Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:08:37 (1640840): wrapper (7.7.26015): starting
15:08:37 (1640840): wrapper: running run_atlas (--nthreads 12)
[2025-10-21 15:08:37] Arguments: --nthreads 12
[2025-10-21 15:08:37] Threads: 12
[2025-10-21 15:08:37] Checking for CVMFS
[2025-10-21 15:08:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 15:08:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 15:08:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 15:08:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 15:08:39] 2.13.2.0 1918225 11298 185032 151958 1 338 32932920 46080000 51308 130560 0 73747006 99.956 9160094 24422 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-21 15:08:39] CVMFS is ok
[2025-10-21 15:08:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 15:08:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 15:08:39] Further information can be found at the LHC@home message board.
[2025-10-21 15:08:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 15:08:39] Checking for apptainer binary...
[2025-10-21 15:08:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 15:08:39] Running /usr/bin/apptainer --version
[2025-10-21 15:08:40] apptainer version 1.4.2-1.el9
[2025-10-21 15:08:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 15:08:41] mff2104.farm.particle.cz
[2025-10-21 15:08:41] apptainer works
[2025-10-21 15:08:41] Set ATHENA_PROC_NUMBER=12
[2025-10-21 15:08:41] Set ATHENA_CORE_NUMBER=12
[2025-10-21 15:08:41] Starting ATLAS job with PandaID=6853197487
[2025-10-21 15:08:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 16:51:55]  *** The last 200 lines of the pilot log: ***
[2025-10-21 16:51:55] 2025-10-21 14:49:07,399 | INFO     | monitor loop #405: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:07,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:09,199 | INFO     | time since job start (5929s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:09,904 | INFO     | monitor loop #406: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:09,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:11,208 | INFO     | time since job start (5931s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:12,409 | INFO     | monitor loop #407: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:12,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:13,214 | INFO     | time since job start (5933s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:14,914 | INFO     | monitor loop #408: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:14,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:15,221 | INFO     | time since job start (5935s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:17,228 | INFO     | time since job start (5937s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:17,419 | INFO     | monitor loop #409: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:17,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:19,023 | INFO     | PID=1646301 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 16:51:55] 2025-10-21 14:49:19,024 | INFO     | .. there are 83 such processes running
[2025-10-21 16:51:55] 2025-10-21 14:49:19,923 | INFO     | monitor loop #410: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:19,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:20,025 | INFO     | time since job start (5940s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:22,033 | INFO     | time since job start (5942s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:22,430 | INFO     | monitor loop #411: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:22,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:24,040 | INFO     | time since job start (5944s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:24,936 | INFO     | monitor loop #412: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:24,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:26,048 | INFO     | time since job start (5946s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:27,440 | INFO     | monitor loop #413: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:27,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:28,059 | INFO     | time since job start (5948s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:29,945 | INFO     | monitor loop #414: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:29,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:30,066 | INFO     | time since job start (5950s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:32,073 | INFO     | time since job start (5952s) is within the limit (172800.0s)
[2025-10-21 16:51:55] 2025-10-21 14:49:32,452 | INFO     | monitor loop #415: job 0:6853197487 is in state 'finished'
[2025-10-21 16:51:55] 2025-10-21 14:49:32,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 16:51:55] 2025-10-21 14:49:32,791 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-21 16:51:55] 2025-10-21 14:49:32,807 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2856.8935104166667
[2025-10-21 16:51:55] 2025-10-21 14:49:32,823 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6853197487/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 16:51:55] 2025-10-21 14:49:32,823 | INFO     | extracted standard info from prmon json
[2025-10-21 16:51:55] 2025-10-21 14:49:32,823 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 16:51:55] 2025-10-21 14:49:32,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 16:51:55] 2025-10-21 14:49:32,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 16:51:55] 2025-10-21 14:49:32,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 16:51:55] 2025-10-21 14:49:32,826 | INFO     | fitting pss+swap vs Time
[2025-10-21 16:51:55] 2025-10-21 14:49:32,826 | INFO     | sum of square deviations: 204159317.81609204
[2025-10-21 16:51:55] 2025-10-21 14:49:32,826 | INFO     | sum of deviations: 4077488015.390805
[2025-10-21 16:51:55] 2025-10-21 14:49:32,826 | INFO     | mean x: 1761055367.045977
[2025-10-21 16:51:55] 2025-10-21 14:49:32,826 | INFO     | mean y: 2751368.4022988505
[2025-10-21 16:51:55] 2025-10-21 14:49:32,826 | INFO     | -- intersect: -35169202723.0491
[2025-10-21 16:51:55] 2025-10-21 14:49:32,827 | INFO     | intersect: -35169202723.0491
[2025-10-21 16:51:55] 2025-10-21 14:49:32,827 | INFO     | chi2: 1.6532377197902066
[2025-10-21 16:51:55] 2025-10-21 14:49:32,827 | INFO     | -- intersect: -35169202723.0491
[2025-10-21 16:51:55] 2025-10-21 14:49:32,827 | INFO     | current memory leak: 19.97 B/s (using 87 data points, chi2=1.65)
[2025-10-21 16:51:55] 2025-10-21 14:49:32,827 | INFO     | could have reported an average CPU frequency of 2797 MHz (7 samples)
[2025-10-21 16:51:55] 2025-10-21 14:49:32,827 | INFO     | ..............................
