Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:14:12 (21910): wrapper (7.7.26015): starting
00:14:12 (21910): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 00:14:12] Arguments: --nthreads 8
[2025-10-21 00:14:12] Threads: 8
[2025-10-21 00:14:12] Checking for CVMFS
[2025-10-21 00:14:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 00:14:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 00:14:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 00:14:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 00:14:13] 2.11.2.0 3026 26276 80216 151945 0 57 12419987 20275201 1 130560 0 14713679 99.981 1183902 37085 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-21 00:14:13] CVMFS is ok
[2025-10-21 00:14:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 00:14:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 00:14:13] Further information can be found at the LHC@home message board.
[2025-10-21 00:14:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 00:14:13] Checking for apptainer binary...
[2025-10-21 00:14:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 00:14:13] Running /usr/bin/apptainer --version
[2025-10-21 00:14:13] apptainer version 1.3.2-1.el7
[2025-10-21 00:14:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 00:14:15] c-204-25.aglt2.org
[2025-10-21 00:14:15] apptainer works
[2025-10-21 00:14:15] Set ATHENA_PROC_NUMBER=8
[2025-10-21 00:14:15] Set ATHENA_CORE_NUMBER=8
[2025-10-21 00:14:15] Starting ATLAS job with PandaID=6853196874
[2025-10-21 00:14:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 01:52:58]  *** The last 200 lines of the pilot log: ***
[2025-10-21 01:52:58]  replicas=None
[2025-10-21 01:52:58]  scope=mc23_13p6TeV
[2025-10-21 01:52:58]  status=None
[2025-10-21 01:52:58]  status_code=0
[2025-10-21 01:52:58]  storage_token=
[2025-10-21 01:52:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6853196874/log.46809188._003730.job.log.tgz.1
[2025-10-21 01:52:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/0a/log.46809188._003730.job.log.tgz.1
[2025-10-21 01:52:58]  workdir=None
[2025-10-21 01:52:58] ]
[2025-10-21 01:52:58] 2025-10-21 05:52:18,474 | INFO     | transferring file log.46809188._003730.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6853196874/log.46809188._003730.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-21 01:52:58] 2025-10-21 05:52:18,474 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6853196874/log.46809188._003730.job.log.tgz.1 /tmp/boinchome/slots/0/log.46809188._003730.job
[2025-10-21 01:52:58] 2025-10-21 05:52:18,500 | INFO     | adding to output.list: log.46809188._003730.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/0a/log.46809188._003730.job.log.tg
[2025-10-21 01:52:58] 2025-10-21 05:52:18,501 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-21 01:52:58] 2025-10-21 05:52:18,501 | INFO     | summary of transferred files:
[2025-10-21 01:52:58] 2025-10-21 05:52:18,501 | INFO     |  -- lfn=log.46809188._003730.job.log.tgz.1, status_code=0, status=transferred
[2025-10-21 01:52:58] 2025-10-21 05:52:18,501 | INFO     | stage-out finished correctly
[2025-10-21 01:52:58] 2025-10-21 05:52:18,641 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-21 01:52:58] 2025-10-21 05:52:18,771 | INFO     | time since job start (5866s) is within the limit (172800.0s)
[2025-10-21 01:52:58] 2025-10-21 05:52:19,724 | INFO     | job 6853196874 has state=finished
[2025-10-21 01:52:58] 2025-10-21 05:52:19,725 | INFO     | preparing for final server update for job 6853196874 in state='finished'
[2025-10-21 01:52:58] 2025-10-21 05:52:19,725 | INFO     | this job has now completed (state=finished)
[2025-10-21 01:52:58] 2025-10-21 05:52:19,726 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-21 01:52:58] 2025-10-21 05:52:19,726 | INFO     | log transfer has been attempted: DONE
[2025-10-21 01:52:58] 2025-10-21 05:52:19,726 | INFO     | job 6853196874 has finished - writing final server update
[2025-10-21 01:52:58] 2025-10-21 05:52:19,726 | INFO     | total number of processed events: 400 (read)
