[2025-10-21 13:55:03] -rw------- 1 boinc boinc      1017 Oct 21 13:53 memory_monitor_summary.json
[2025-10-21 13:55:03] -rw------- 1 boinc boinc    243502 Oct 21 13:53 log.46771637._055785.job.log.tgz.1
[2025-10-21 13:55:03] -rw------- 1 boinc boinc      7753 Oct 21 13:53 heartbeat.json
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc      8192 Oct 21 13:54 boinc_mmap_file
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc        27 Oct 21 13:54 wrapper_checkpoint.txt
[2025-10-21 13:55:03] -rw------- 1 boinc boinc      4628 Oct 21 13:55 pilotlog.txt
[2025-10-21 13:55:03] -rw------- 1 boinc boinc    756147 Oct 21 13:55 log.46771637._055785.job.log.1
[2025-10-21 13:55:03] -rw------- 1 boinc boinc       357 Oct 21 13:55 output.list
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc       620 Oct 21 13:55 runtime_log
[2025-10-21 13:55:03] -rw------- 1 boinc boinc   1013760 Oct 21 13:55 result.tar.gz
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc      8782 Oct 21 13:55 runtime_log.err
[2025-10-21 13:55:03] -rw------- 1 boinc boinc       659 Oct 21 13:55 bsjKDmFkEV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4B0NDmlWwOkn.diag
[2025-10-21 13:55:03] -rw-r--r-- 1 boinc boinc      7877 Oct 21 13:55 stderr.txt
[2025-10-21 13:55:03] HITS file was successfully produced:
[2025-10-21 13:55:03] -rw------- 1 boinc boinc 203345279 Oct 21 13:53 shared/HITS.pool.root.1
[2025-10-21 13:55:03]  *** Contents of shared directory: ***
[2025-10-21 13:55:03] total 422200
[2025-10-21 13:55:03] -rw-r--r-- 2 boinc boinc 227371771 Oct 21 12:27 ATLAS.root_0
[2025-10-21 13:55:03] -rw-r--r-- 2 boinc boinc    569673 Oct 21 12:27 input.tar.gz
[2025-10-21 13:55:03] -rw-r--r-- 2 boinc boinc     15120 Oct 21 12:27 start_atlas.sh
[2025-10-21 13:55:03] -rw------- 1 boinc boinc 203345279 Oct 21 13:53 HITS.pool.root.1
[2025-10-21 13:55:03] -rw------- 1 boinc boinc   1013760 Oct 21 13:55 result.tar.gz
13:55:05 (1379376): run_atlas exited; CPU time 14719.604201
13:55:05 (1379376): called boinc_finish(0)

</stderr_txt>
]]>

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