Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:48 (461275): wrapper (7.7.26015): starting
00:04:48 (461275): wrapper: running run_atlas (--nthreads 9)
[2025-10-21 00:04:48] Arguments: --nthreads 9
[2025-10-21 00:04:48] Threads: 9
[2025-10-21 00:04:48] Checking for CVMFS
[2025-10-21 00:04:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 00:04:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 00:04:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 00:04:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 00:04:52] 2.13.2.0 3821245 141719 329108 151945 1 491 13679659 21042177 18518 16776704 0 128011851 99.444 185530989 30272 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-21 00:04:52] CVMFS is ok
[2025-10-21 00:04:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 00:04:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 00:04:52] Further information can be found at the LHC@home message board.
[2025-10-21 00:04:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 00:04:52] Checking for apptainer binary...
[2025-10-21 00:04:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 00:04:52] Running /usr/bin/apptainer --version
[2025-10-21 00:04:52] apptainer version 1.4.2-1.el9
[2025-10-21 00:04:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 00:04:53] c-6-1.aglt2.org
[2025-10-21 00:04:53] apptainer works
[2025-10-21 00:04:53] Set ATHENA_PROC_NUMBER=9
[2025-10-21 00:04:53] Set ATHENA_CORE_NUMBER=9
[2025-10-21 00:04:53] Starting ATLAS job with PandaID=6852961522
[2025-10-21 00:04:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 13:15:25]  *** The last 200 lines of the pilot log: ***
[2025-10-21 13:15:25] 2025-10-21 17:14:33,131 | INFO     | fitting pss+swap vs Time
[2025-10-21 13:15:25] 2025-10-21 17:14:33,133 | INFO     | sum of square deviations: 142119703677.69894
[2025-10-21 13:15:25] 2025-10-21 17:14:33,150 | INFO     | sum of deviations: 716201442314.4353
[2025-10-21 13:15:25] 2025-10-21 17:14:33,151 | INFO     | mean x: 1761043333.1037614
[2025-10-21 13:15:25] 2025-10-21 17:14:33,151 | INFO     | mean y: 2367591.194552529
[2025-10-21 13:15:25] 2025-10-21 17:14:33,151 | INFO     | -- intersect: -8872276406.14618
[2025-10-21 13:15:25] 2025-10-21 17:14:33,151 | INFO     | intersect: -8872276406.14618
[2025-10-21 13:15:25] 2025-10-21 17:14:33,153 | INFO     | chi2: 7.35294604867431
[2025-10-21 13:15:25] 2025-10-21 17:14:33,154 | INFO     | sum of square deviations: 139372962884.06793
[2025-10-21 13:15:25] 2025-10-21 17:14:33,172 | INFO     | sum of deviations: 763663030632.3113
[2025-10-21 13:15:25] 2025-10-21 17:14:33,172 | INFO     | mean x: 1761043180.610966
[2025-10-21 13:15:25] 2025-10-21 17:14:33,173 | INFO     | mean y: 2370210.2963446476
[2025-10-21 13:15:25] 2025-10-21 17:14:33,173 | INFO     | -- intersect: -9646872688.40268
[2025-10-21 13:15:25] 2025-10-21 17:14:33,173 | INFO     | intersect: -9646872688.40268
[2025-10-21 13:15:25] 2025-10-21 17:14:33,174 | INFO     | chi2: 6.521316428092533
[2025-10-21 13:15:25] 2025-10-21 17:14:33,174 | INFO     | current chi2=6.521316428092533 (change=11.31015534558036 %)
[2025-10-21 13:15:25] 2025-10-21 17:14:33,174 | INFO     | right removable region: 765
[2025-10-21 13:15:25] 2025-10-21 17:14:33,176 | INFO     | sum of square deviations: 139372443774.06793
[2025-10-21 13:15:25] 2025-10-21 17:14:33,193 | INFO     | sum of deviations: 479997166123.3752
[2025-10-21 13:15:25] 2025-10-21 17:14:33,193 | INFO     | mean x: 1761043485.610966
[2025-10-21 13:15:25] 2025-10-21 17:14:33,193 | INFO     | mean y: 2380698.3838120103
[2025-10-21 13:15:25] 2025-10-21 17:14:33,193 | INFO     | -- intersect: -6062633730.749509
