Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:18 (972915): wrapper (7.7.26015): starting
00:04:18 (972915): wrapper: running run_atlas (--nthreads 9)
[2025-10-21 00:04:18] Arguments: --nthreads 9
[2025-10-21 00:04:18] Threads: 9
[2025-10-21 00:04:18] Checking for CVMFS
[2025-10-21 00:04:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 00:04:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 00:04:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 00:04:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 00:04:20] 2.13.2.0 4296 10758 206904 151945 2 310 27619447 32935936 23397 16776704 0 39932113 99.627 36526742 28233 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-21 00:04:20] CVMFS is ok
[2025-10-21 00:04:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 00:04:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 00:04:20] Further information can be found at the LHC@home message board.
[2025-10-21 00:04:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 00:04:20] Checking for apptainer binary...
[2025-10-21 00:04:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 00:04:20] Running /usr/bin/apptainer --version
[2025-10-21 00:04:21] apptainer version 1.4.3-1.el9
[2025-10-21 00:04:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 00:04:22] c-8-24.aglt2.org
[2025-10-21 00:04:22] apptainer works
[2025-10-21 00:04:22] Set ATHENA_PROC_NUMBER=9
[2025-10-21 00:04:22] Set ATHENA_CORE_NUMBER=9
[2025-10-21 00:04:22] Starting ATLAS job with PandaID=6852961532
[2025-10-21 00:04:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 09:14:27]  *** The last 200 lines of the pilot log: ***
[2025-10-21 09:14:27] 2025-10-21 13:13:27,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 09:14:27] 2025-10-21 13:13:27,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 09:14:27] 2025-10-21 13:13:27,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 09:14:27] 2025-10-21 13:13:27,345 | INFO     | fitting pss+swap vs Time
[2025-10-21 09:14:27] 2025-10-21 13:13:27,345 | INFO     | sum of square deviations: 48014632358.84164
[2025-10-21 09:14:27] 2025-10-21 13:13:27,351 | INFO     | sum of deviations: 314640549188.49493
[2025-10-21 09:14:27] 2025-10-21 13:13:27,351 | INFO     | mean x: 1761035997.5512104
[2025-10-21 09:14:27] 2025-10-21 13:13:27,351 | INFO     | mean y: 2112527.545623836
[2025-10-21 09:14:27] 2025-10-21 13:13:27,351 | INFO     | -- intersect: -11537980693.811481
[2025-10-21 09:14:27] 2025-10-21 13:13:27,351 | INFO     | intersect: -11537980693.811481
[2025-10-21 09:14:27] 2025-10-21 13:13:27,352 | INFO     | chi2: 2.8318894124150495
[2025-10-21 09:14:27] 2025-10-21 13:13:27,353 | INFO     | sum of square deviations: 46685897722.30818
[2025-10-21 09:14:27] 2025-10-21 13:13:27,361 | INFO     | sum of deviations: 310189522067.0186
[2025-10-21 09:14:27] 2025-10-21 13:13:27,361 | INFO     | mean x: 1761035845.056391
[2025-10-21 09:14:27] 2025-10-21 13:13:27,362 | INFO     | mean y: 2112013.832706767
[2025-10-21 09:14:27] 2025-10-21 13:13:27,362 | INFO     | -- intersect: -11698527660.488264
[2025-10-21 09:14:27] 2025-10-21 13:13:27,362 | INFO     | intersect: -11698527660.488264
[2025-10-21 09:14:27] 2025-10-21 13:13:27,363 | INFO     | chi2: 2.827375193583092
[2025-10-21 09:14:27] 2025-10-21 13:13:27,363 | INFO     | current chi2=2.827375193583092 (change=0.15940660719895847 %)
[2025-10-21 09:14:27] 2025-10-21 13:13:27,363 | INFO     | right removable region: 531
