Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:08 (477488): wrapper (7.7.26015): starting
00:04:08 (477488): wrapper: running run_atlas (--nthreads 12)
[2025-10-21 00:04:08] Arguments: --nthreads 12
[2025-10-21 00:04:08] Threads: 12
[2025-10-21 00:04:08] Checking for CVMFS
[2025-10-21 00:04:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 00:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 00:04:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 00:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 00:04:11] 2.13.2.0 141135 129534 242712 151945 1 446 29471382 39288832 13044 16776704 0 117130768 99.569 133819919 34319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-21 00:04:11] CVMFS is ok
[2025-10-21 00:04:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 00:04:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 00:04:11] Further information can be found at the LHC@home message board.
[2025-10-21 00:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 00:04:11] Checking for apptainer binary...
[2025-10-21 00:04:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 00:04:11] Running /usr/bin/apptainer --version
[2025-10-21 00:04:12] apptainer version 1.4.3-1.el9
[2025-10-21 00:04:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 00:04:12] c-210-4.aglt2.org
[2025-10-21 00:04:12] apptainer works
[2025-10-21 00:04:13] Set ATHENA_PROC_NUMBER=12
[2025-10-21 00:04:13] Set ATHENA_CORE_NUMBER=12
[2025-10-21 00:04:13] Starting ATLAS job with PandaID=6852956784
[2025-10-21 00:04:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 07:07:36]  *** The last 200 lines of the pilot log: ***
[2025-10-21 07:07:36] 2025-10-21 11:06:50,290 | INFO     | current chi2=7.493706346926385 (change=8.466166126670549 %)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,290 | INFO     | right removable region: 405
[2025-10-21 07:07:36] 2025-10-21 11:06:50,291 | INFO     | sum of square deviations: 20751909040.92623
[2025-10-21 07:07:36] 2025-10-21 11:06:50,296 | INFO     | sum of deviations: 270404389523.468
[2025-10-21 07:07:36] 2025-10-21 11:06:50,296 | INFO     | mean x: 1761032429.7832513
[2025-10-21 07:07:36] 2025-10-21 11:06:50,296 | INFO     | mean y: 2627967.039408867
[2025-10-21 07:07:36] 2025-10-21 11:06:50,296 | INFO     | -- intersect: -22944219870.788017
[2025-10-21 07:07:36] 2025-10-21 11:06:50,296 | INFO     | intersect: -22944219870.788017
[2025-10-21 07:07:36] 2025-10-21 11:06:50,297 | INFO     | chi2: 4.213675020509356
[2025-10-21 07:07:36] 2025-10-21 11:06:50,297 | INFO     | current chi2=4.213675020509356 (change=48.53096565737494 %)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,298 | INFO     | sum of square deviations: 19994535444.86289
[2025-10-21 07:07:36] 2025-10-21 11:06:50,302 | INFO     | sum of deviations: 167660115665.03018
[2025-10-21 07:07:36] 2025-10-21 11:06:50,303 | INFO     | mean x: 1761032582.2917705
[2025-10-21 07:07:36] 2025-10-21 11:06:50,303 | INFO     | mean y: 2648647.281795511
[2025-10-21 07:07:36] 2025-10-21 11:06:50,303 | INFO     | -- intersect: -14764132369.017517
[2025-10-21 07:07:36] 2025-10-21 11:06:50,303 | INFO     | intersect: -14764132369.017517
[2025-10-21 07:07:36] 2025-10-21 11:06:50,304 | INFO     | chi2: 2.224063973973158
[2025-10-21 07:07:36] 2025-10-21 11:06:50,304 | INFO     | current chi2=2.224063973973158 (change=47.21795195054437 %)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,305 | INFO     | sum of square deviations: 19255837701.838356
[2025-10-21 07:07:36] 2025-10-21 11:06:50,309 | INFO     | sum of deviations: 108477620580.97975
[2025-10-21 07:07:36] 2025-10-21 11:06:50,309 | INFO     | mean x: 1761032734.7979798
[2025-10-21 07:07:36] 2025-10-21 11:06:50,309 | INFO     | mean y: 2660859.224747475