[2025-10-21 13:15:25] 2025-10-21 17:14:33,194 | INFO     | intersect: -6062633730.749509
[2025-10-21 13:15:25] 2025-10-21 17:14:33,195 | INFO     | chi2: 3.6041063531638926
[2025-10-21 13:15:25] 2025-10-21 17:14:33,195 | INFO     | current chi2=3.6041063531638926 (change=50.98418607581529 %)
[2025-10-21 13:15:25] 2025-10-21 17:14:33,196 | INFO     | sum of square deviations: 136660812445.35622
[2025-10-21 13:15:25] 2025-10-21 17:14:33,216 | INFO     | sum of deviations: 316507100506.9934
[2025-10-21 13:15:25] 2025-10-21 17:14:33,216 | INFO     | mean x: 1761043638.1182654
[2025-10-21 13:15:25] 2025-10-21 17:14:33,217 | INFO     | mean y: 2389888.388961892
[2025-10-21 13:15:25] 2025-10-21 17:14:33,217 | INFO     | -- intersect: -4076195668.022599
[2025-10-21 13:15:25] 2025-10-21 17:14:33,217 | INFO     | intersect: -4076195668.022599
[2025-10-21 13:15:25] 2025-10-21 17:14:33,218 | INFO     | chi2: 1.861204869102938
[2025-10-21 13:15:25] 2025-10-21 17:14:33,218 | INFO     | current chi2=1.861204869102938 (change=48.358769505537346 %)
[2025-10-21 13:15:25] 2025-10-21 17:14:33,219 | INFO     | sum of square deviations: 133984670095.5595
[2025-10-21 13:15:25] 2025-10-21 17:14:33,234 | INFO     | sum of deviations: 228776077364.11502
[2025-10-21 13:15:25] 2025-10-21 17:14:33,235 | INFO     | mean x: 1761043790.6230159
[2025-10-21 13:15:25] 2025-10-21 17:14:33,235 | INFO     | mean y: 2394887.3267195765
[2025-10-21 13:15:25] 2025-10-21 17:14:33,235 | INFO     | -- intersect: -3004551281.9464006
[2025-10-21 13:15:25] 2025-10-21 17:14:33,235 | INFO     | intersect: -3004551281.9464006
[2025-10-21 13:15:25] 2025-10-21 17:14:33,236 | INFO     | chi2: 1.3961586204148135
[2025-10-21 13:15:25] 2025-10-21 17:14:33,236 | INFO     | current chi2=1.3961586204148135 (change=24.986300885418757 %)
[2025-10-21 13:15:25] 2025-10-21 17:14:33,236 | INFO     | left removable region: 30
[2025-10-21 13:15:25] 2025-10-21 17:14:33,238 | INFO     | sum of square deviations: 123126882116.56609
[2025-10-21 13:15:25] 2025-10-21 17:14:33,253 | INFO     | sum of deviations: 131139255894.33308
[2025-10-21 13:15:25] 2025-10-21 17:14:33,253 | INFO     | mean x: 1761044065.140136
[2025-10-21 13:15:25] 2025-10-21 17:14:33,254 | INFO     | mean y: 2406326.6666666665
[2025-10-21 13:15:25] 2025-10-21 17:14:33,254 | INFO     | -- intersect: -1873236135.2367587
[2025-10-21 13:15:25] 2025-10-21 17:14:33,254 | INFO     | intersect: -1873236135.2367587
[2025-10-21 13:15:25] 2025-10-21 17:14:33,255 | INFO     | chi2: 0.08784855278125
[2025-10-21 13:15:25] 2025-10-21 17:14:33,256 | INFO     | -- intersect: -1873236135.2367587
[2025-10-21 13:15:25] 2025-10-21 17:14:33,256 | INFO     | current memory leak: 1.07 B/s (using 735 data points, chi2=0.09)
[2025-10-21 13:15:25] 2025-10-21 17:14:33,257 | INFO     | could have reported an average CPU frequency of 2600 MHz (29 samples)
[2025-10-21 13:15:25] 2025-10-21 17:14:33,257 | INFO     | ..............................
[2025-10-21 13:15:25] 2025-10-21 17:14:33,257 | INFO     | . Timing measurements:
[2025-10-21 13:15:25] 2025-10-21 17:14:33,257 | INFO     | . get job = 0 s
[2025-10-21 13:15:25] 2025-10-21 17:14:33,257 | INFO     | . initial setup = 11 s
[2025-10-21 13:15:25] 2025-10-21 17:14:33,257 | INFO     | . payload setup = 67 s
[2025-10-21 13:15:25] 2025-10-21 17:14:33,257 | INFO     | . stage-in = 0 s
[2025-10-21 13:15:25] 2025-10-21 17:14:33,258 | INFO     | . payload execution = 47065 s
[2025-10-21 13:15:25] 2025-10-21 17:14:33,258 | INFO     | . stage-out = 3 s
[2025-10-21 13:15:25] 2025-10-21 17:14:33,258 | INFO     | . log creation = 0 s
[2025-10-21 13:15:25] 2025-10-21 17:14:33,258 | INFO     | ..............................