[2025-10-21 16:51:55] 2025-10-21 14:49:32,827 | INFO     | . Timing measurements:
[2025-10-21 16:51:55] 2025-10-21 14:49:32,827 | INFO     | . get job = 0 s
[2025-10-21 16:51:55] 2025-10-21 14:49:32,828 | INFO     | . initial setup = 6 s
[2025-10-21 16:51:55] 2025-10-21 14:49:32,828 | INFO     | . payload setup = 72 s
[2025-10-21 16:51:55] 2025-10-21 14:49:32,828 | INFO     | . stage-in = 0 s
[2025-10-21 16:51:55] 2025-10-21 14:49:32,828 | INFO     | . payload execution = 5735 s
[2025-10-21 16:51:55] 2025-10-21 14:49:32,828 | INFO     | . stage-out = 1 s
[2025-10-21 16:51:55] 2025-10-21 14:49:32,828 | INFO     | . log creation = 0 s
[2025-10-21 16:51:55] 2025-10-21 14:49:32,828 | INFO     | ..............................
[2025-10-21 16:51:55] 2025-10-21 14:49:32,919 | INFO     | 
[2025-10-21 16:51:55] 2025-10-21 14:49:32,919 | INFO     | job summary report
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | --------------------------------------------------
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | PanDA job id: 6853197487
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | task id: 46809188
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | errors: (none)
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | pilot state: finished 
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | transexitcode: 0
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | exeerrorcode: 0
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | exeerrordiag: 
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | exitcode: 0
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | exitmsg: OK
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | cpuconsumptiontime: 29654 s
[2025-10-21 16:51:55] 2025-10-21 14:49:32,920 | INFO     | nevents: 400
[2025-10-21 16:51:55] 2025-10-21 14:49:32,921 | INFO     | neventsw: 0
[2025-10-21 16:51:55] 2025-10-21 14:49:32,921 | INFO     | pid: 1663809
[2025-10-21 16:51:55] 2025-10-21 14:49:32,921 | INFO     | pgrp: 1663809
[2025-10-21 16:51:55] 2025-10-21 14:49:32,921 | INFO     | corecount: 12
[2025-10-21 16:51:55] 2025-10-21 14:49:32,921 | INFO     | event service: False
[2025-10-21 16:51:55] 2025-10-21 14:49:32,921 | INFO     | sizes: {0: 2348612, 1: 2348696, 2: 2348895, 13: 2348895, 23: 2348951, 34: 2348979, 45: 2349135, 49: 2349425, 56: 2349453, 5811: 2376176, 5812: 2376175, 5814: 23855
[2025-10-21 16:51:55] 2025-10-21 14:49:32,921 | INFO     | --------------------------------------------------
[2025-10-21 16:51:55] 2025-10-21 14:49:32,921 | INFO     | 
[2025-10-21 16:51:55] 2025-10-21 14:49:32,921 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-10-21 16:51:55] 2025-10-21 14:49:33,032 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,033 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,033 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,033 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,034 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,034 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,034 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,034 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 16:51:55] 2025-10-21 14:49:33,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,035 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 16:51:55] 2025-10-21 14:49:33,035 | INFO     | job 6853197487 has completed (purged errors)
[2025-10-21 16:51:55] 2025-10-21 14:49:33,035 | INFO     | overall cleanup function is called
[2025-10-21 16:51:55] 2025-10-21 14:49:34,045 | INFO     | --- collectZombieJob: --- 10, [1663809]
[2025-10-21 16:51:55] 2025-10-21 14:49:34,045 | INFO     | zombie collector waiting for pid 1663809
