Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:48 (505814): wrapper (7.7.26015): starting
00:11:48 (505814): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 00:11:48] Arguments: --nthreads 8
[2025-10-21 00:11:48] Threads: 8
[2025-10-21 00:11:48] Checking for CVMFS
[2025-10-21 00:11:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 00:11:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 00:11:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 00:11:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 00:11:52] 2.13.2.0 141135 129542 243932 151945 1 446 29483548 39288832 13720 16776704 0 117173837 99.569 133819920 34319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-21 00:11:52] CVMFS is ok
[2025-10-21 00:11:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 00:11:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 00:11:52] Further information can be found at the LHC@home message board.
[2025-10-21 00:11:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 00:11:52] Checking for apptainer binary...
[2025-10-21 00:11:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 00:11:52] Running /usr/bin/apptainer --version
[2025-10-21 00:11:52] apptainer version 1.4.3-1.el9
[2025-10-21 00:11:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 00:11:54] c-210-4.aglt2.org
[2025-10-21 00:11:54] apptainer works
[2025-10-21 00:11:54] Set ATHENA_PROC_NUMBER=8
[2025-10-21 00:11:54] Set ATHENA_CORE_NUMBER=8
[2025-10-21 00:11:54] Starting ATLAS job with PandaID=6852948932
[2025-10-21 00:11:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 05:40:35]  *** The last 200 lines of the pilot log: ***
[2025-10-21 05:40:35] 2025-10-21 09:40:01,538 | INFO     | chi2: 6.428279918911182
[2025-10-21 05:40:35] 2025-10-21 09:40:01,538 | INFO     | current chi2=6.428279918911182 (change=9.166575154383954 %)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,538 | INFO     | right removable region: 312
[2025-10-21 05:40:35] 2025-10-21 09:40:01,538 | INFO     | sum of square deviations: 9508650695.92333
[2025-10-21 05:40:35] 2025-10-21 09:40:01,542 | INFO     | sum of deviations: 77615731771.97449
[2025-10-21 05:40:35] 2025-10-21 09:40:01,542 | INFO     | mean x: 1761030063.3578274
[2025-10-21 05:40:35] 2025-10-21 09:40:01,542 | INFO     | mean y: 2491027.785942492
[2025-10-21 05:40:35] 2025-10-21 09:40:01,542 | INFO     | -- intersect: -14372170678.797213
[2025-10-21 05:40:35] 2025-10-21 09:40:01,542 | INFO     | intersect: -14372170678.797213
[2025-10-21 05:40:35] 2025-10-21 09:40:01,543 | INFO     | chi2: 3.3550593485631905
[2025-10-21 05:40:35] 2025-10-21 09:40:01,543 | INFO     | current chi2=3.3550593485631905 (change=52.59205650118691 %)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,543 | INFO     | sum of square deviations: 9060180338.27272
[2025-10-21 05:40:35] 2025-10-21 09:40:01,546 | INFO     | sum of deviations: 9310455910.40907
[2025-10-21 05:40:35] 2025-10-21 09:40:01,547 | INFO     | mean x: 1761030215.8636363
[2025-10-21 05:40:35] 2025-10-21 09:40:01,547 | INFO     | mean y: 2514240.2954545454
[2025-10-21 05:40:35] 2025-10-21 09:40:01,547 | INFO     | -- intersect: -1807162120.3874905
[2025-10-21 05:40:35] 2025-10-21 09:40:01,547 | INFO     | intersect: -1807162120.3874905
[2025-10-21 05:40:35] 2025-10-21 09:40:01,548 | INFO     | chi2: 1.6322527998658192