[2025-10-21 13:15:25] 2025-10-21 17:14:33,674 | INFO     | 
[2025-10-21 13:15:25] 2025-10-21 17:14:33,674 | INFO     | job summary report
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | --------------------------------------------------
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | PanDA job id: 6852961522
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | task id: 46771637
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | errors: (none)
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | pilot state: finished 
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | transexitcode: 0
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | exeerrorcode: 0
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | exeerrordiag: 
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | exitcode: 0
[2025-10-21 13:15:25] 2025-10-21 17:14:33,675 | INFO     | exitmsg: OK
[2025-10-21 13:15:25] 2025-10-21 17:14:33,676 | INFO     | cpuconsumptiontime: 61422 s
[2025-10-21 13:15:25] 2025-10-21 17:14:33,676 | INFO     | nevents: 400
[2025-10-21 13:15:25] 2025-10-21 17:14:33,676 | INFO     | neventsw: 0
[2025-10-21 13:15:25] 2025-10-21 17:14:33,676 | INFO     | pid: 503470
[2025-10-21 13:15:25] 2025-10-21 17:14:33,676 | INFO     | pgrp: 503470
[2025-10-21 13:15:25] 2025-10-21 17:14:33,676 | INFO     | corecount: 9
[2025-10-21 13:15:25] 2025-10-21 17:14:33,676 | INFO     | event service: False
[2025-10-21 13:15:25] 2025-10-21 17:14:33,676 | INFO     | sizes: {0: 2348103, 2: 2348788, 3: 2348816, 4: 2348987, 5: 2349015, 17: 2349071, 29: 2349227, 40: 2349255, 52: 2349283, 57: 2349573, 64: 2349601, 47136: 2394893, 4
[2025-10-21 13:15:25] 2025-10-21 17:14:33,676 | INFO     | --------------------------------------------------
[2025-10-21 13:15:25] 2025-10-21 17:14:33,676 | INFO     | 
[2025-10-21 13:15:25] 2025-10-21 17:14:33,677 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-21 13:15:25] 2025-10-21 17:14:33,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,700 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,701 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 13:15:25] 2025-10-21 17:14:33,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,701 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 13:15:25] 2025-10-21 17:14:33,701 | INFO     | job 6852961522 has completed (purged errors)
[2025-10-21 13:15:25] 2025-10-21 17:14:33,702 | INFO     | overall cleanup function is called
[2025-10-21 13:15:25] 2025-10-21 17:14:34,714 | INFO     | --- collectZombieJob: --- 10, [503470]
[2025-10-21 13:15:25] 2025-10-21 17:14:34,714 | INFO     | zombie collector waiting for pid 503470
[2025-10-21 13:15:25] 2025-10-21 17:14:34,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 13:15:25] 2025-10-21 17:14:34,714 | INFO     | collected zombie processes
[2025-10-21 13:15:25] 2025-10-21 17:14:34,714 | INFO     | will attempt to kill all subprocesses of pid=503470
[2025-10-21 13:15:25] 2025-10-21 17:14:35,065 | INFO     | process IDs to be killed: [503470] (in reverse order)
[2025-10-21 13:15:25] 2025-10-21 17:14:35,187 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 13:15:25] 2025-10-21 17:14:35,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 13:15:25] 2025-10-21 17:14:35,274 | INFO     | did not find any defunct processes belonging to 503470
[2025-10-21 13:15:25] 2025-10-21 17:14:35,340 | INFO     | did not find any defunct processes belonging to 503470
[2025-10-21 13:15:25] 2025-10-21 17:14:35,340 | INFO     | ready for new job
[2025-10-21 13:15:25] 2025-10-21 17:14:35,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 13:15:25] 2025-10-21 17:14:35,368 | INFO     | ***************************************
[2025-10-21 13:15:25] 2025-10-21 17:14:35,369 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 13:15:25] 2025-10-21 17:14:35,369 | INFO     | ***************************************
[2025-10-21 13:15:25] 2025-10-21 17:14:35,369 | INFO     | 
[2025-10-21 13:15:25] 2025-10-21 17:14:35,384 | INFO     | architecture information:
[2025-10-21 13:15:25] 2025-10-21 17:14:35,398 | INFO     | executing command: cat /etc/os-release
[2025-10-21 13:15:25] 2025-10-21 17:14:35,559 | INFO     | cat /etc/os-release:
[2025-10-21 13:15:25] NAME="CentOS Linux"
[2025-10-21 13:15:25] VERSION="7 (Core)"
[2025-10-21 13:15:25] ID="centos"
[2025-10-21 13:15:25] ID_LIKE="rhel fedora"
[2025-10-21 13:15:25] VERSION_ID="7"
[2025-10-21 13:15:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 13:15:25] ANSI_COLOR="0;31"
[2025-10-21 13:15:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 13:15:25] HOME_URL="https://www.centos.org/"
[2025-10-21 13:15:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 13:15:25] 
