Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:11 (2334675): wrapper (7.7.26015): starting
00:02:11 (2334675): wrapper: running run_atlas (--nthreads 9)
[2025-10-21 00:02:11] Arguments: --nthreads 9
[2025-10-21 00:02:11] Threads: 9
[2025-10-21 00:02:11] Checking for CVMFS
[2025-10-21 00:02:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 00:02:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 00:02:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 00:02:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 00:02:14] 2.13.2.0 1448902 141714 768284 151945 3 638 11468947 21551104 23753 16776704 0 109660742 99.472 145799312 28670 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-21 00:02:14] CVMFS is ok
[2025-10-21 00:02:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 00:02:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 00:02:14] Further information can be found at the LHC@home message board.
[2025-10-21 00:02:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 00:02:14] Checking for apptainer binary...
[2025-10-21 00:02:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 00:02:14] Running /usr/bin/apptainer --version
[2025-10-21 00:02:15] apptainer version 1.4.3-1.el9
[2025-10-21 00:02:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 00:02:16] c-16-30.aglt2.org
[2025-10-21 00:02:16] apptainer works
[2025-10-21 00:02:16] Set ATHENA_PROC_NUMBER=9
[2025-10-21 00:02:16] Set ATHENA_CORE_NUMBER=9
[2025-10-21 00:02:16] Starting ATLAS job with PandaID=6852956052
[2025-10-21 00:02:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 15:04:21]  *** The last 200 lines of the pilot log: ***
[2025-10-21 15:04:21] 2025-10-21 19:03:33,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 15:04:21] 2025-10-21 19:03:33,496 | INFO     | time since job start (54014s) is within the limit (172800.0s)
[2025-10-21 15:04:21] 2025-10-21 19:03:34,090 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-21 15:04:21] 2025-10-21 19:03:34,101 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9949749999987
[2025-10-21 15:04:21] 2025-10-21 19:03:34,110 | INFO     | using path: /var/lib/condor/boinchome/slots/2/PanDA_Pilot-6852956052/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 15:04:21] 2025-10-21 19:03:34,112 | INFO     | extracted standard info from prmon json
[2025-10-21 15:04:21] 2025-10-21 19:03:34,112 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 15:04:21] 2025-10-21 19:03:34,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 15:04:21] 2025-10-21 19:03:34,125 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 15:04:21] 2025-10-21 19:03:34,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 15:04:21] 2025-10-21 19:03:34,162 | INFO     | fitting pss+swap vs Time
[2025-10-21 15:04:21] 2025-10-21 19:03:34,174 | INFO     | sum of square deviations: 213458755412.47083
[2025-10-21 15:04:21] 2025-10-21 19:03:34,212 | INFO     | sum of deviations: 920094785055.2169
[2025-10-21 15:04:21] 2025-10-21 19:03:34,213 | INFO     | mean x: 1761046447.403171
[2025-10-21 15:04:21] 2025-10-21 19:03:34,213 | INFO     | mean y: 2054806.1370328425
[2025-10-21 15:04:21] 2025-10-21 19:03:34,213 | INFO     | -- intersect: -7588777668.102205
[2025-10-21 15:04:21] 2025-10-21 19:03:34,213 | INFO     | intersect: -7588777668.102205
[2025-10-21 15:04:21] 2025-10-21 19:03:34,214 | INFO     | chi2: 5.3854698748884156
[2025-10-21 15:04:21] 2025-10-21 19:03:34,216 | INFO     | sum of square deviations: 209853049033.8937
[2025-10-21 15:04:21] 2025-10-21 19:03:34,238 | INFO     | sum of deviations: 966008676987.2811
[2025-10-21 15:04:21] 2025-10-21 19:03:34,238 | INFO     | mean x: 1761046294.9100227
[2025-10-21 15:04:21] 2025-10-21 19:03:34,238 | INFO     | mean y: 2056737.9908883828
[2025-10-21 15:04:21] 2025-10-21 19:03:34,238 | INFO     | -- intersect: -8104501681.299093
[2025-10-21 15:04:21] 2025-10-21 19:03:34,239 | INFO     | intersect: -8104501681.299093
[2025-10-21 15:04:21] 2025-10-21 19:03:34,240 | INFO     | chi2: 4.629204827266351
[2025-10-21 15:04:21] 2025-10-21 19:03:34,240 | INFO     | current chi2=4.629204827266351 (change=14.042693863137318 %)
[2025-10-21 15:04:21] 2025-10-21 19:03:34,240 | INFO     | right removable region: 877
[2025-10-21 15:04:21] 2025-10-21 19:03:34,242 | INFO     | sum of square deviations: 209852454468.71036
[2025-10-21 15:04:21] 2025-10-21 19:03:34,265 | INFO     | sum of deviations: 723025751791.7738