[2025-10-21 05:40:35] 2025-10-21 09:40:01,548 | INFO     | current chi2=1.6322527998658192 (change=51.34951038750376 %)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,548 | INFO     | sum of square deviations: 8626035950.600735
[2025-10-21 05:40:35] 2025-10-21 09:40:01,551 | INFO     | sum of deviations: -27859613268.27393
[2025-10-21 05:40:35] 2025-10-21 09:40:01,552 | INFO     | mean x: 1761030368.369637
[2025-10-21 05:40:35] 2025-10-21 09:40:01,552 | INFO     | mean y: 2527261.600660066
[2025-10-21 05:40:35] 2025-10-21 09:40:01,552 | INFO     | -- intersect: 5690148469.931853
[2025-10-21 05:40:35] 2025-10-21 09:40:01,552 | INFO     | intersect: 5690148469.931853
[2025-10-21 05:40:35] 2025-10-21 09:40:01,553 | INFO     | chi2: 1.066716637861132
[2025-10-21 05:40:35] 2025-10-21 09:40:01,553 | INFO     | current chi2=1.066716637861132 (change=34.647584127359295 %)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,553 | INFO     | sum of square deviations: 8206002973.1543455
[2025-10-21 05:40:35] 2025-10-21 09:40:01,556 | INFO     | sum of deviations: -42917673023.060394
[2025-10-21 05:40:35] 2025-10-21 09:40:01,557 | INFO     | mean x: 1761030520.8724833
[2025-10-21 05:40:35] 2025-10-21 09:40:01,557 | INFO     | mean y: 2532719.4194630873
[2025-10-21 05:40:35] 2025-10-21 09:40:01,558 | INFO     | -- intersect: 9212781890.141205
[2025-10-21 05:40:35] 2025-10-21 09:40:01,558 | INFO     | intersect: 9212781890.141205
[2025-10-21 05:40:35] 2025-10-21 09:40:01,558 | INFO     | chi2: 0.963319122770558
[2025-10-21 05:40:35] 2025-10-21 09:40:01,558 | INFO     | current chi2=0.963319122770558 (change=9.693062939179027 %)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,559 | INFO     | left removable region: 40
[2025-10-21 05:40:35] 2025-10-21 09:40:01,559 | INFO     | sum of square deviations: 6240122168.529377
[2025-10-21 05:40:35] 2025-10-21 09:40:01,561 | INFO     | sum of deviations: -18821323028.411785
[2025-10-21 05:40:35] 2025-10-21 09:40:01,562 | INFO     | mean x: 1761030947.9264705
[2025-10-21 05:40:35] 2025-10-21 09:40:01,562 | INFO     | mean y: 2537162.529411765
[2025-10-21 05:40:35] 2025-10-21 09:40:01,562 | INFO     | -- intersect: 5314121044.831135
[2025-10-21 05:40:35] 2025-10-21 09:40:01,562 | INFO     | intersect: 5314121044.831135
[2025-10-21 05:40:35] 2025-10-21 09:40:01,562 | INFO     | chi2: 0.20195198255765703
[2025-10-21 05:40:35] 2025-10-21 09:40:01,563 | INFO     | -- intersect: 5314121044.831135
[2025-10-21 05:40:35] 2025-10-21 09:40:01,563 | INFO     | current memory leak: -3.02 B/s (using 272 data points, chi2=0.20)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,563 | INFO     | could have reported an average CPU frequency of 2599 MHz (14 samples)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,564 | INFO     | ..............................
[2025-10-21 05:40:35] 2025-10-21 09:40:01,564 | INFO     | . Timing measurements:
[2025-10-21 05:40:35] 2025-10-21 09:40:01,564 | INFO     | . get job = 0 s
[2025-10-21 05:40:35] 2025-10-21 09:40:01,564 | INFO     | . initial setup = 13 s
[2025-10-21 05:40:35] 2025-10-21 09:40:01,564 | INFO     | . payload setup = 62 s
[2025-10-21 05:40:35] 2025-10-21 09:40:01,564 | INFO     | . stage-in = 0 s
[2025-10-21 05:40:35] 2025-10-21 09:40:01,564 | INFO     | . payload execution = 19390 s
[2025-10-21 05:40:35] 2025-10-21 09:40:01,565 | INFO     | . stage-out = 2 s
[2025-10-21 05:40:35] 2025-10-21 09:40:01,565 | INFO     | . log creation = 0 s
[2025-10-21 05:40:35] 2025-10-21 09:40:01,565 | INFO     | ..............................