[2025-10-21 01:52:58] 2025-10-21 05:52:19,727 | INFO     | executing command: lscpu
[2025-10-21 01:52:58] 2025-10-21 05:52:19,754 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-21 01:52:58] 2025-10-21 05:52:20,727 | WARNING  | process 32060 can no longer be monitored (due to stat problems) - aborting
[2025-10-21 01:52:58] 2025-10-21 05:52:20,728 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6853196874/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 01:52:58] 2025-10-21 05:52:20,777 | INFO     | time since job start (5868s) is within the limit (172800.0s)
[2025-10-21 01:52:58] 2025-10-21 05:52:20,822 | INFO     | number of running child processes to parent process 32060: 1
[2025-10-21 01:52:58] 2025-10-21 05:52:20,822 | INFO     | maximum number of monitored processes: 6
[2025-10-21 01:52:58] 2025-10-21 05:52:22,783 | INFO     | time since job start (5870s) is within the limit (172800.0s)
[2025-10-21 01:52:58] 2025-10-21 05:52:23,325 | INFO     | monitor loop #433: job 0:6853196874 is in state 'finished'
[2025-10-21 01:52:58] 2025-10-21 05:52:23,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 01:52:58] 2025-10-21 05:52:23,902 | INFO     | PID=25632 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 01:52:58] 2025-10-21 05:52:24,902 | INFO     | time since job start (5872s) is within the limit (172800.0s)
[2025-10-21 01:52:58] 2025-10-21 05:52:25,354 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-21 01:52:58] 2025-10-21 05:52:25,358 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-10-21 01:52:58] 2025-10-21 05:52:25,360 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6853196874/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 01:52:58] 2025-10-21 05:52:25,360 | INFO     | extracted standard info from prmon json
[2025-10-21 01:52:58] 2025-10-21 05:52:25,361 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 01:52:58] 2025-10-21 05:52:25,361 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 01:52:58] 2025-10-21 05:52:25,361 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 01:52:58] 2025-10-21 05:52:25,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 01:52:58] 2025-10-21 05:52:25,364 | INFO     | fitting pss+swap vs Time
[2025-10-21 01:52:58] 2025-10-21 05:52:25,365 | INFO     | sum of square deviations: 218571540.0
[2025-10-21 01:52:58] 2025-10-21 05:52:25,365 | INFO     | sum of deviations: -14216543917.000002
[2025-10-21 01:52:58] 2025-10-21 05:52:25,365 | INFO     | mean x: 1761023094.0
[2025-10-21 01:52:58] 2025-10-21 05:52:25,366 | INFO     | mean y: 2656526.393258427
[2025-10-21 01:52:58] 2025-10-21 05:52:25,366 | INFO     | -- intersect: 114544843284.56966
[2025-10-21 01:52:58] 2025-10-21 05:52:25,366 | INFO     | intersect: 114544843284.56966
[2025-10-21 01:52:58] 2025-10-21 05:52:25,366 | INFO     | chi2: 0.1078977923925623
[2025-10-21 01:52:58] 2025-10-21 05:52:25,366 | INFO     | -- intersect: 114544843284.56966
[2025-10-21 01:52:58] 2025-10-21 05:52:25,367 | INFO     | current memory leak: -65.04 B/s (using 89 data points, chi2=0.11)
[2025-10-21 01:52:58] 2025-10-21 05:52:25,367 | INFO     | could have reported an average CPU frequency of 1945 MHz (7 samples)
[2025-10-21 01:52:58] 2025-10-21 05:52:25,367 | INFO     | ..............................
[2025-10-21 01:52:58] 2025-10-21 05:52:25,367 | INFO     | . Timing measurements:
[2025-10-21 01:52:58] 2025-10-21 05:52:25,368 | INFO     | . get job = 0 s
[2025-10-21 01:52:58] 2025-10-21 05:52:25,368 | INFO     | . initial setup = 2 s
[2025-10-21 01:52:58] 2025-10-21 05:52:25,368 | INFO     | . payload setup = 9 s
[2025-10-21 01:52:58] 2025-10-21 05:52:25,368 | INFO     | . stage-in = 0 s
[2025-10-21 01:52:58] 2025-10-21 05:52:25,368 | INFO     | . payload execution = 5835 s
[2025-10-21 01:52:58] 2025-10-21 05:52:25,368 | INFO     | . stage-out = 0 s
[2025-10-21 01:52:58] 2025-10-21 05:52:25,368 | INFO     | . log creation = 0 s
[2025-10-21 01:52:58] 2025-10-21 05:52:25,368 | INFO     | ..............................