[2025-10-21 16:51:55] 2025-10-21 14:49:34,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 16:51:55] 2025-10-21 14:49:34,046 | INFO     | collected zombie processes
[2025-10-21 16:51:55] 2025-10-21 14:49:34,046 | INFO     | will attempt to kill all subprocesses of pid=1663809
[2025-10-21 16:51:55] 2025-10-21 14:49:34,713 | INFO     | process IDs to be killed: [1663809] (in reverse order)
[2025-10-21 16:51:55] 2025-10-21 14:49:35,010 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 16:51:55] 2025-10-21 14:49:35,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 16:51:55] 2025-10-21 14:49:35,039 | INFO     | did not find any defunct processes belonging to 1663809
[2025-10-21 16:51:55] 2025-10-21 14:49:35,066 | INFO     | did not find any defunct processes belonging to 1663809
[2025-10-21 16:51:55] 2025-10-21 14:49:35,066 | INFO     | ready for new job
[2025-10-21 16:51:55] 2025-10-21 14:49:35,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 16:51:55] 2025-10-21 14:49:35,068 | INFO     | ***************************************
[2025-10-21 16:51:55] 2025-10-21 14:49:35,068 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 16:51:55] 2025-10-21 14:49:35,068 | INFO     | ***************************************
[2025-10-21 16:51:55] 2025-10-21 14:49:35,068 | INFO     | 
[2025-10-21 16:51:55] 2025-10-21 14:49:35,074 | INFO     | architecture information:
[2025-10-21 16:51:55] 2025-10-21 14:49:35,074 | INFO     | executing command: cat /etc/os-release
[2025-10-21 16:51:55] 2025-10-21 14:49:35,191 | INFO     | cat /etc/os-release:
[2025-10-21 16:51:55] NAME="CentOS Linux"
[2025-10-21 16:51:55] VERSION="7 (Core)"
[2025-10-21 16:51:55] ID="centos"
[2025-10-21 16:51:55] ID_LIKE="rhel fedora"
[2025-10-21 16:51:55] VERSION_ID="7"
[2025-10-21 16:51:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 16:51:55] ANSI_COLOR="0;31"
[2025-10-21 16:51:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 16:51:55] HOME_URL="https://www.centos.org/"
[2025-10-21 16:51:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 16:51:55] 
[2025-10-21 16:51:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 16:51:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 16:51:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 16:51:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 16:51:55] 
[2025-10-21 16:51:55] 2025-10-21 14:49:35,191 | INFO     | ***************************************
[2025-10-21 16:51:55] 2025-10-21 14:49:35,694 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-10-21 16:51:55] 2025-10-21 14:49:35,767 | INFO     | sufficient remaining disk space (1669237571584 B)
[2025-10-21 16:51:55] 2025-10-21 14:49:35,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 16:51:55] 2025-10-21 14:49:35,768 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 16:51:55] 2025-10-21 14:49:35,768 | INFO     | update_server=False
[2025-10-21 16:51:55] 2025-10-21 14:49:35,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 16:51:55] 2025-10-21 14:49:35,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 16:51:55] 2025-10-21 14:49:35,966 | INFO     | aborting loop
[2025-10-21 16:51:55] 2025-10-21 14:49:36,172 | INFO     | all payload control threads have been joined
[2025-10-21 16:51:55] 2025-10-21 14:49:36,660 | INFO     | all job control threads have been joined
[2025-10-21 16:51:55] 2025-10-21 14:49:36,751 | INFO     | all data control threads have been joined