[2025-10-21 05:40:35] 2025-10-21 09:40:01,572 | INFO     | sufficient remaining disk space (53184823296 B)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,572 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,573 | INFO     | size of work directory /tmp/boinchome/slots/3/PanDA_Pilot-6852948932: 4092520 B (within 2537553920 B limit)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,574 | INFO     | pfn file=/tmp/boinchome/slots/3/PanDA_Pilot-6852948932/HITS.46771637._054831.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,574 | INFO     | total size of present files: 0 B (workdir size: 4092520 B)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,574 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/3/PanDA_Pilot-6852948932/HITS.46771637._054831.pool.root.1 since it does not exist
[2025-10-21 05:40:35] 2025-10-21 09:40:01,814 | INFO     | 
[2025-10-21 05:40:35] 2025-10-21 09:40:01,818 | INFO     | job summary report
[2025-10-21 05:40:35] 2025-10-21 09:40:01,818 | INFO     | --------------------------------------------------
[2025-10-21 05:40:35] 2025-10-21 09:40:01,826 | INFO     | PanDA job id: 6852948932
[2025-10-21 05:40:35] 2025-10-21 09:40:01,830 | INFO     | task id: 46771637
[2025-10-21 05:40:35] 2025-10-21 09:40:01,830 | INFO     | errors: (none)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,830 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 05:40:35] 2025-10-21 09:40:01,830 | INFO     | pilot state: finished 
[2025-10-21 05:40:35] 2025-10-21 09:40:01,830 | INFO     | transexitcode: 0
[2025-10-21 05:40:35] 2025-10-21 09:40:01,830 | INFO     | exeerrorcode: 0
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | exeerrordiag: 
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | exitcode: 0
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | exitmsg: OK
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | cpuconsumptiontime: 56119 s
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | nevents: 400
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | neventsw: 0
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | pid: 521788
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | pgrp: 521788
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | corecount: 8
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | event service: False
[2025-10-21 05:40:35] 2025-10-21 09:40:01,831 | INFO     | sizes: {0: 2348102, 1: 2348703, 2: 2348787, 4: 2348815, 5: 2348843, 6: 2348843, 7: 2349198, 8: 2349226, 19: 2349254, 30: 2349282, 42: 2349310, 53: 2349646, 57: 234
[2025-10-21 05:40:35] 2025-10-21 09:40:01,832 | INFO     | --------------------------------------------------
[2025-10-21 05:40:35] 2025-10-21 09:40:01,832 | INFO     | 
[2025-10-21 05:40:35] 2025-10-21 09:40:01,832 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-21 05:40:35] 2025-10-21 09:40:01,857 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,857 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,859 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,859 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 05:40:35] 2025-10-21 09:40:01,860 | INFO     | job 6852948932 has completed (purged errors)
[2025-10-21 05:40:35] 2025-10-21 09:40:01,860 | INFO     | overall cleanup function is called
[2025-10-21 05:40:35] 2025-10-21 09:40:02,118 | INFO     | number of running child processes to parent process 521788: 1
[2025-10-21 05:40:35] 2025-10-21 09:40:02,124 | INFO     | maximum number of monitored processes: 7
[2025-10-21 05:40:35] 2025-10-21 09:40:02,124 | INFO     | aborting job monitoring since job object (job id=6852948932) has expired
[2025-10-21 05:40:35] 2025-10-21 09:40:02,869 | INFO     | --- collectZombieJob: --- 10, [521788]
[2025-10-21 05:40:35] 2025-10-21 09:40:02,869 | INFO     | zombie collector waiting for pid 521788
[2025-10-21 05:40:35] 2025-10-21 09:40:02,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 05:40:35] 2025-10-21 09:40:02,869 | INFO     | collected zombie processes
[2025-10-21 05:40:35] 2025-10-21 09:40:02,870 | INFO     | will attempt to kill all subprocesses of pid=521788
[2025-10-21 05:40:35] 2025-10-21 09:40:03,308 | INFO     | process IDs to be killed: [521788] (in reverse order)
[2025-10-21 05:40:35] 2025-10-21 09:40:03,400 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 05:40:35] 2025-10-21 09:40:03,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 05:40:35] 2025-10-21 09:40:03,409 | INFO     | did not find any defunct processes belonging to 521788
[2025-10-21 05:40:35] 2025-10-21 09:40:03,420 | INFO     | did not find any defunct processes belonging to 521788
[2025-10-21 05:40:35] 2025-10-21 09:40:03,420 | INFO     | ready for new job
[2025-10-21 05:40:35] 2025-10-21 09:40:03,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 05:40:35] 2025-10-21 09:40:03,423 | INFO     | ***************************************
[2025-10-21 05:40:35] 2025-10-21 09:40:03,423 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 05:40:35] 2025-10-21 09:40:03,423 | INFO     | ***************************************
