Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
08:11:03 (2848852): wrapper (7.7.26015): starting
08:11:03 (2848852): wrapper: running run_atlas (--nthreads 12)
[2025-10-21 08:11:03] Arguments: --nthreads 12
[2025-10-21 08:11:03] Threads: 12
[2025-10-21 08:11:03] Checking for CVMFS
[2025-10-21 08:11:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 08:11:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 08:11:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 08:11:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 08:11:05] 2.11.0.0 2784262 3 43688 151950 0 188 3392618 6144000 2707 130560 0 147251 100.000 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-21 08:11:05] CVMFS is ok
[2025-10-21 08:11:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 08:11:05] Checking for apptainer binary...
[2025-10-21 08:11:05] apptainer is not installed, using version from CVMFS
[2025-10-21 08:11:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 08:11:05] radiat0r
[2025-10-21 08:11:05] apptainer works
[2025-10-21 08:11:05] Set ATHENA_PROC_NUMBER=12
[2025-10-21 08:11:05] Set ATHENA_CORE_NUMBER=12
[2025-10-21 08:11:05] Starting ATLAS job with PandaID=6852949261
[2025-10-21 08:11:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 08:56:27]  *** The last 200 lines of the pilot log: ***
[2025-10-21 08:56:27] 2025-10-21 08:55:37,803 | WARNING  | maxPSS not found in memory monitor output
[2025-10-21 08:56:27] 2025-10-21 08:55:37,803 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3844654 B
[2025-10-21 08:56:27] 2025-10-21 08:55:37,803 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16747 B
[2025-10-21 08:56:27] 2025-10-21 08:55:37,803 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2025-10-21 08:56:27] 2025-10-21 08:55:37,825 | INFO     | sufficient remaining disk space (1717956509696 B)
[2025-10-21 08:56:27] 2025-10-21 08:55:37,826 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-21 08:56:27] 2025-10-21 08:55:37,827 | INFO     | size of work directory /var/lib/boinc/slots/26/PanDA_Pilot-6852949261: 4130136 B (within 2537553920 B limit)
[2025-10-21 08:56:27] 2025-10-21 08:55:37,827 | INFO     | pfn file=/var/lib/boinc/slots/26/PanDA_Pilot-6852949261/HITS.46771637._055112.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-21 08:56:27] 2025-10-21 08:55:37,827 | INFO     | total size of present files: 0 B (workdir size: 4130136 B)
[2025-10-21 08:56:27] 2025-10-21 08:55:37,827 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/26/PanDA_Pilot-6852949261/HITS.46771637._055112.pool.root.1 since it does not exist
[2025-10-21 08:56:27] 2025-10-21 08:55:38,696 | INFO     | number of running child processes to parent process 2866599: 1
[2025-10-21 08:56:27] 2025-10-21 08:55:38,696 | INFO     | maximum number of monitored processes: 6
[2025-10-21 08:56:27] 2025-10-21 08:55:39,105 | INFO     | PID=2853658 has CPU usage=18.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-21 08:56:27] 2025-10-21 08:55:39,106 | INFO     | .. there are 12 such processes running
[2025-10-21 08:56:27] 2025-10-21 08:55:40,106 | INFO     | time since job start (2663s) is within the limit (172800.0s)
[2025-10-21 08:56:27] 2025-10-21 08:55:40,295 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-21 08:56:27] 2025-10-21 08:55:41,199 | INFO     | monitor loop #189: job 0:6852949261 is in state 'finished'
[2025-10-21 08:56:27] 2025-10-21 08:55:41,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 08:56:27] 2025-10-21 08:55:42,110 | INFO     | time since job start (2665s) is within the limit (172800.0s)
[2025-10-21 08:56:27] 2025-10-21 08:55:42,832 | INFO     | job 6852949261 has state=finished
[2025-10-21 08:56:27] 2025-10-21 08:55:42,832 | INFO     | preparing for final server update for job 6852949261 in state='finished'
[2025-10-21 08:56:27] 2025-10-21 08:55:42,833 | INFO     | this job has now completed (state=finished)