[2025-10-21 07:07:36] 2025-10-21 11:06:50,309 | INFO     | -- intersect: -9918104146.904408
[2025-10-21 07:07:36] 2025-10-21 11:06:50,310 | INFO     | intersect: -9918104146.904408
[2025-10-21 07:07:36] 2025-10-21 11:06:50,310 | INFO     | chi2: 1.5962541204525955
[2025-10-21 07:07:36] 2025-10-21 11:06:50,310 | INFO     | current chi2=1.5962541204525955 (change=28.228048332576392 %)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,311 | INFO     | sum of square deviations: 18535583310.38889
[2025-10-21 07:07:36] 2025-10-21 11:06:50,315 | INFO     | sum of deviations: 60090228866.72387
[2025-10-21 07:07:36] 2025-10-21 11:06:50,315 | INFO     | mean x: 1761032887.3017902
[2025-10-21 07:07:36] 2025-10-21 11:06:50,316 | INFO     | mean y: 2671100.6803069054
[2025-10-21 07:07:36] 2025-10-21 11:06:50,316 | INFO     | -- intersect: -5706394940.984606
[2025-10-21 07:07:36] 2025-10-21 11:06:50,316 | INFO     | intersect: -5706394940.984606
[2025-10-21 07:07:36] 2025-10-21 11:06:50,317 | INFO     | chi2: 1.1728288695142426
[2025-10-21 07:07:36] 2025-10-21 11:06:50,317 | INFO     | current chi2=1.1728288695142426 (change=26.526180607026195 %)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,317 | INFO     | sum of square deviations: 17833491821.81341
[2025-10-21 07:07:36] 2025-10-21 11:06:50,321 | INFO     | sum of deviations: 21758494956.062195
[2025-10-21 07:07:36] 2025-10-21 11:06:50,322 | INFO     | mean x: 1761033039.8082902
[2025-10-21 07:07:36] 2025-10-21 11:06:50,322 | INFO     | mean y: 2679418.730569948
[2025-10-21 07:07:36] 2025-10-21 11:06:50,322 | INFO     | -- intersect: -2145942337.2880015
[2025-10-21 07:07:36] 2025-10-21 11:06:50,322 | INFO     | intersect: -2145942337.2880015
[2025-10-21 07:07:36] 2025-10-21 11:06:50,323 | INFO     | chi2: 0.8937767978457285
[2025-10-21 07:07:36] 2025-10-21 11:06:50,323 | INFO     | current chi2=0.8937767978457285 (change=23.793076630530994 %)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,323 | INFO     | left removable region: 50
[2025-10-21 07:07:36] 2025-10-21 11:06:50,324 | INFO     | sum of square deviations: 13872438995.171843
[2025-10-21 07:07:36] 2025-10-21 11:06:50,327 | INFO     | sum of deviations: 11941451085.143652
[2025-10-21 07:07:36] 2025-10-21 11:06:50,327 | INFO     | mean x: 1761033619.3746479
[2025-10-21 07:07:36] 2025-10-21 11:06:50,328 | INFO     | mean y: 2693115.1492957748
[2025-10-21 07:07:36] 2025-10-21 11:06:50,328 | INFO     | -- intersect: -1513211682.2965512
[2025-10-21 07:07:36] 2025-10-21 11:06:50,328 | INFO     | intersect: -1513211682.2965512
[2025-10-21 07:07:36] 2025-10-21 11:06:50,328 | INFO     | chi2: 0.005293742540108658
[2025-10-21 07:07:36] 2025-10-21 11:06:50,329 | INFO     | -- intersect: -1513211682.2965512
[2025-10-21 07:07:36] 2025-10-21 11:06:50,329 | INFO     | current memory leak: 0.86 B/s (using 355 data points, chi2=0.01)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,329 | INFO     | could have reported an average CPU frequency of 2599 MHz (17 samples)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,330 | INFO     | ..............................
[2025-10-21 07:07:36] 2025-10-21 11:06:50,330 | INFO     | . Timing measurements:
[2025-10-21 07:07:36] 2025-10-21 11:06:50,330 | INFO     | . get job = 0 s
[2025-10-21 07:07:36] 2025-10-21 11:06:50,330 | INFO     | . initial setup = 6 s
[2025-10-21 07:07:36] 2025-10-21 11:06:50,330 | INFO     | . payload setup = 67 s
[2025-10-21 07:07:36] 2025-10-21 11:06:50,330 | INFO     | . stage-in = 0 s
[2025-10-21 07:07:36] 2025-10-21 11:06:50,330 | INFO     | . payload execution = 25069 s
[2025-10-21 07:07:36] 2025-10-21 11:06:50,330 | INFO     | . stage-out = 2 s
[2025-10-21 07:07:36] 2025-10-21 11:06:50,331 | INFO     | . log creation = 0 s
[2025-10-21 07:07:36] 2025-10-21 11:06:50,331 | INFO     | ..............................