[2025-10-21 01:52:58] 2025-10-21 05:52:25,458 | INFO     | 
[2025-10-21 01:52:58] 2025-10-21 05:52:25,458 | INFO     | job summary report
[2025-10-21 01:52:58] 2025-10-21 05:52:25,458 | INFO     | --------------------------------------------------
[2025-10-21 01:52:58] 2025-10-21 05:52:25,459 | INFO     | PanDA job id: 6853196874
[2025-10-21 01:52:58] 2025-10-21 05:52:25,459 | INFO     | task id: 46809188
[2025-10-21 01:52:58] 2025-10-21 05:52:25,459 | INFO     | errors: (none)
[2025-10-21 01:52:58] 2025-10-21 05:52:25,459 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 01:52:58] 2025-10-21 05:52:25,459 | INFO     | pilot state: finished 
[2025-10-21 01:52:58] 2025-10-21 05:52:25,459 | INFO     | transexitcode: 0
[2025-10-21 01:52:58] 2025-10-21 05:52:25,460 | INFO     | exeerrorcode: 0
[2025-10-21 01:52:58] 2025-10-21 05:52:25,460 | INFO     | exeerrordiag: 
[2025-10-21 01:52:58] 2025-10-21 05:52:25,460 | INFO     | exitcode: 0
[2025-10-21 01:52:58] 2025-10-21 05:52:25,460 | INFO     | exitmsg: OK
[2025-10-21 01:52:58] 2025-10-21 05:52:25,460 | INFO     | cpuconsumptiontime: 42958 s
[2025-10-21 01:52:58] 2025-10-21 05:52:25,461 | INFO     | nevents: 400
[2025-10-21 01:52:58] 2025-10-21 05:52:25,461 | INFO     | neventsw: 0
[2025-10-21 01:52:58] 2025-10-21 05:52:25,461 | INFO     | pid: 32060
[2025-10-21 01:52:58] 2025-10-21 05:52:25,461 | INFO     | pgrp: 32060
[2025-10-21 01:52:58] 2025-10-21 05:52:25,461 | INFO     | corecount: 8
[2025-10-21 01:52:58] 2025-10-21 05:52:25,461 | INFO     | event service: False
[2025-10-21 01:52:58] 2025-10-21 05:52:25,462 | INFO     | sizes: {0: 2348667, 1: 2348866, 7: 2349128, 11: 2349156, 5848: 2375844, 5849: 2385026, 5856: 2385164}
[2025-10-21 01:52:58] 2025-10-21 05:52:25,462 | INFO     | --------------------------------------------------
[2025-10-21 01:52:58] 2025-10-21 05:52:25,462 | INFO     | 
[2025-10-21 01:52:58] 2025-10-21 05:52:25,462 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 01:52:58] 2025-10-21 05:52:25,492 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,493 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,493 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,493 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,493 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,495 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,495 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,495 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 01:52:58] 2025-10-21 05:52:25,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,496 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 01:52:58] 2025-10-21 05:52:25,497 | INFO     | job 6853196874 has completed (purged errors)
[2025-10-21 01:52:58] 2025-10-21 05:52:25,497 | INFO     | overall cleanup function is called
[2025-10-21 01:52:58] 2025-10-21 05:52:26,505 | INFO     | --- collectZombieJob: --- 10, [32060]
[2025-10-21 01:52:58] 2025-10-21 05:52:26,505 | INFO     | zombie collector waiting for pid 32060
[2025-10-21 01:52:58] 2025-10-21 05:52:26,505 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 01:52:58] 2025-10-21 05:52:26,505 | INFO     | collected zombie processes
[2025-10-21 01:52:58] 2025-10-21 05:52:26,506 | INFO     | will attempt to kill all subprocesses of pid=32060
[2025-10-21 01:52:58] 2025-10-21 05:52:26,593 | INFO     | process IDs to be killed: [32060] (in reverse order)
[2025-10-21 01:52:58] 2025-10-21 05:52:26,653 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 01:52:58] 2025-10-21 05:52:26,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 01:52:58] 2025-10-21 05:52:26,657 | INFO     | did not find any defunct processes belonging to 32060
[2025-10-21 01:52:58] 2025-10-21 05:52:26,660 | INFO     | did not find any defunct processes belonging to 32060
[2025-10-21 01:52:58] 2025-10-21 05:52:26,661 | INFO     | ready for new job
[2025-10-21 01:52:58] 2025-10-21 05:52:26,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 01:52:58] 2025-10-21 05:52:26,662 | INFO     | ***************************************
[2025-10-21 01:52:58] 2025-10-21 05:52:26,663 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 01:52:58] 2025-10-21 05:52:26,663 | INFO     | ***************************************
[2025-10-21 01:52:58] 2025-10-21 05:52:26,663 | INFO     | 
[2025-10-21 01:52:58] 2025-10-21 05:52:26,663 | INFO     | architecture information:
[2025-10-21 01:52:58] 2025-10-21 05:52:26,664 | INFO     | executing command: cat /etc/os-release
[2025-10-21 01:52:58] 2025-10-21 05:52:26,683 | INFO     | cat /etc/os-release:
[2025-10-21 01:52:58] NAME="CentOS Linux"
[2025-10-21 01:52:58] VERSION="7 (Core)"
[2025-10-21 01:52:58] ID="centos"
[2025-10-21 01:52:58] ID_LIKE="rhel fedora"
[2025-10-21 01:52:58] VERSION_ID="7"