[2025-10-21 05:40:35] 2025-10-21 09:40:03,423 | INFO     | 
[2025-10-21 05:40:35] 2025-10-21 09:40:03,425 | INFO     | architecture information:
[2025-10-21 05:40:35] 2025-10-21 09:40:03,426 | INFO     | executing command: cat /etc/os-release
[2025-10-21 05:40:35] 2025-10-21 09:40:03,447 | INFO     | cat /etc/os-release:
[2025-10-21 05:40:35] NAME="CentOS Linux"
[2025-10-21 05:40:35] VERSION="7 (Core)"
[2025-10-21 05:40:35] ID="centos"
[2025-10-21 05:40:35] ID_LIKE="rhel fedora"
[2025-10-21 05:40:35] VERSION_ID="7"
[2025-10-21 05:40:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 05:40:35] ANSI_COLOR="0;31"
[2025-10-21 05:40:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 05:40:35] HOME_URL="https://www.centos.org/"
[2025-10-21 05:40:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 05:40:35] 
[2025-10-21 05:40:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 05:40:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 05:40:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 05:40:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 05:40:35] 
[2025-10-21 05:40:35] 2025-10-21 09:40:03,447 | INFO     | ***************************************
[2025-10-21 05:40:35] 2025-10-21 09:40:03,951 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-21 05:40:35] 2025-10-21 09:40:03,999 | INFO     | sufficient remaining disk space (53191114752 B)
[2025-10-21 05:40:35] 2025-10-21 09:40:04,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 05:40:35] 2025-10-21 09:40:04,000 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 05:40:35] 2025-10-21 09:40:04,000 | INFO     | update_server=False
[2025-10-21 05:40:35] 2025-10-21 09:40:04,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 05:40:35] 2025-10-21 09:40:04,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 05:40:35] 2025-10-21 09:40:04,001 | INFO     | aborting loop
[2025-10-21 05:40:35] 2025-10-21 09:40:04,268 | INFO     | all job control threads have been joined
[2025-10-21 05:40:35] 2025-10-21 09:40:04,683 | INFO     | all data control threads have been joined
[2025-10-21 05:40:35] 2025-10-21 09:40:05,005 | INFO     | [job] retrieve thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:05,006 | INFO     | [job] job monitor thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:05,051 | INFO     | all payload control threads have been joined
[2025-10-21 05:40:35] 2025-10-21 09:40:05,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:05,179 | INFO     | [payload] failed_post thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:05,274 | INFO     | [job] control thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:05,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 05:40:35] 2025-10-21 09:40:05,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 05:40:35] 2025-10-21 09:40:05,669 | INFO     | [payload] validate_post thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:05,708 | INFO     | [data] control thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:05,923 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:06,075 | INFO     | [data] copytool_in thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:06,086 | INFO     | [payload] control thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:06,329 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:06,402 | INFO     | [job] validate thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:06,438 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:06,829 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 05:40:35] 2025-10-21 09:40:07,385 | INFO     | [data] copytool_out thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:07,835 | INFO     | [job] queue monitor thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:09,461 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 05:40:35] 2025-10-21 09:40:14,177 | INFO     | [monitor] cgroup control has ended
[2025-10-21 05:40:35] 2025-10-21 09:40:14,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182675089216)>', '<ExcThread(monitor, started 140181877282560)>']
[2025-10-21 05:40:35] 2025-10-21 09:40:19,286 | INFO     | all workflow threads have been joined
[2025-10-21 05:40:35] 2025-10-21 09:40:19,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 05:40:35] 2025-10-21 09:40:19,286 | INFO     | traces error code: 0
[2025-10-21 05:40:35] 2025-10-21 09:40:19,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 05:40:35] 2025-10-21 09:40:34,629 | INFO     | PID=510508 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 05:40:35] 2025-10-21 09:40:34,629 | INFO     | .. there are 12 such processes running
[2025-10-21 05:40:35] 2025-10-21 09:40:34,630 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 05:40:35] 2025-10-21 09:40:34,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 05:40:35] 2025-10-21 09:40:34,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 05:40:35] 2025-10-21 09:40:34,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 05:40:35] 2025-10-21 09:40:34,630 | INFO     | [monitor] control thread has ended
[2025-10-21 05:40:35] 2025-10-21 09:40:34,814 [wrapper] ==== pilot stdout END ====