[2025-10-21 08:56:27] 2025-10-21 08:55:42,833 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-21 08:56:27] 2025-10-21 08:55:42,833 | INFO     | log transfer has been attempted: DONE
[2025-10-21 08:56:27] 2025-10-21 08:55:42,833 | INFO     | job 6852949261 has finished - writing final server update
[2025-10-21 08:56:27] 2025-10-21 08:55:42,834 | INFO     | total number of processed events: 400 (read)
[2025-10-21 08:56:27] 2025-10-21 08:55:42,834 | INFO     | executing command: lscpu
[2025-10-21 08:56:27] 2025-10-21 08:55:42,951 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-21 08:56:27] 2025-10-21 08:55:43,702 | INFO     | monitor loop #190: job 0:6852949261 is in state 'finished'
[2025-10-21 08:56:27] 2025-10-21 08:55:43,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 08:56:27] 2025-10-21 08:55:44,115 | INFO     | time since job start (2667s) is within the limit (172800.0s)
[2025-10-21 08:56:27] 2025-10-21 08:55:46,120 | INFO     | time since job start (2669s) is within the limit (172800.0s)
[2025-10-21 08:56:27] 2025-10-21 08:55:46,206 | INFO     | monitor loop #191: job 0:6852949261 is in state 'finished'
[2025-10-21 08:56:27] 2025-10-21 08:55:46,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 08:56:27] 2025-10-21 08:55:47,639 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-21 08:56:27] 2025-10-21 08:55:47,685 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2251.2887773437506
[2025-10-21 08:56:27] 2025-10-21 08:55:47,748 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-6852949261/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 08:56:27] 2025-10-21 08:55:47,749 | INFO     | extracted standard info from prmon json
[2025-10-21 08:56:27] 2025-10-21 08:55:47,749 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 08:56:27] 2025-10-21 08:55:47,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 08:56:27] 2025-10-21 08:55:47,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 08:56:27] 2025-10-21 08:55:47,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 08:56:27] 2025-10-21 08:55:47,751 | INFO     | fitting pss+swap vs Time
[2025-10-21 08:56:27] 2025-10-21 08:55:47,751 | INFO     | sum of square deviations: 15695178.0
[2025-10-21 08:56:27] 2025-10-21 08:55:47,752 | INFO     | sum of deviations: 194745001.0
[2025-10-21 08:56:27] 2025-10-21 08:55:47,752 | INFO     | mean x: 1761035709.0
[2025-10-21 08:56:27] 2025-10-21 08:55:47,752 | INFO     | mean y: 2665265.2702702703
[2025-10-21 08:56:27] 2025-10-21 08:55:47,752 | INFO     | -- intersect: -21848179682.792168
[2025-10-21 08:56:27] 2025-10-21 08:55:47,752 | INFO     | intersect: -21848179682.792168
[2025-10-21 08:56:27] 2025-10-21 08:55:47,752 | INFO     | chi2: 0.00019371453795502498
[2025-10-21 08:56:27] 2025-10-21 08:55:47,752 | INFO     | -- intersect: -21848179682.792168
[2025-10-21 08:56:27] 2025-10-21 08:55:47,752 | INFO     | current memory leak: 12.41 B/s (using 37 data points, chi2=0.00)
[2025-10-21 08:56:27] 2025-10-21 08:55:47,753 | INFO     | could have reported an average CPU frequency of 2052 MHz (5 samples)
[2025-10-21 08:56:27] 2025-10-21 08:55:47,753 | INFO     | ..............................
[2025-10-21 08:56:27] 2025-10-21 08:55:47,753 | INFO     | . Timing measurements:
[2025-10-21 08:56:27] 2025-10-21 08:55:47,753 | INFO     | . get job = 0 s
[2025-10-21 08:56:27] 2025-10-21 08:55:47,753 | INFO     | . initial setup = 1 s
[2025-10-21 08:56:27] 2025-10-21 08:55:47,753 | INFO     | . payload setup = 6 s
[2025-10-21 08:56:27] 2025-10-21 08:55:47,753 | INFO     | . stage-in = 0 s
[2025-10-21 08:56:27] 2025-10-21 08:55:47,753 | INFO     | . payload execution = 2632 s
[2025-10-21 08:56:27] 2025-10-21 08:55:47,753 | INFO     | . stage-out = 0 s
[2025-10-21 08:56:27] 2025-10-21 08:55:47,753 | INFO     | . log creation = 0 s
[2025-10-21 08:56:27] 2025-10-21 08:55:47,754 | INFO     | ..............................