[2025-10-21 13:15:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 13:15:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 13:15:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 13:15:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 13:15:25] 
[2025-10-21 13:15:25] 2025-10-21 17:14:35,559 | INFO     | ***************************************
[2025-10-21 13:15:25] 2025-10-21 17:14:36,062 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-21 13:15:25] 2025-10-21 17:14:36,083 | INFO     | sufficient remaining disk space (53054799872 B)
[2025-10-21 13:15:25] 2025-10-21 17:14:36,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 13:15:25] 2025-10-21 17:14:36,084 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 13:15:25] 2025-10-21 17:14:36,084 | INFO     | update_server=False
[2025-10-21 13:15:25] 2025-10-21 17:14:36,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 13:15:25] 2025-10-21 17:14:36,369 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-21 13:15:25] 2025-10-21 17:14:36,371 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-21 13:15:25] 2025-10-21 17:14:36,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 13:15:25] 2025-10-21 17:14:36,371 | INFO     | will abort loop
[2025-10-21 13:15:25] 2025-10-21 17:14:36,478 | INFO     | all payload control threads have been joined
[2025-10-21 13:15:25] 2025-10-21 17:14:36,707 | INFO     | all data control threads have been joined
[2025-10-21 13:15:25] 2025-10-21 17:14:36,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 13:15:25] 2025-10-21 17:14:37,091 | INFO     | [job] retrieve thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:37,177 | INFO     | [job] validate thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:37,185 | INFO     | [data] copytool_in thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:37,202 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:37,377 | INFO     | [job] job monitor thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:37,402 | INFO     | [payload] failed_post thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:37,484 | INFO     | [payload] control thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:37,713 | INFO     | [data] control thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:37,744 | INFO     | all job control threads have been joined
[2025-10-21 13:15:25] 2025-10-21 17:14:37,873 | INFO     | [payload] validate_post thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:37,992 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:38,005 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:38,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 13:15:25] 2025-10-21 17:14:38,720 | INFO     | [data] copytool_out thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:38,749 | INFO     | [job] control thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:39,408 | INFO     | [job] queue monitor thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:39,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 13:15:25] 2025-10-21 17:14:43,543 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:14:46,659 | INFO     | job.realtimelogging is not enabled
[2025-10-21 13:15:25] 2025-10-21 17:14:47,665 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 13:15:25] 2025-10-21 17:15:05,983 | INFO     | PID=476537 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 13:15:25] 2025-10-21 17:15:05,984 | INFO     | .. there are 28 such processes running
[2025-10-21 13:15:25] 2025-10-21 17:15:05,984 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 13:15:25] 2025-10-21 17:15:05,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 13:15:25] 2025-10-21 17:15:05,984 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 13:15:25] 2025-10-21 17:15:18,747 | INFO     | [monitor] cgroup control has ended
[2025-10-21 13:15:25] 2025-10-21 17:15:19,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475735938880)>', '<ExcThread(monitor, started 140475000407808)>']
[2025-10-21 13:15:25] 2025-10-21 17:15:20,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 13:15:25] 2025-10-21 17:15:20,077 | INFO     | [monitor] control thread has ended
[2025-10-21 13:15:25] 2025-10-21 17:15:24,883 | INFO     | all workflow threads have been joined
[2025-10-21 13:15:25] 2025-10-21 17:15:24,883 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 13:15:25] 2025-10-21 17:15:24,883 | INFO     | traces error code: 0
[2025-10-21 13:15:25] 2025-10-21 17:15:24,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 13:15:25] 2025-10-21 17:15:25,144 [wrapper] ==== pilot stdout END ====
[2025-10-21 13:15:25] 2025-10-21 17:15:25,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 13:15:25] 2025-10-21 17:15:25,152 [wrapper] pilotpid: 476537
[2025-10-21 13:15:25] 2025-10-21 17:15:25,155 [wrapper] Pilot exit status: 0
[2025-10-21 13:15:25] 2025-10-21 17:15:25,166 [wrapper] pandaids: 6852961522