[2025-10-21 01:52:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 01:52:58] ANSI_COLOR="0;31"
[2025-10-21 01:52:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 01:52:58] HOME_URL="https://www.centos.org/"
[2025-10-21 01:52:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 01:52:58] 
[2025-10-21 01:52:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 01:52:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 01:52:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 01:52:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 01:52:58] 
[2025-10-21 01:52:58] 2025-10-21 05:52:26,684 | INFO     | ***************************************
[2025-10-21 01:52:58] 2025-10-21 05:52:27,187 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 01:52:58] 2025-10-21 05:52:27,207 | INFO     | sufficient remaining disk space (18660458496 B)
[2025-10-21 01:52:58] 2025-10-21 05:52:27,208 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 01:52:58] 2025-10-21 05:52:27,208 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 01:52:58] 2025-10-21 05:52:27,209 | INFO     | update_server=False
[2025-10-21 01:52:58] 2025-10-21 05:52:27,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 01:52:58] 2025-10-21 05:52:27,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 01:52:58] 2025-10-21 05:52:27,210 | INFO     | aborting loop
[2025-10-21 01:52:58] 2025-10-21 05:52:27,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 01:52:58] 2025-10-21 05:52:27,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 01:52:58] 2025-10-21 05:52:27,847 | INFO     | all payload control threads have been joined
[2025-10-21 01:52:58] 2025-10-21 05:52:27,865 | INFO     | all data control threads have been joined
[2025-10-21 01:52:58] 2025-10-21 05:52:28,215 | INFO     | [job] retrieve thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:28,215 | INFO     | [job] job monitor thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:28,216 | INFO     | [job] queue monitor thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:28,238 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:28,239 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:28,271 | INFO     | [payload] validate_post thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:28,423 | INFO     | all job control threads have been joined
[2025-10-21 01:52:58] 2025-10-21 05:52:28,716 | INFO     | [payload] failed_post thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:28,853 | INFO     | [payload] control thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:28,871 | INFO     | [data] control thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:29,107 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:29,216 | INFO     | [job] validate thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:29,216 | INFO     | [data] copytool_out thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:29,226 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:29,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 01:52:58] 2025-10-21 05:52:29,428 | INFO     | [job] control thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:29,509 | INFO     | [data] copytool_in thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:33,239 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 01:52:58] 2025-10-21 05:52:41,654 | INFO     | [monitor] cgroup control has ended
[2025-10-21 01:52:58] 2025-10-21 05:52:42,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549815117632)>', '<ExcThread(monitor, started 140549197633280)>']
[2025-10-21 01:52:58] 2025-10-21 05:52:47,648 | INFO     | all workflow threads have been joined
[2025-10-21 01:52:58] 2025-10-21 05:52:47,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 01:52:58] 2025-10-21 05:52:47,649 | INFO     | traces error code: 0
[2025-10-21 01:52:58] 2025-10-21 05:52:47,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 01:52:58] 2025-10-21 05:52:58,108 | INFO     | PID=25632 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 01:52:58] 2025-10-21 05:52:58,115 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 01:52:58] 2025-10-21 05:52:58,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 01:52:58] 2025-10-21 05:52:58,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 01:52:58] 2025-10-21 05:52:58,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 01:52:58] 2025-10-21 05:52:58,117 | INFO     | [monitor] control thread has ended
[2025-10-21 01:52:58] 2025-10-21 05:52:58,236 [wrapper] ==== pilot stdout END ====
[2025-10-21 01:52:58] 2025-10-21 05:52:58,241 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 01:52:58] 2025-10-21 05:52:58,245 [wrapper] pilotpid: 25632
[2025-10-21 01:52:58] 2025-10-21 05:52:58,250 [wrapper] Pilot exit status: 0
[2025-10-21 01:52:58] 2025-10-21 05:52:58,269 [wrapper] pandaids: 6853196874