[2025-10-21 09:14:27] 2025-10-21 13:13:27,364 | INFO     | sum of square deviations: 46685749675.41911
[2025-10-21 09:14:27] 2025-10-21 13:13:27,372 | INFO     | sum of deviations: 204844553093.38162
[2025-10-21 09:14:27] 2025-10-21 13:13:27,376 | INFO     | mean x: 1761036150.0545113
[2025-10-21 09:14:27] 2025-10-21 13:13:27,377 | INFO     | mean y: 2125105.986842105
[2025-10-21 09:14:27] 2025-10-21 13:13:27,377 | INFO     | -- intersect: -7724829385.420652
[2025-10-21 09:14:27] 2025-10-21 13:13:27,377 | INFO     | intersect: -7724829385.420652
[2025-10-21 09:14:27] 2025-10-21 13:13:27,378 | INFO     | chi2: 0.5980506564257447
[2025-10-21 09:14:27] 2025-10-21 13:13:27,378 | INFO     | current chi2=0.5980506564257447 (change=78.88156741559608 %)
[2025-10-21 09:14:27] 2025-10-21 13:13:27,379 | INFO     | sum of square deviations: 45381644338.09882
[2025-10-21 09:14:27] 2025-10-21 13:13:27,386 | INFO     | sum of deviations: 160394396647.704
[2025-10-21 09:14:27] 2025-10-21 13:13:27,387 | INFO     | mean x: 1761036302.5559773
[2025-10-21 09:14:27] 2025-10-21 13:13:27,387 | INFO     | mean y: 2130296.332068311
[2025-10-21 09:14:27] 2025-10-21 13:13:27,387 | INFO     | -- intersect: -6221979899.385063
[2025-10-21 09:14:27] 2025-10-21 13:13:27,387 | INFO     | intersect: -6221979899.385063
[2025-10-21 09:14:27] 2025-10-21 13:13:27,388 | INFO     | chi2: 0.2860282393469374
[2025-10-21 09:14:27] 2025-10-21 13:13:27,388 | INFO     | current chi2=0.2860282393469374 (change=52.17324213698087 %)
[2025-10-21 09:14:27] 2025-10-21 13:13:27,389 | INFO     | sum of square deviations: 44102179426.70445
[2025-10-21 09:14:27] 2025-10-21 13:13:27,396 | INFO     | sum of deviations: 150618154104.93484
[2025-10-21 09:14:27] 2025-10-21 13:13:27,397 | INFO     | mean x: 1761036455.0498085
[2025-10-21 09:14:27] 2025-10-21 13:13:27,397 | INFO     | mean y: 2131457.3486590036
[2025-10-21 09:14:27] 2025-10-21 13:13:27,397 | INFO     | -- intersect: -6012175853.969644
[2025-10-21 09:14:27] 2025-10-21 13:13:27,397 | INFO     | intersect: -6012175853.969644
[2025-10-21 09:14:27] 2025-10-21 13:13:27,398 | INFO     | chi2: 0.2617566483109498
[2025-10-21 09:14:27] 2025-10-21 13:13:27,398 | INFO     | current chi2=0.2617566483109498 (change=8.485732419779504 %)
[2025-10-21 09:14:27] 2025-10-21 13:13:27,398 | INFO     | left removable region: 30
[2025-10-21 09:14:27] 2025-10-21 13:13:27,399 | INFO     | sum of square deviations: 38990827788.56697
[2025-10-21 09:14:27] 2025-10-21 13:13:27,406 | INFO     | sum of deviations: 129730473438.68259
[2025-10-21 09:14:27] 2025-10-21 13:13:27,406 | INFO     | mean x: 1761036729.536926
[2025-10-21 09:14:27] 2025-10-21 13:13:27,406 | INFO     | mean y: 2133130.2874251497
[2025-10-21 09:14:27] 2025-10-21 13:13:27,406 | INFO     | -- intersect: -5857196912.782974
[2025-10-21 09:14:27] 2025-10-21 13:13:27,407 | INFO     | intersect: -5857196912.782974
[2025-10-21 09:14:27] 2025-10-21 13:13:27,407 | INFO     | chi2: 0.2513377624350177
[2025-10-21 09:14:27] 2025-10-21 13:13:27,408 | INFO     | -- intersect: -5857196912.782974
[2025-10-21 09:14:27] 2025-10-21 13:13:27,408 | INFO     | current memory leak: 3.33 B/s (using 501 data points, chi2=0.25)
[2025-10-21 09:14:27] 2025-10-21 13:13:27,408 | INFO     | could have reported an average CPU frequency of 2602 MHz (21 samples)
[2025-10-21 09:14:27] 2025-10-21 13:13:27,409 | INFO     | ..............................