[2025-10-21 16:51:55] 2025-10-21 14:49:36,776 | INFO     | [job] retrieve thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:36,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 16:51:55] 2025-10-21 14:49:36,932 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:36,971 | INFO     | [job] job monitor thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:37,177 | INFO     | [payload] control thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:37,373 | INFO     | [payload] failed_post thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:37,550 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:37,666 | INFO     | [job] control thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:37,757 | INFO     | [data] control thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:37,771 | INFO     | [job] validate thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:37,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 16:51:55] 2025-10-21 14:49:38,074 | INFO     | [payload] validate_post thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:38,122 | INFO     | [data] copytool_in thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:38,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:38,232 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:38,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 16:51:55] 2025-10-21 14:49:38,825 | INFO     | [data] copytool_out thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:38,935 | INFO     | [job] queue monitor thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:49:42,536 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 16:51:55] 2025-10-21 14:50:06,025 | INFO     | PID=1646301 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 16:51:55] 2025-10-21 14:50:06,025 | INFO     | .. there are 83 such processes running
[2025-10-21 16:51:55] 2025-10-21 14:50:06,025 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 16:51:55] 2025-10-21 14:50:06,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 16:51:55] 2025-10-21 14:50:06,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 16:51:55] 2025-10-21 14:50:30,027 | INFO     | [monitor] cgroup control has ended
[2025-10-21 16:51:55] 2025-10-21 14:50:32,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379193001792)>', '<ExcThread(monitor, started 140378699187968)>']
[2025-10-21 16:51:55] 2025-10-21 14:50:32,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 16:51:55] 2025-10-21 14:50:32,177 | INFO     | [monitor] control thread has ended
[2025-10-21 16:51:55] 2025-10-21 14:50:37,076 | INFO     | all workflow threads have been joined
[2025-10-21 16:51:55] 2025-10-21 14:50:37,077 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 16:51:55] 2025-10-21 14:50:37,077 | INFO     | traces error code: 0
[2025-10-21 16:51:55] 2025-10-21 14:50:37,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 16:51:55] 2025-10-21 14:50:37,347 [wrapper] ==== pilot stdout END ====
[2025-10-21 16:51:55] 2025-10-21 14:50:37,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 16:51:55] 2025-10-21 14:50:37,355 [wrapper] pilotpid: 1646301
[2025-10-21 16:51:55] 2025-10-21 14:50:37,359 [wrapper] Pilot exit status: 0
[2025-10-21 16:51:55] 2025-10-21 14:50:37,443 [wrapper] pandaids: 6853197487
[2025-10-21 16:51:55] 2025-10-21 14:50:37,588 [wrapper] cleanup supervisor_pilot 1999519 1646302
[2025-10-21 16:51:55] 2025-10-21 14:50:37,591 [wrapper] Test setup, not cleaning
[2025-10-21 16:51:55] 2025-10-21 14:50:37,594 [wrapper] apfmon messages muted
[2025-10-21 16:51:55] 2025-10-21 14:50:37,597 [wrapper] ==== wrapper stdout END ====
[2025-10-21 16:51:55] 2025-10-21 14:50:37,600 [wrapper] ==== wrapper stderr END ====
[2025-10-21 16:51:55]  *** Error codes and diagnostics ***
[2025-10-21 16:51:55]     "exeErrorCode": 0,
[2025-10-21 16:51:55]     "exeErrorDiag": "",
[2025-10-21 16:51:55]     "pilotErrorCode": 0,
[2025-10-21 16:51:55]     "pilotErrorDiag": "",
[2025-10-21 16:51:55]  *** Listing of results directory ***
[2025-10-21 16:51:55] total 331920
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc    557409 Oct 21 02:53 pilot3.tar.gz