[2025-10-21 07:07:36] 2025-10-21 11:06:50,442 | INFO     | 
[2025-10-21 07:07:36] 2025-10-21 11:06:50,443 | INFO     | job summary report
[2025-10-21 07:07:36] 2025-10-21 11:06:50,443 | INFO     | --------------------------------------------------
[2025-10-21 07:07:36] 2025-10-21 11:06:50,443 | INFO     | PanDA job id: 6852956784
[2025-10-21 07:07:36] 2025-10-21 11:06:50,443 | INFO     | task id: 46771637
[2025-10-21 07:07:36] 2025-10-21 11:06:50,443 | INFO     | errors: (none)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 07:07:36] 2025-10-21 11:06:50,443 | INFO     | pilot state: finished 
[2025-10-21 07:07:36] 2025-10-21 11:06:50,443 | INFO     | transexitcode: 0
[2025-10-21 07:07:36] 2025-10-21 11:06:50,443 | INFO     | exeerrorcode: 0
[2025-10-21 07:07:36] 2025-10-21 11:06:50,444 | INFO     | exeerrordiag: 
[2025-10-21 07:07:36] 2025-10-21 11:06:50,444 | INFO     | exitcode: 0
[2025-10-21 07:07:36] 2025-10-21 11:06:50,444 | INFO     | exitmsg: OK
[2025-10-21 07:07:36] 2025-10-21 11:06:50,444 | INFO     | cpuconsumptiontime: 57379 s
[2025-10-21 07:07:36] 2025-10-21 11:06:50,444 | INFO     | nevents: 400
[2025-10-21 07:07:36] 2025-10-21 11:06:50,444 | INFO     | neventsw: 0
[2025-10-21 07:07:36] 2025-10-21 11:06:50,444 | INFO     | pid: 494811
[2025-10-21 07:07:36] 2025-10-21 11:06:50,444 | INFO     | pgrp: 494811
[2025-10-21 07:07:36] 2025-10-21 11:06:50,444 | INFO     | corecount: 12
[2025-10-21 07:07:36] 2025-10-21 11:06:50,445 | INFO     | event service: False
[2025-10-21 07:07:36] 2025-10-21 11:06:50,445 | INFO     | sizes: {0: 2348103, 1: 2348788, 2: 2348987, 3: 2348987, 4: 2349015, 15: 2349043, 27: 2349199, 38: 2349227, 49: 2349255, 53: 2349545, 61: 2349573, 25140: 2385906, 2
[2025-10-21 07:07:36] 2025-10-21 11:06:50,445 | INFO     | --------------------------------------------------
[2025-10-21 07:07:36] 2025-10-21 11:06:50,445 | INFO     | 
[2025-10-21 07:07:36] 2025-10-21 11:06:50,445 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-21 07:07:36] 2025-10-21 11:06:50,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,468 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,468 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 07:07:36] 2025-10-21 11:06:50,468 | INFO     | job 6852956784 has completed (purged errors)
[2025-10-21 07:07:36] 2025-10-21 11:06:50,468 | INFO     | overall cleanup function is called
[2025-10-21 07:07:36] 2025-10-21 11:06:51,477 | INFO     | --- collectZombieJob: --- 10, [494811]
[2025-10-21 07:07:36] 2025-10-21 11:06:51,477 | INFO     | zombie collector waiting for pid 494811
[2025-10-21 07:07:36] 2025-10-21 11:06:51,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 07:07:36] 2025-10-21 11:06:51,478 | INFO     | collected zombie processes
[2025-10-21 07:07:36] 2025-10-21 11:06:51,478 | INFO     | will attempt to kill all subprocesses of pid=494811
[2025-10-21 07:07:36] 2025-10-21 11:06:51,728 | INFO     | process IDs to be killed: [494811] (in reverse order)
[2025-10-21 07:07:36] 2025-10-21 11:06:51,803 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 07:07:36] 2025-10-21 11:06:51,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 07:07:36] 2025-10-21 11:06:51,812 | INFO     | did not find any defunct processes belonging to 494811
[2025-10-21 07:07:36] 2025-10-21 11:06:51,821 | INFO     | did not find any defunct processes belonging to 494811
[2025-10-21 07:07:36] 2025-10-21 11:06:51,822 | INFO     | ready for new job
[2025-10-21 07:07:36] 2025-10-21 11:06:51,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 07:07:36] 2025-10-21 11:06:51,825 | INFO     | ***************************************
[2025-10-21 07:07:36] 2025-10-21 11:06:51,825 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 07:07:36] 2025-10-21 11:06:51,825 | INFO     | ***************************************
[2025-10-21 07:07:36] 2025-10-21 11:06:51,826 | INFO     | 
[2025-10-21 07:07:36] 2025-10-21 11:06:51,828 | INFO     | architecture information:
[2025-10-21 07:07:36] 2025-10-21 11:06:51,828 | INFO     | executing command: cat /etc/os-release
[2025-10-21 07:07:36] 2025-10-21 11:06:51,846 | INFO     | cat /etc/os-release:
[2025-10-21 07:07:36] NAME="CentOS Linux"
[2025-10-21 07:07:36] VERSION="7 (Core)"
[2025-10-21 07:07:36] ID="centos"
[2025-10-21 07:07:36] ID_LIKE="rhel fedora"
[2025-10-21 07:07:36] VERSION_ID="7"
[2025-10-21 07:07:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 07:07:36] ANSI_COLOR="0;31"
[2025-10-21 07:07:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 07:07:36] HOME_URL="https://www.centos.org/"
[2025-10-21 07:07:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 07:07:36] 