[2025-10-21 09:14:27] 2025-10-21 13:13:27,409 | INFO     | . Timing measurements:
[2025-10-21 09:14:27] 2025-10-21 13:13:27,409 | INFO     | . get job = 1 s
[2025-10-21 09:14:27] 2025-10-21 13:13:27,409 | INFO     | . initial setup = 4 s
[2025-10-21 09:14:27] 2025-10-21 13:13:27,409 | INFO     | . payload setup = 33 s
[2025-10-21 09:14:27] 2025-10-21 13:13:27,409 | INFO     | . stage-in = 0 s
[2025-10-21 09:14:27] 2025-10-21 13:13:27,409 | INFO     | . payload execution = 32777 s
[2025-10-21 09:14:27] 2025-10-21 13:13:27,410 | INFO     | . stage-out = 2 s
[2025-10-21 09:14:27] 2025-10-21 13:13:27,410 | INFO     | . log creation = 0 s
[2025-10-21 09:14:27] 2025-10-21 13:13:27,410 | INFO     | ..............................
[2025-10-21 09:14:27] 2025-10-21 13:13:27,522 | INFO     | 
[2025-10-21 09:14:27] 2025-10-21 13:13:27,522 | INFO     | job summary report
[2025-10-21 09:14:27] 2025-10-21 13:13:27,522 | INFO     | --------------------------------------------------
[2025-10-21 09:14:27] 2025-10-21 13:13:27,522 | INFO     | PanDA job id: 6852961532
[2025-10-21 09:14:27] 2025-10-21 13:13:27,522 | INFO     | task id: 46771637
[2025-10-21 09:14:27] 2025-10-21 13:13:27,522 | INFO     | errors: (none)
[2025-10-21 09:14:27] 2025-10-21 13:13:27,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 09:14:27] 2025-10-21 13:13:27,523 | INFO     | pilot state: finished 
[2025-10-21 09:14:27] 2025-10-21 13:13:27,523 | INFO     | transexitcode: 0
[2025-10-21 09:14:27] 2025-10-21 13:13:27,523 | INFO     | exeerrorcode: 0
[2025-10-21 09:14:27] 2025-10-21 13:13:27,523 | INFO     | exeerrordiag: 
[2025-10-21 09:14:27] 2025-10-21 13:13:27,523 | INFO     | exitcode: 0
[2025-10-21 09:14:27] 2025-10-21 13:13:27,523 | INFO     | exitmsg: OK
[2025-10-21 09:14:27] 2025-10-21 13:13:27,523 | INFO     | cpuconsumptiontime: 57336 s
[2025-10-21 09:14:27] 2025-10-21 13:13:27,523 | INFO     | nevents: 400
[2025-10-21 09:14:27] 2025-10-21 13:13:27,523 | INFO     | neventsw: 0
[2025-10-21 09:14:27] 2025-10-21 13:13:27,523 | INFO     | pid: 1011267
[2025-10-21 09:14:27] 2025-10-21 13:13:27,524 | INFO     | pgrp: 1011267
[2025-10-21 09:14:27] 2025-10-21 13:13:27,524 | INFO     | corecount: 9
[2025-10-21 09:14:27] 2025-10-21 13:13:27,524 | INFO     | event service: False
[2025-10-21 09:14:27] 2025-10-21 13:13:27,524 | INFO     | sizes: {0: 2348103, 1: 2348788, 2: 2348987, 13: 2348987, 25: 2349043, 26: 2349333, 36: 2349489, 32813: 2388288, 32814: 2388287, 32816: 2397341, 32818: 2397397, 328
[2025-10-21 09:14:27] 2025-10-21 13:13:27,524 | INFO     | --------------------------------------------------
[2025-10-21 09:14:27] 2025-10-21 13:13:27,524 | INFO     | 
[2025-10-21 09:14:27] 2025-10-21 13:13:27,524 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-21 09:14:27] 2025-10-21 13:13:27,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,550 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 09:14:27] 2025-10-21 13:13:27,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 09:14:27] 2025-10-21 13:13:27,552 | INFO     | job 6852961532 has completed (purged errors)
[2025-10-21 09:14:27] 2025-10-21 13:13:27,552 | INFO     | overall cleanup function is called
[2025-10-21 09:14:27] 2025-10-21 13:13:28,566 | INFO     | --- collectZombieJob: --- 10, [1011267]
[2025-10-21 09:14:27] 2025-10-21 13:13:28,566 | INFO     | zombie collector waiting for pid 1011267
[2025-10-21 09:14:27] 2025-10-21 13:13:28,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 09:14:27] 2025-10-21 13:13:28,567 | INFO     | collected zombie processes
[2025-10-21 09:14:27] 2025-10-21 13:13:28,567 | INFO     | will attempt to kill all subprocesses of pid=1011267