[2025-10-21 08:56:27] 2025-10-21 08:55:47,821 | INFO     | 
[2025-10-21 08:56:27] 2025-10-21 08:55:47,821 | INFO     | job summary report
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | --------------------------------------------------
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | PanDA job id: 6852949261
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | task id: 46771637
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | errors: (none)
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | pilot state: finished 
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | transexitcode: 0
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | exeerrorcode: 0
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | exeerrordiag: 
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | exitcode: 0
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | exitmsg: OK
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | cpuconsumptiontime: 28266 s
[2025-10-21 08:56:27] 2025-10-21 08:55:47,822 | INFO     | nevents: 400
[2025-10-21 08:56:27] 2025-10-21 08:55:47,823 | INFO     | neventsw: 0
[2025-10-21 08:56:27] 2025-10-21 08:55:47,823 | INFO     | pid: 2866599
[2025-10-21 08:56:27] 2025-10-21 08:55:47,823 | INFO     | pgrp: 2866599
[2025-10-21 08:56:27] 2025-10-21 08:55:47,823 | INFO     | corecount: 12
[2025-10-21 08:56:27] 2025-10-21 08:55:47,823 | INFO     | event service: False
[2025-10-21 08:56:27] 2025-10-21 08:55:47,823 | INFO     | sizes: {0: 2348931, 6: 2349193, 11: 2349221, 2642: 2374589, 2643: 2374588, 2644: 2383644, 2647: 2383856, 2654: 2384082}
[2025-10-21 08:56:27] 2025-10-21 08:55:47,823 | INFO     | --------------------------------------------------
[2025-10-21 08:56:27] 2025-10-21 08:55:47,823 | INFO     | 
[2025-10-21 08:56:27] 2025-10-21 08:55:47,823 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2025-10-21 08:56:27] 2025-10-21 08:55:47,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 08:56:27] 2025-10-21 08:55:47,847 | INFO     | job 6852949261 has completed (purged errors)
[2025-10-21 08:56:27] 2025-10-21 08:55:47,847 | INFO     | overall cleanup function is called
[2025-10-21 08:56:27] 2025-10-21 08:55:48,850 | INFO     | --- collectZombieJob: --- 10, [2866599]
[2025-10-21 08:56:27] 2025-10-21 08:55:48,850 | INFO     | zombie collector waiting for pid 2866599
[2025-10-21 08:56:27] 2025-10-21 08:55:48,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 08:56:27] 2025-10-21 08:55:48,851 | INFO     | collected zombie processes
[2025-10-21 08:56:27] 2025-10-21 08:55:48,851 | INFO     | will attempt to kill all subprocesses of pid=2866599
[2025-10-21 08:56:27] 2025-10-21 08:55:49,347 | INFO     | process IDs to be killed: [2866599] (in reverse order)
[2025-10-21 08:56:27] 2025-10-21 08:55:49,530 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 08:56:27] 2025-10-21 08:55:49,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 08:56:27] 2025-10-21 08:55:49,550 | INFO     | did not find any defunct processes belonging to 2866599
[2025-10-21 08:56:27] 2025-10-21 08:55:49,565 | INFO     | did not find any defunct processes belonging to 2866599
[2025-10-21 08:56:27] 2025-10-21 08:55:49,565 | INFO     | ready for new job
[2025-10-21 08:56:27] 2025-10-21 08:55:49,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 08:56:27] 2025-10-21 08:55:49,567 | INFO     | ***************************************
[2025-10-21 08:56:27] 2025-10-21 08:55:49,567 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 08:56:27] 2025-10-21 08:55:49,567 | INFO     | ***************************************
[2025-10-21 08:56:27] 2025-10-21 08:55:49,567 | INFO     | 
[2025-10-21 08:56:27] 2025-10-21 08:55:49,602 | INFO     | architecture information:
[2025-10-21 08:56:27] 2025-10-21 08:55:49,602 | INFO     | executing command: cat /etc/os-release
[2025-10-21 08:56:27] 2025-10-21 08:55:49,620 | INFO     | cat /etc/os-release:
[2025-10-21 08:56:27] NAME="CentOS Linux"
[2025-10-21 08:56:27] VERSION="7 (Core)"
[2025-10-21 08:56:27] ID="centos"
[2025-10-21 08:56:27] ID_LIKE="rhel fedora"
[2025-10-21 08:56:27] VERSION_ID="7"
[2025-10-21 08:56:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 08:56:27] ANSI_COLOR="0;31"
[2025-10-21 08:56:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 08:56:27] HOME_URL="https://www.centos.org/"
[2025-10-21 08:56:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 08:56:27] 
[2025-10-21 08:56:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 08:56:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 08:56:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 08:56:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 08:56:27] 