[2025-10-21 07:07:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 07:07:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 07:07:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 07:07:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 07:07:36] 
[2025-10-21 07:07:36] 2025-10-21 11:06:51,847 | INFO     | ***************************************
[2025-10-21 07:07:36] 2025-10-21 11:06:52,349 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-21 07:07:36] 2025-10-21 11:06:52,367 | INFO     | sufficient remaining disk space (53064237056 B)
[2025-10-21 07:07:36] 2025-10-21 11:06:52,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 07:07:36] 2025-10-21 11:06:52,368 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 07:07:36] 2025-10-21 11:06:52,368 | INFO     | update_server=False
[2025-10-21 07:07:36] 2025-10-21 11:06:52,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 07:07:36] 2025-10-21 11:06:52,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 07:07:36] 2025-10-21 11:06:52,767 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-21 07:07:36] 2025-10-21 11:06:52,767 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-21 07:07:36] 2025-10-21 11:06:52,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 07:07:36] 2025-10-21 11:06:52,767 | INFO     | will abort loop
[2025-10-21 07:07:36] 2025-10-21 11:06:53,190 | INFO     | all job control threads have been joined
[2025-10-21 07:07:36] 2025-10-21 11:06:53,270 | INFO     | all data control threads have been joined
[2025-10-21 07:07:36] 2025-10-21 11:06:53,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 07:07:36] 2025-10-21 11:06:53,373 | INFO     | [job] retrieve thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:53,374 | INFO     | [job] queue monitor thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:53,673 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:53,714 | INFO     | all payload control threads have been joined
[2025-10-21 07:07:36] 2025-10-21 11:06:53,772 | INFO     | [job] job monitor thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:53,810 | INFO     | [data] copytool_in thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:53,811 | INFO     | [job] validate thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:54,052 | INFO     | [payload] failed_post thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:54,195 | INFO     | [job] control thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:54,275 | INFO     | [data] control thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:54,461 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:54,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 07:07:36] 2025-10-21 11:06:54,582 | INFO     | [payload] validate_post thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:54,648 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:54,719 | INFO     | [payload] control thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:54,742 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:55,356 | INFO     | [data] copytool_out thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:06:58,559 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 07:07:36] 2025-10-21 11:07:22,320 | INFO     | PID=482064 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 07:07:36] 2025-10-21 11:07:22,320 | INFO     | .. there are 12 such processes running
[2025-10-21 07:07:36] 2025-10-21 11:07:22,320 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 07:07:36] 2025-10-21 11:07:22,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 07:07:36] 2025-10-21 11:07:22,321 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 07:07:36] 2025-10-21 11:07:29,867 | INFO     | [monitor] cgroup control has ended
[2025-10-21 07:07:36] 2025-10-21 11:07:31,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140385069688640)>', '<ExcThread(monitor, started 140384495728384)>']
[2025-10-21 07:07:36] 2025-10-21 11:07:32,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 07:07:36] 2025-10-21 11:07:32,372 | INFO     | [monitor] control thread has ended
[2025-10-21 07:07:36] 2025-10-21 11:07:36,586 | INFO     | all workflow threads have been joined
[2025-10-21 07:07:36] 2025-10-21 11:07:36,586 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 07:07:36] 2025-10-21 11:07:36,586 | INFO     | traces error code: 0
[2025-10-21 07:07:36] 2025-10-21 11:07:36,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 07:07:36] 2025-10-21 11:07:36,730 [wrapper] ==== pilot stdout END ====
[2025-10-21 07:07:36] 2025-10-21 11:07:36,733 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 07:07:36] 2025-10-21 11:07:36,735 [wrapper] pilotpid: 482064
[2025-10-21 07:07:36] 2025-10-21 11:07:36,738 [wrapper] Pilot exit status: 0
[2025-10-21 07:07:36] 2025-10-21 11:07:36,748 [wrapper] pandaids: 6852956784