[2025-10-21 09:14:27] 2025-10-21 13:13:28,962 | INFO     | process IDs to be killed: [1011267] (in reverse order)
[2025-10-21 09:14:27] 2025-10-21 13:13:29,069 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 09:14:27] 2025-10-21 13:13:29,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 09:14:27] 2025-10-21 13:13:29,082 | INFO     | did not find any defunct processes belonging to 1011267
[2025-10-21 09:14:27] 2025-10-21 13:13:29,094 | INFO     | did not find any defunct processes belonging to 1011267
[2025-10-21 09:14:27] 2025-10-21 13:13:29,094 | INFO     | ready for new job
[2025-10-21 09:14:27] 2025-10-21 13:13:29,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 09:14:27] 2025-10-21 13:13:29,098 | INFO     | ***************************************
[2025-10-21 09:14:27] 2025-10-21 13:13:29,098 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 09:14:27] 2025-10-21 13:13:29,099 | INFO     | ***************************************
[2025-10-21 09:14:27] 2025-10-21 13:13:29,099 | INFO     | 
[2025-10-21 09:14:27] 2025-10-21 13:13:29,114 | INFO     | architecture information:
[2025-10-21 09:14:27] 2025-10-21 13:13:29,130 | INFO     | executing command: cat /etc/os-release
[2025-10-21 09:14:27] 2025-10-21 13:13:29,160 | INFO     | cat /etc/os-release:
[2025-10-21 09:14:27] NAME="CentOS Linux"
[2025-10-21 09:14:27] VERSION="7 (Core)"
[2025-10-21 09:14:27] ID="centos"
[2025-10-21 09:14:27] ID_LIKE="rhel fedora"
[2025-10-21 09:14:27] VERSION_ID="7"
[2025-10-21 09:14:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 09:14:27] ANSI_COLOR="0;31"
[2025-10-21 09:14:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 09:14:27] HOME_URL="https://www.centos.org/"
[2025-10-21 09:14:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 09:14:27] 
[2025-10-21 09:14:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 09:14:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 09:14:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 09:14:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 09:14:27] 
[2025-10-21 09:14:27] 2025-10-21 13:13:29,161 | INFO     | ***************************************
[2025-10-21 09:14:27] 2025-10-21 13:13:29,665 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-21 09:14:27] 2025-10-21 13:13:29,690 | INFO     | sufficient remaining disk space (75113693184 B)
[2025-10-21 09:14:27] 2025-10-21 13:13:29,690 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 09:14:27] 2025-10-21 13:13:29,690 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 09:14:27] 2025-10-21 13:13:29,690 | INFO     | update_server=False
[2025-10-21 09:14:27] 2025-10-21 13:13:29,690 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 09:14:27] 2025-10-21 13:13:30,179 | INFO     | all job control threads have been joined
[2025-10-21 09:14:27] 2025-10-21 13:13:30,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 09:14:27] 2025-10-21 13:13:30,477 | INFO     | aborting loop
[2025-10-21 09:14:27] 2025-10-21 13:13:30,590 | INFO     | all payload control threads have been joined
[2025-10-21 09:14:27] 2025-10-21 13:13:30,696 | INFO     | [job] retrieve thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:30,706 | INFO     | all data control threads have been joined