[2025-10-21 13:15:25] 2025-10-21 17:15:25,240 [wrapper] cleanup supervisor_pilot 2579261 476538
[2025-10-21 13:15:25] 2025-10-21 17:15:25,244 [wrapper] Test setup, not cleaning
[2025-10-21 13:15:25] 2025-10-21 17:15:25,247 [wrapper] apfmon messages muted
[2025-10-21 13:15:25] 2025-10-21 17:15:25,250 [wrapper] ==== wrapper stdout END ====
[2025-10-21 13:15:25] 2025-10-21 17:15:25,253 [wrapper] ==== wrapper stderr END ====
[2025-10-21 13:15:25]  *** Error codes and diagnostics ***
[2025-10-21 13:15:25]     "exeErrorCode": 0,
[2025-10-21 13:15:25]     "exeErrorDiag": "",
[2025-10-21 13:15:25]     "pilotErrorCode": 0,
[2025-10-21 13:15:25]     "pilotErrorDiag": "",
[2025-10-21 13:15:25]  *** Listing of results directory ***
[2025-10-21 13:15:25] total 449256
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 21:53 pilot3.tar.gz
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 22:32 queuedata.json
[2025-10-21 13:15:25] -rwx------. 1 boincer umatlas     36292 Oct 20 22:36 runpilot2-wrapper.sh
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas       100 Oct 21 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 13:15:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 00:04 run_atlas
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas       105 Oct 21 00:04 job.xml
[2025-10-21 13:15:25] -rw-r--r--. 2 boincer umatlas 226106401 Oct 21 00:04 EVNT.46771634._002346.pool.root.1
[2025-10-21 13:15:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:04 start_atlas.sh
[2025-10-21 13:15:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 00:04 shared
[2025-10-21 13:15:25] -rw-r--r--. 2 boincer umatlas    569677 Oct 21 00:04 input.tar.gz
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas         0 Oct 21 00:04 boinc_lockfile
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas      2560 Oct 21 00:04 pandaJob.out
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas    978830 Oct 21 00:06 agis_schedconf.cvmfs.json
[2025-10-21 13:15:25] drwx------. 5 boincer umatlas      4096 Oct 21 00:06 pilot3
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas      6656 Oct 21 13:13 init_data.xml
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas 217575477 Oct 21 13:13 HITS.46771637._059669.pool.root.1
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas       531 Oct 21 13:13 boinc_task_state.xml
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas        95 Oct 21 13:14 pilot_heartbeat.json
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas      1052 Oct 21 13:14 memory_monitor_summary.json
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas   1560740 Oct 21 13:14 agis_ddmendpoints.agis.ALL.json
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas    864802 Oct 21 13:14 log.46771637._059669.job.log.tgz.1
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas      7831 Oct 21 13:14 heartbeat.json
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 13:15 boinc_mmap_file
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas        28 Oct 21 13:15 wrapper_checkpoint.txt
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas      5081 Oct 21 13:15 pilotlog.txt
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas   5359919 Oct 21 13:15 log.46771637._059669.job.log.1
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas       357 Oct 21 13:15 output.list
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas       620 Oct 21 13:15 runtime_log
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas   6246400 Oct 21 13:15 result.tar.gz
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas       659 Oct 21 13:15 TDfNDmGQHV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmG50NDmkTYHan.diag
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas      8689 Oct 21 13:15 runtime_log.err
[2025-10-21 13:15:25] -rw-r--r--. 1 boincer umatlas     21035 Oct 21 13:15 stderr.txt
[2025-10-21 13:15:25] HITS file was successfully produced:
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas 217575477 Oct 21 13:13 shared/HITS.pool.root.1
[2025-10-21 13:15:25]  *** Contents of shared directory: ***
[2025-10-21 13:15:25] total 439968
[2025-10-21 13:15:25] -rw-r--r--. 2 boincer umatlas 226106401 Oct 21 00:04 ATLAS.root_0
[2025-10-21 13:15:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:04 start_atlas.sh
[2025-10-21 13:15:25] -rw-r--r--. 2 boincer umatlas    569677 Oct 21 00:04 input.tar.gz
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas 217575477 Oct 21 13:13 HITS.pool.root.1
[2025-10-21 13:15:25] -rw-------. 1 boincer umatlas   6246400 Oct 21 13:15 result.tar.gz
13:15:27 (461275): run_atlas exited; CPU time 62761.141112
13:15:27 (461275): called boinc_finish(0)

</stderr_txt>
]]>

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