[2025-10-21 07:07:36] 2025-10-21 11:07:36,796 [wrapper] cleanup supervisor_pilot 1263827 482065
[2025-10-21 07:07:36] 2025-10-21 11:07:36,799 [wrapper] Test setup, not cleaning
[2025-10-21 07:07:36] 2025-10-21 11:07:36,804 [wrapper] apfmon messages muted
[2025-10-21 07:07:36] 2025-10-21 11:07:36,807 [wrapper] ==== wrapper stdout END ====
[2025-10-21 07:07:36] 2025-10-21 11:07:36,811 [wrapper] ==== wrapper stderr END ====
[2025-10-21 07:07:36]  *** Error codes and diagnostics ***
[2025-10-21 07:07:36]     "exeErrorCode": 0,
[2025-10-21 07:07:36]     "exeErrorDiag": "",
[2025-10-21 07:07:36]     "pilotErrorCode": 0,
[2025-10-21 07:07:36]     "pilotErrorDiag": "",
[2025-10-21 07:07:36]  *** Listing of results directory ***
[2025-10-21 07:07:36] total 435520
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 19:48 pilot3.tar.gz
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 20:43 queuedata.json
[2025-10-21 07:07:36] -rwx------. 1 boincer umatlas     36292 Oct 20 20:46 runpilot2-wrapper.sh
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas       100 Oct 21 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 07:07:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 00:04 run_atlas
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas       105 Oct 21 00:04 job.xml
[2025-10-21 07:07:36] -rw-r--r--. 2 boincer umatlas 229234030 Oct 21 00:04 EVNT.46771634._002267.pool.root.1
[2025-10-21 07:07:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:04 start_atlas.sh
[2025-10-21 07:07:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 21 00:04 shared
[2025-10-21 07:07:36] -rw-r--r--. 2 boincer umatlas    569680 Oct 21 00:04 input.tar.gz
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas         0 Oct 21 00:04 boinc_lockfile
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas      2560 Oct 21 00:04 pandaJob.out
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas    978830 Oct 21 00:05 agis_schedconf.cvmfs.json
[2025-10-21 07:07:36] drwx------. 5 boincer umatlas      4096 Oct 21 00:05 pilot3
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas      6660 Oct 21 07:04 init_data.xml
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas 204823237 Oct 21 07:05 HITS.46771637._057774.pool.root.1
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas       531 Oct 21 07:06 boinc_task_state.xml
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas        95 Oct 21 07:06 pilot_heartbeat.json
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas      1042 Oct 21 07:06 memory_monitor_summary.json
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas   1560740 Oct 21 07:06 agis_ddmendpoints.agis.ALL.json
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas    680992 Oct 21 07:06 log.46771637._057774.job.log.tgz.1
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas      7822 Oct 21 07:06 heartbeat.json
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 07:07 boinc_mmap_file
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas        28 Oct 21 07:07 wrapper_checkpoint.txt
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas      5009 Oct 21 07:07 pilotlog.txt
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas   3324117 Oct 21 07:07 log.46771637._057774.job.log.1
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas       357 Oct 21 07:07 output.list
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas       620 Oct 21 07:07 runtime_log
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas   4024320 Oct 21 07:07 result.tar.gz
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas      8701 Oct 21 07:07 runtime_log.err
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas       656 Oct 21 07:07 O6QNDmAhFV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRX0NDm8RR0Zm.diag
[2025-10-21 07:07:36] -rw-r--r--. 1 boincer umatlas     21116 Oct 21 07:07 stderr.txt
[2025-10-21 07:07:36] HITS file was successfully produced:
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas 204823237 Oct 21 07:05 shared/HITS.pool.root.1
[2025-10-21 07:07:36]  *** Contents of shared directory: ***
[2025-10-21 07:07:36] total 428400
[2025-10-21 07:07:36] -rw-r--r--. 2 boincer umatlas 229234030 Oct 21 00:04 ATLAS.root_0
[2025-10-21 07:07:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:04 start_atlas.sh
[2025-10-21 07:07:36] -rw-r--r--. 2 boincer umatlas    569680 Oct 21 00:04 input.tar.gz
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas 204823237 Oct 21 07:05 HITS.pool.root.1
[2025-10-21 07:07:36] -rw-------. 1 boincer umatlas   4024320 Oct 21 07:07 result.tar.gz
07:07:38 (477488): run_atlas exited; CPU time 58127.558626
07:07:38 (477488): called boinc_finish(0)

</stderr_txt>
]]>

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