[2025-10-21 09:14:27] 2025-10-21 13:13:30,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 09:14:27] 2025-10-21 13:13:31,185 | INFO     | [job] control thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,197 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,414 | INFO     | [payload] validate_post thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,420 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,474 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,483 | INFO     | [job] job monitor thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,597 | INFO     | [payload] control thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,682 | INFO     | [job] validate thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,684 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,720 | INFO     | [data] control thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,920 | INFO     | [data] copytool_in thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:31,927 | INFO     | [payload] failed_post thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:32,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 09:14:27] 2025-10-21 13:13:32,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 09:14:27] 2025-10-21 13:13:32,987 | INFO     | [data] copytool_out thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:33,541 | INFO     | [job] queue monitor thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:36,154 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 09:14:27] 2025-10-21 13:13:59,328 | INFO     | PID=983069 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 09:14:27] 2025-10-21 13:13:59,329 | INFO     | .. there are 20 such processes running
[2025-10-21 09:14:27] 2025-10-21 13:13:59,329 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 09:14:27] 2025-10-21 13:13:59,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 09:14:27] 2025-10-21 13:13:59,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 09:14:27] 2025-10-21 13:14:21,100 | INFO     | [monitor] cgroup control has ended
[2025-10-21 09:14:27] 2025-10-21 13:14:22,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748942546752)>', '<ExcThread(monitor, started 139748093978368)>']
[2025-10-21 09:14:27] 2025-10-21 13:14:22,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 09:14:27] 2025-10-21 13:14:22,477 | INFO     | [monitor] control thread has ended
[2025-10-21 09:14:27] 2025-10-21 13:14:27,144 | INFO     | all workflow threads have been joined
[2025-10-21 09:14:27] 2025-10-21 13:14:27,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 09:14:27] 2025-10-21 13:14:27,145 | INFO     | traces error code: 0
[2025-10-21 09:14:27] 2025-10-21 13:14:27,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 09:14:27] 2025-10-21 13:14:27,330 [wrapper] ==== pilot stdout END ====
[2025-10-21 09:14:27] 2025-10-21 13:14:27,333 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 09:14:27] 2025-10-21 13:14:27,337 [wrapper] pilotpid: 983069
[2025-10-21 09:14:27] 2025-10-21 13:14:27,340 [wrapper] Pilot exit status: 0
[2025-10-21 09:14:27] 2025-10-21 13:14:27,370 [wrapper] pandaids: 6852961532
[2025-10-21 09:14:27] 2025-10-21 13:14:27,454 [wrapper] cleanup supervisor_pilot 2096953 983070
[2025-10-21 09:14:27] 2025-10-21 13:14:27,460 [wrapper] Test setup, not cleaning
[2025-10-21 09:14:27] 2025-10-21 13:14:27,463 [wrapper] apfmon messages muted
[2025-10-21 09:14:27] 2025-10-21 13:14:27,468 [wrapper] ==== wrapper stdout END ====
[2025-10-21 09:14:27] 2025-10-21 13:14:27,472 [wrapper] ==== wrapper stderr END ====
[2025-10-21 09:14:27]  *** Error codes and diagnostics ***
[2025-10-21 09:14:27]     "exeErrorCode": 0,
[2025-10-21 09:14:27]     "exeErrorDiag": "",
[2025-10-21 09:14:27]     "pilotErrorCode": 0,
[2025-10-21 09:14:27]     "pilotErrorDiag": "",
[2025-10-21 09:14:27]  *** Listing of results directory ***
[2025-10-21 09:14:27] total 438492
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 21:53 pilot3.tar.gz
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 22:32 queuedata.json
[2025-10-21 09:14:27] -rwx------. 1 boincer umatlas     36292 Oct 20 22:35 runpilot2-wrapper.sh