[2025-10-21 08:56:27] 2025-10-21 08:55:49,620 | INFO     | ***************************************
[2025-10-21 08:56:27] 2025-10-21 08:55:50,124 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2025-10-21 08:56:27] 2025-10-21 08:55:50,144 | INFO     | sufficient remaining disk space (1717919809536 B)
[2025-10-21 08:56:27] 2025-10-21 08:55:50,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 08:56:27] 2025-10-21 08:55:50,145 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 08:56:27] 2025-10-21 08:55:50,145 | INFO     | update_server=False
[2025-10-21 08:56:27] 2025-10-21 08:55:50,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 08:56:27] 2025-10-21 08:55:50,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 08:56:27] 2025-10-21 08:55:50,146 | INFO     | aborting loop
[2025-10-21 08:56:27] 2025-10-21 08:55:50,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 08:56:27] 2025-10-21 08:55:50,618 | INFO     | all data control threads have been joined
[2025-10-21 08:56:27] 2025-10-21 08:55:50,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 08:56:27] 2025-10-21 08:55:51,075 | INFO     | all payload control threads have been joined
[2025-10-21 08:56:27] 2025-10-21 08:55:51,150 | INFO     | [job] retrieve thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:51,151 | INFO     | [job] job monitor thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:51,475 | INFO     | [job] validate thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:51,604 | INFO     | [payload] failed_post thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:51,622 | INFO     | [data] control thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:51,629 | INFO     | [data] copytool_in thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:51,728 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:51,838 | INFO     | all job control threads have been joined
[2025-10-21 08:56:27] 2025-10-21 08:55:51,942 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:52,080 | INFO     | [payload] control thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:52,122 | INFO     | [payload] validate_post thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:52,138 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:52,565 | INFO     | [data] copytool_out thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:52,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 08:56:27] 2025-10-21 08:55:52,842 | INFO     | [job] control thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:53,836 | INFO     | [job] queue monitor thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:55:54,895 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:56:00,954 | INFO     | job.realtimelogging is not enabled
[2025-10-21 08:56:27] 2025-10-21 08:56:01,960 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 08:56:27] 2025-10-21 08:56:14,880 [wrapper] supervise_pilot (15 min periods counter: 4)
[2025-10-21 08:56:27] 2025-10-21 08:56:19,990 | INFO     | PID=2853658 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 08:56:27] 2025-10-21 08:56:19,990 | INFO     | .. there are 12 such processes running
[2025-10-21 08:56:27] 2025-10-21 08:56:19,991 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 08:56:27] 2025-10-21 08:56:19,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 08:56:27] 2025-10-21 08:56:19,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 08:56:27] 2025-10-21 08:56:20,634 | INFO     | [monitor] cgroup control has ended
[2025-10-21 08:56:27] 2025-10-21 08:56:22,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656496502592)>', '<ExcThread(monitor, started 139656188372736)>']
[2025-10-21 08:56:27] 2025-10-21 08:56:23,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 08:56:27] 2025-10-21 08:56:23,004 | INFO     | [monitor] control thread has ended
[2025-10-21 08:56:27] 2025-10-21 08:56:27,456 | INFO     | all workflow threads have been joined
[2025-10-21 08:56:27] 2025-10-21 08:56:27,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 08:56:27] 2025-10-21 08:56:27,457 | INFO     | traces error code: 0
[2025-10-21 08:56:27] 2025-10-21 08:56:27,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 08:56:27] 2025-10-21 08:56:27,610 [wrapper] ==== pilot stdout END ====
[2025-10-21 08:56:27] 2025-10-21 08:56:27,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 08:56:27] 2025-10-21 08:56:27,619 [wrapper] pilotpid: 2853658
[2025-10-21 08:56:27] 2025-10-21 08:56:27,622 [wrapper] Pilot exit status: 0
[2025-10-21 08:56:27] 2025-10-21 08:56:27,636 [wrapper] pandaids: 6852949261
[2025-10-21 08:56:27] 2025-10-21 08:56:27,762 [wrapper] cleanup supervisor_pilot 3157550 2853659