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc      5112 Oct 21 03:18 queuedata.json
[2025-10-21 16:51:55] -rwx------ 1 boinc boinc     36292 Oct 21 03:20 runpilot2-wrapper.sh
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc       100 Oct 21 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 16:51:55] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 15:08 run_atlas
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc       105 Oct 21 15:08 job.xml
[2025-10-21 16:51:55] -rw-r--r-- 2 boinc boinc 188297525 Oct 21 15:08 EVNT.46809186._000159.pool.root.1
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc      6665 Oct 21 15:08 init_data.xml
[2025-10-21 16:51:55] -rw-r--r-- 2 boinc boinc     15120 Oct 21 15:08 start_atlas.sh
[2025-10-21 16:51:55] drwxrwx--x 2 boinc boinc      4096 Oct 21 15:08 shared
[2025-10-21 16:51:55] -rw-r--r-- 2 boinc boinc    569670 Oct 21 15:08 input.tar.gz
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc         0 Oct 21 15:08 boinc_lockfile
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc      2492 Oct 21 15:08 pandaJob.out
[2025-10-21 16:51:55] -rw------- 1 boinc boinc    978830 Oct 21 15:10 agis_schedconf.cvmfs.json
[2025-10-21 16:51:55] -rw------- 1 boinc boinc   1560740 Oct 21 15:10 agis_ddmendpoints.agis.ALL.json
[2025-10-21 16:51:55] drwx------ 5 boinc boinc      4096 Oct 21 15:10 pilot3
[2025-10-21 16:51:55] -rw------- 1 boinc boinc 145279629 Oct 21 16:48 HITS.46809188._003995.pool.root.1
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc       529 Oct 21 16:48 boinc_task_state.xml
[2025-10-21 16:51:55] -rw------- 1 boinc boinc      1033 Oct 21 16:48 memory_monitor_summary.json
[2025-10-21 16:51:55] -rw------- 1 boinc boinc    407613 Oct 21 16:48 log.46809188._003995.job.log.tgz.1
[2025-10-21 16:51:55] -rw------- 1 boinc boinc        95 Oct 21 16:49 pilot_heartbeat.json
[2025-10-21 16:51:55] -rw------- 1 boinc boinc      7803 Oct 21 16:49 heartbeat.json
[2025-10-21 16:51:55] -rw------- 1 boinc boinc      4827 Oct 21 16:50 pilotlog.txt
[2025-10-21 16:51:55] -rw------- 1 boinc boinc    793971 Oct 21 16:50 log.46809188._003995.job.log.1
[2025-10-21 16:51:55] -rw------- 1 boinc boinc       357 Oct 21 16:50 output.list
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc       620 Oct 21 16:50 runtime_log
[2025-10-21 16:51:55] -rw------- 1 boinc boinc   1218560 Oct 21 16:50 result.tar.gz
[2025-10-21 16:51:55] -rw------- 1 boinc boinc       667 Oct 21 16:50 wmxKDmQEGV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCj0NDmJhqvXo.diag
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc      8764 Oct 21 16:50 runtime_log.err
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc      8192 Oct 21 16:51 boinc_mmap_file
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc        26 Oct 21 16:51 wrapper_checkpoint.txt
[2025-10-21 16:51:55] -rw-r--r-- 1 boinc boinc     22401 Oct 21 16:51 stderr.txt
[2025-10-21 16:51:55] HITS file was successfully produced:
[2025-10-21 16:51:55] -rw------- 1 boinc boinc 145279629 Oct 21 16:48 shared/HITS.pool.root.1
[2025-10-21 16:51:55]  *** Contents of shared directory: ***
[2025-10-21 16:51:55] total 327540
[2025-10-21 16:51:55] -rw-r--r-- 2 boinc boinc 188297525 Oct 21 15:08 ATLAS.root_0
[2025-10-21 16:51:55] -rw-r--r-- 2 boinc boinc     15120 Oct 21 15:08 start_atlas.sh
[2025-10-21 16:51:55] -rw-r--r-- 2 boinc boinc    569670 Oct 21 15:08 input.tar.gz
[2025-10-21 16:51:55] -rw------- 1 boinc boinc 145279629 Oct 21 16:48 HITS.pool.root.1
[2025-10-21 16:51:55] -rw------- 1 boinc boinc   1218560 Oct 21 16:50 result.tar.gz
16:51:57 (1640840): run_atlas exited; CPU time 29967.088413
16:51:57 (1640840): called boinc_finish(0)

</stderr_txt>
]]>

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