[2025-10-21 01:52:58] 2025-10-21 05:52:58,311 [wrapper] cleanup supervisor_pilot 28142 25633
[2025-10-21 01:52:58] 2025-10-21 05:52:58,316 [wrapper] Test setup, not cleaning
[2025-10-21 01:52:58] 2025-10-21 05:52:58,321 [wrapper] apfmon messages muted
[2025-10-21 01:52:58] 2025-10-21 05:52:58,326 [wrapper] ==== wrapper stdout END ====
[2025-10-21 01:52:58] 2025-10-21 05:52:58,331 [wrapper] ==== wrapper stderr END ====
[2025-10-21 01:52:58]  *** Error codes and diagnostics ***
[2025-10-21 01:52:58]     "exeErrorCode": 0,
[2025-10-21 01:52:58]     "exeErrorDiag": "",
[2025-10-21 01:52:58]     "pilotErrorCode": 0,
[2025-10-21 01:52:58]     "pilotErrorDiag": "",
[2025-10-21 01:52:58]  *** Listing of results directory ***
[2025-10-21 01:52:58] total 336084
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas    557409 Oct 20 20:53 pilot3.tar.gz
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas      5112 Oct 20 21:07 queuedata.json
[2025-10-21 01:52:58] -rwx------ 1 boincer umatlas     36292 Oct 20 21:11 runpilot2-wrapper.sh
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas       100 Oct 21 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 01:52:58] -rwxr-xr-x 1 boincer umatlas      7986 Oct 21 00:14 run_atlas
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas       105 Oct 21 00:14 job.xml
[2025-10-21 01:52:58] -rw-r--r-- 2 boincer umatlas 190344839 Oct 21 00:14 EVNT.46809186._000144.pool.root.1
[2025-10-21 01:52:58] -rw-r--r-- 2 boincer umatlas    569672 Oct 21 00:14 input.tar.gz
[2025-10-21 01:52:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 00:14 start_atlas.sh
[2025-10-21 01:52:58] drwxrwx--x 2 boincer umatlas      4096 Oct 21 00:14 shared
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas         0 Oct 21 00:14 boinc_lockfile
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas      2492 Oct 21 00:14 pandaJob.out
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas    978830 Oct 21 00:14 agis_schedconf.cvmfs.json
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas   1560740 Oct 21 00:14 agis_ddmendpoints.agis.ALL.json
[2025-10-21 01:52:58] drwx------ 5 boincer umatlas      4096 Oct 21 00:14 pilot3
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas      5910 Oct 21 01:49 init_data.xml
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas 147579834 Oct 21 01:51 HITS.46809188._003730.pool.root.1
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas       529 Oct 21 01:51 boinc_task_state.xml
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas      1050 Oct 21 01:52 memory_monitor_summary.json
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas    331587 Oct 21 01:52 log.46809188._003730.job.log.tgz.1
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas      7845 Oct 21 01:52 heartbeat.json
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas      8192 Oct 21 01:52 boinc_mmap_file
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas        27 Oct 21 01:52 wrapper_checkpoint.txt
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas        95 Oct 21 01:52 pilot_heartbeat.json
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas       745 Oct 21 01:52 pilotlog.txt
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas    833780 Oct 21 01:52 log.46809188._003730.job.log.1
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas       357 Oct 21 01:52 output.list
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas       620 Oct 21 01:52 runtime_log
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas   1187840 Oct 21 01:52 result.tar.gz
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas       658 Oct 21 01:52 zzTMDm64FV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRTeMDmWBhRtn.diag
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas      8703 Oct 21 01:52 runtime_log.err
[2025-10-21 01:52:58] -rw-r--r-- 1 boincer umatlas     21929 Oct 21 01:52 stderr.txt
[2025-10-21 01:52:58] HITS file was successfully produced:
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas 147579834 Oct 21 01:51 shared/HITS.pool.root.1
[2025-10-21 01:52:58]  *** Contents of shared directory: ***
[2025-10-21 01:52:58] total 331744
[2025-10-21 01:52:58] -rw-r--r-- 2 boincer umatlas 190344839 Oct 21 00:14 ATLAS.root_0
[2025-10-21 01:52:58] -rw-r--r-- 2 boincer umatlas    569672 Oct 21 00:14 input.tar.gz
[2025-10-21 01:52:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 21 00:14 start_atlas.sh
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas 147579834 Oct 21 01:51 HITS.pool.root.1
[2025-10-21 01:52:58] -rw------- 1 boincer umatlas   1187840 Oct 21 01:52 result.tar.gz
01:52:59 (21910): run_atlas exited; CPU time 42906.359408
01:52:59 (21910): called boinc_finish(0)

</stderr_txt>
]]>

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