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas       100 Oct 21 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 09:14:27] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 00:04 run_atlas
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas       105 Oct 21 00:04 job.xml
[2025-10-21 09:14:27] -rw-r--r--. 2 boincer umatlas 226106401 Oct 21 00:04 EVNT.46771634._002346.pool.root.1
[2025-10-21 09:14:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:04 start_atlas.sh
[2025-10-21 09:14:27] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 00:04 shared
[2025-10-21 09:14:27] -rw-r--r--. 2 boincer umatlas    569675 Oct 21 00:04 input.tar.gz
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas         0 Oct 21 00:04 boinc_lockfile
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas      2560 Oct 21 00:04 pandaJob.out
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas    978830 Oct 21 00:05 agis_schedconf.cvmfs.json
[2025-10-21 09:14:27] drwx------. 5 boincer umatlas      4096 Oct 21 00:05 pilot3
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas      6658 Oct 21 09:12 init_data.xml
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas 209626980 Oct 21 09:12 HITS.46771637._059679.pool.root.1
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas       531 Oct 21 09:12 boinc_task_state.xml
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas      1042 Oct 21 09:13 memory_monitor_summary.json
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas   1560740 Oct 21 09:13 agis_ddmendpoints.agis.ALL.json
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas    711912 Oct 21 09:13 log.46771637._059679.job.log.tgz.1
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas      7825 Oct 21 09:13 heartbeat.json
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas        95 Oct 21 09:13 pilot_heartbeat.json
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas        28 Oct 21 09:14 wrapper_checkpoint.txt
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 09:14 boinc_mmap_file
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas      4823 Oct 21 09:14 pilotlog.txt
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas   3976794 Oct 21 09:14 log.46771637._059679.job.log.1
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas       357 Oct 21 09:14 output.list
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas       620 Oct 21 09:14 runtime_log
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas   4710400 Oct 21 09:14 result.tar.gz
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas       656 Oct 21 09:14 s0bLDmIPHV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm140NDmVxXsAn.diag
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas      8694 Oct 21 09:14 runtime_log.err
[2025-10-21 09:14:27] -rw-r--r--. 1 boincer umatlas     21018 Oct 21 09:14 stderr.txt
[2025-10-21 09:14:27] HITS file was successfully produced:
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas 209626980 Oct 21 09:12 shared/HITS.pool.root.1
[2025-10-21 09:14:27]  *** Contents of shared directory: ***
[2025-10-21 09:14:27] total 430708
[2025-10-21 09:14:27] -rw-r--r--. 2 boincer umatlas 226106401 Oct 21 00:04 ATLAS.root_0
[2025-10-21 09:14:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:04 start_atlas.sh
[2025-10-21 09:14:27] -rw-r--r--. 2 boincer umatlas    569675 Oct 21 00:04 input.tar.gz
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas 209626980 Oct 21 09:12 HITS.pool.root.1
[2025-10-21 09:14:27] -rw-------. 1 boincer umatlas   4710400 Oct 21 09:14 result.tar.gz
09:14:29 (972915): run_atlas exited; CPU time 58354.774924
09:14:29 (972915): called boinc_finish(0)

</stderr_txt>
]]>

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