[2025-10-21 05:40:35] 2025-10-21 09:40:34,857 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 05:40:35] 2025-10-21 09:40:34,921 [wrapper] pilotpid: 510508
[2025-10-21 05:40:35] 2025-10-21 09:40:34,990 [wrapper] Pilot exit status: 0
[2025-10-21 05:40:35] 2025-10-21 09:40:35,079 [wrapper] pandaids: 6852948932
[2025-10-21 05:40:35] 2025-10-21 09:40:35,131 [wrapper] cleanup supervisor_pilot 1102579 510509
[2025-10-21 05:40:35] 2025-10-21 09:40:35,134 [wrapper] Test setup, not cleaning
[2025-10-21 05:40:35] 2025-10-21 09:40:35,137 [wrapper] apfmon messages muted
[2025-10-21 05:40:35] 2025-10-21 09:40:35,141 [wrapper] ==== wrapper stdout END ====
[2025-10-21 05:40:35] 2025-10-21 09:40:35,144 [wrapper] ==== wrapper stderr END ====
[2025-10-21 05:40:35]  *** Error codes and diagnostics ***
[2025-10-21 05:40:35]     "exeErrorCode": 0,
[2025-10-21 05:40:35]     "exeErrorDiag": "",
[2025-10-21 05:40:35]     "pilotErrorCode": 0,
[2025-10-21 05:40:35]     "pilotErrorDiag": "",
[2025-10-21 05:40:35]  *** Listing of results directory ***
[2025-10-21 05:40:35] total 439256
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 18:52 pilot3.tar.gz
[2025-10-21 05:40:35] -rwx------. 1 boincer umatlas     36292 Oct 20 19:04 runpilot2-wrapper.sh
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 19:04 queuedata.json
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas       100 Oct 21 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 05:40:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 00:11 run_atlas
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas       105 Oct 21 00:11 job.xml
[2025-10-21 05:40:35] -rw-r--r--. 2 boincer umatlas 226716737 Oct 21 00:11 EVNT.46771634._002066.pool.root.1
[2025-10-21 05:40:35] -rw-r--r--. 2 boincer umatlas    569673 Oct 21 00:11 input.tar.gz
[2025-10-21 05:40:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:11 start_atlas.sh
[2025-10-21 05:40:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 00:11 shared
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas         0 Oct 21 00:11 boinc_lockfile
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas      2559 Oct 21 00:11 pandaJob.out
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas    978830 Oct 21 00:13 agis_schedconf.cvmfs.json
[2025-10-21 05:40:35] drwx------. 5 boincer umatlas      4096 Oct 21 00:13 pilot3
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas       531 Oct 21 05:38 boinc_task_state.xml
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas 212999239 Oct 21 05:39 HITS.46771637._054831.pool.root.1
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas        95 Oct 21 05:39 pilot_heartbeat.json
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas      1044 Oct 21 05:39 memory_monitor_summary.json
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas   1560740 Oct 21 05:39 agis_ddmendpoints.agis.ALL.json
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas    545182 Oct 21 05:39 log.46771637._054831.job.log.tgz.1
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas      7830 Oct 21 05:40 heartbeat.json
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas      6660 Oct 21 05:40 init_data.xml
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 05:40 boinc_mmap_file
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas        28 Oct 21 05:40 wrapper_checkpoint.txt
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas       822 Oct 21 05:40 pilotlog.txt
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas   2546411 Oct 21 05:40 log.46771637._054831.job.log.1
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas       357 Oct 21 05:40 output.list
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas       620 Oct 21 05:40 runtime_log
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas   3112960 Oct 21 05:40 result.tar.gz
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas      8699 Oct 21 05:40 runtime_log.err
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas       656 Oct 21 05:40 94QLDmO6DV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmI1zNDmORI9un.diag
[2025-10-21 05:40:35] -rw-r--r--. 1 boincer umatlas     21491 Oct 21 05:40 stderr.txt
[2025-10-21 05:40:35] HITS file was successfully produced:
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas 212999239 Oct 21 05:39 shared/HITS.pool.root.1
[2025-10-21 05:40:35]  *** Contents of shared directory: ***
[2025-10-21 05:40:35] total 433032
[2025-10-21 05:40:35] -rw-r--r--. 2 boincer umatlas 226716737 Oct 21 00:11 ATLAS.root_0
[2025-10-21 05:40:35] -rw-r--r--. 2 boincer umatlas    569673 Oct 21 00:11 input.tar.gz
[2025-10-21 05:40:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:11 start_atlas.sh
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas 212999239 Oct 21 05:39 HITS.pool.root.1
[2025-10-21 05:40:35] -rw-------. 1 boincer umatlas   3112960 Oct 21 05:40 result.tar.gz
05:40:36 (505814): run_atlas exited; CPU time 56696.782005
05:40:36 (505814): called boinc_finish(0)

</stderr_txt>
]]>

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