[2025-10-21 08:56:27] 2025-10-21 08:56:27,765 [wrapper] Test setup, not cleaning
[2025-10-21 08:56:27] 2025-10-21 08:56:27,768 [wrapper] apfmon messages muted
[2025-10-21 08:56:27] 2025-10-21 08:56:27,771 [wrapper] ==== wrapper stdout END ====
[2025-10-21 08:56:27] 2025-10-21 08:56:27,774 [wrapper] ==== wrapper stderr END ====
[2025-10-21 08:56:27]  *** Error codes and diagnostics ***
[2025-10-21 08:56:27]     "exeErrorCode": 0,
[2025-10-21 08:56:27]     "exeErrorDiag": "",
[2025-10-21 08:56:27]     "pilotErrorCode": 0,
[2025-10-21 08:56:27]     "pilotErrorDiag": "",
[2025-10-21 08:56:27]  *** Listing of results directory ***
[2025-10-21 08:56:27] total 433492
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc    557409 Oct 20 22:52 pilot3.tar.gz
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc      5112 Oct 20 23:12 queuedata.json
[2025-10-21 08:56:27] -rwx------ 1 boinc boinc     36292 Oct 20 23:19 runpilot2-wrapper.sh
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc       100 Oct 21 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 08:56:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 08:11 run_atlas
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc       105 Oct 21 08:11 job.xml
[2025-10-21 08:56:27] -rw-r--r-- 2 boinc boinc 229495699 Oct 21 08:11 EVNT.46771634._002160.pool.root.1
[2025-10-21 08:56:27] -rw-r--r-- 2 boinc boinc     15120 Oct 21 08:11 start_atlas.sh
[2025-10-21 08:56:27] drwxrwx--x 2 boinc boinc      4096 Oct 21 08:11 shared
[2025-10-21 08:56:27] -rw-r--r-- 2 boinc boinc    569682 Oct 21 08:11 input.tar.gz
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc      9398 Oct 21 08:11 init_data.xml
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc         0 Oct 21 08:11 boinc_setup_complete
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc         0 Oct 21 08:11 boinc_lockfile
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc      2559 Oct 21 08:11 pandaJob.out
[2025-10-21 08:56:27] -rw------- 1 boinc boinc    978830 Oct 21 08:11 agis_schedconf.cvmfs.json
[2025-10-21 08:56:27] -rw------- 1 boinc boinc   1560740 Oct 21 08:11 agis_ddmendpoints.agis.ALL.json
[2025-10-21 08:56:27] drwx------ 5 boinc boinc      4096 Oct 21 08:11 pilot3
[2025-10-21 08:56:27] -rw------- 1 boinc boinc 208971680 Oct 21 08:55 HITS.46771637._055112.pool.root.1
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc       529 Oct 21 08:55 boinc_task_state.xml
[2025-10-21 08:56:27] -rw------- 1 boinc boinc      1025 Oct 21 08:55 memory_monitor_summary.json
[2025-10-21 08:56:27] -rw------- 1 boinc boinc    348368 Oct 21 08:55 log.46771637._055112.job.log.tgz.1
[2025-10-21 08:56:27] -rw------- 1 boinc boinc      7744 Oct 21 08:55 heartbeat.json
[2025-10-21 08:56:27] -rw------- 1 boinc boinc        95 Oct 21 08:56 pilot_heartbeat.json
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc      8192 Oct 21 08:56 boinc_mmap_file
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc        27 Oct 21 08:56 wrapper_checkpoint.txt
[2025-10-21 08:56:27] -rw------- 1 boinc boinc      4899 Oct 21 08:56 pilotlog.txt
[2025-10-21 08:56:27] -rw------- 1 boinc boinc    407273 Oct 21 08:56 log.46771637._055112.job.log.1
[2025-10-21 08:56:27] -rw------- 1 boinc boinc       357 Oct 21 08:56 output.list
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc       620 Oct 21 08:56 runtime_log
[2025-10-21 08:56:27] -rw------- 1 boinc boinc    778240 Oct 21 08:56 result.tar.gz
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc      8672 Oct 21 08:56 runtime_log.err
[2025-10-21 08:56:27] -rw------- 1 boinc boinc       643 Oct 21 08:56 o2jKDmMLEV8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmY5zNDmDC1oUm.diag
[2025-10-21 08:56:27] -rw-r--r-- 1 boinc boinc     22086 Oct 21 08:56 stderr.txt
[2025-10-21 08:56:27] HITS file was successfully produced:
[2025-10-21 08:56:27] -rw------- 1 boinc boinc 208971680 Oct 21 08:55 shared/HITS.pool.root.1
[2025-10-21 08:56:27]  *** Contents of shared directory: ***
[2025-10-21 08:56:27] total 429540
[2025-10-21 08:56:27] -rw-r--r-- 2 boinc boinc 229495699 Oct 21 08:11 ATLAS.root_0
[2025-10-21 08:56:27] -rw-r--r-- 2 boinc boinc     15120 Oct 21 08:11 start_atlas.sh
[2025-10-21 08:56:27] -rw-r--r-- 2 boinc boinc    569682 Oct 21 08:11 input.tar.gz
[2025-10-21 08:56:27] -rw------- 1 boinc boinc 208971680 Oct 21 08:55 HITS.pool.root.1
[2025-10-21 08:56:27] -rw------- 1 boinc boinc    778240 Oct 21 08:56 result.tar.gz
08:56:29 (2848852): run_atlas exited; CPU time 28405.194132
08:56:29 (2848852): called boinc_finish(0)

</stderr_txt>
]]>

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