[2025-10-21 15:04:21] 2025-10-21 19:03:34,266 | INFO     | mean x: 1761046599.9088838
[2025-10-21 15:04:21] 2025-10-21 19:03:34,266 | INFO     | mean y: 2063133.7596810935
[2025-10-21 15:04:21] 2025-10-21 19:03:34,266 | INFO     | -- intersect: -6065447704.095771
[2025-10-21 15:04:21] 2025-10-21 19:03:34,266 | INFO     | intersect: -6065447704.095771
[2025-10-21 15:04:21] 2025-10-21 19:03:34,267 | INFO     | chi2: 2.7304841100897894
[2025-10-21 15:04:21] 2025-10-21 19:03:34,268 | INFO     | current chi2=2.7304841100897894 (change=49.299055170253574 %)
[2025-10-21 15:04:21] 2025-10-21 19:03:34,269 | INFO     | sum of square deviations: 206286991619.8921
[2025-10-21 15:04:21] 2025-10-21 19:03:34,328 | INFO     | sum of deviations: 625187303653.5586
[2025-10-21 15:04:21] 2025-10-21 19:03:34,328 | INFO     | mean x: 1761046752.4146621
[2025-10-21 15:04:21] 2025-10-21 19:03:34,328 | INFO     | mean y: 2067317.0813287515
[2025-10-21 15:04:21] 2025-10-21 19:03:34,328 | INFO     | -- intersect: -5335080033.3375025
[2025-10-21 15:04:21] 2025-10-21 19:03:34,329 | INFO     | intersect: -5335080033.3375025
[2025-10-21 15:04:21] 2025-10-21 19:03:34,330 | INFO     | chi2: 2.177831234166856
[2025-10-21 15:04:21] 2025-10-21 19:03:34,330 | INFO     | current chi2=2.177831234166856 (change=20.240105916776784 %)
[2025-10-21 15:04:21] 2025-10-21 19:03:34,330 | INFO     | left removable region: 20
[2025-10-21 15:04:21] 2025-10-21 19:03:34,332 | INFO     | sum of square deviations: 195150908073.94638
[2025-10-21 15:04:21] 2025-10-21 19:03:34,352 | INFO     | sum of deviations: 555122380835.0641
[2025-10-21 15:04:21] 2025-10-21 19:03:34,352 | INFO     | mean x: 1761046874.4142356
[2025-10-21 15:04:21] 2025-10-21 19:03:34,352 | INFO     | mean y: 2074223.8308051343
[2025-10-21 15:04:21] 2025-10-21 19:03:34,353 | INFO     | -- intersect: -5007364591.163326
[2025-10-21 15:04:21] 2025-10-21 19:03:34,353 | INFO     | intersect: -5007364591.163326
[2025-10-21 15:04:21] 2025-10-21 19:03:34,354 | INFO     | chi2: 1.0591783380675757
[2025-10-21 15:04:21] 2025-10-21 19:03:34,354 | INFO     | -- intersect: -5007364591.163326
[2025-10-21 15:04:21] 2025-10-21 19:03:34,354 | INFO     | current memory leak: 2.84 B/s (using 857 data points, chi2=1.06)
[2025-10-21 15:04:21] 2025-10-21 19:03:34,356 | INFO     | could have reported an average CPU frequency of 2900 MHz (33 samples)
[2025-10-21 15:04:21] 2025-10-21 19:03:34,356 | INFO     | ..............................
[2025-10-21 15:04:21] 2025-10-21 19:03:34,356 | INFO     | . Timing measurements:
[2025-10-21 15:04:21] 2025-10-21 19:03:34,356 | INFO     | . get job = 0 s
[2025-10-21 15:04:21] 2025-10-21 19:03:34,356 | INFO     | . initial setup = 5 s
[2025-10-21 15:04:21] 2025-10-21 19:03:34,357 | INFO     | . payload setup = 37 s
[2025-10-21 15:04:21] 2025-10-21 19:03:34,357 | INFO     | . stage-in = 0 s
[2025-10-21 15:04:21] 2025-10-21 19:03:34,357 | INFO     | . payload execution = 53875 s
[2025-10-21 15:04:21] 2025-10-21 19:03:34,357 | INFO     | . stage-out = 4 s
[2025-10-21 15:04:21] 2025-10-21 19:03:34,357 | INFO     | . log creation = 0 s
[2025-10-21 15:04:21] 2025-10-21 19:03:34,357 | INFO     | ..............................
[2025-10-21 15:04:21] 2025-10-21 19:03:34,654 | INFO     | 
[2025-10-21 15:04:21] 2025-10-21 19:03:34,655 | INFO     | job summary report
[2025-10-21 15:04:21] 2025-10-21 19:03:34,655 | INFO     | --------------------------------------------------
[2025-10-21 15:04:21] 2025-10-21 19:03:34,655 | INFO     | PanDA job id: 6852956052
[2025-10-21 15:04:21] 2025-10-21 19:03:34,655 | INFO     | task id: 46771637
[2025-10-21 15:04:21] 2025-10-21 19:03:34,655 | INFO     | errors: (none)
[2025-10-21 15:04:21] 2025-10-21 19:03:34,656 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 15:04:21] 2025-10-21 19:03:34,656 | INFO     | pilot state: finished 
[2025-10-21 15:04:21] 2025-10-21 19:03:34,656 | INFO     | transexitcode: 0
[2025-10-21 15:04:21] 2025-10-21 19:03:34,656 | INFO     | exeerrorcode: 0
[2025-10-21 15:04:21] 2025-10-21 19:03:34,656 | INFO     | exeerrordiag: 
[2025-10-21 15:04:21] 2025-10-21 19:03:34,656 | INFO     | exitcode: 0
[2025-10-21 15:04:21] 2025-10-21 19:03:34,656 | INFO     | exitmsg: OK
[2025-10-21 15:04:21] 2025-10-21 19:03:34,657 | INFO     | cpuconsumptiontime: 83504 s
[2025-10-21 15:04:21] 2025-10-21 19:03:34,657 | INFO     | nevents: 400
[2025-10-21 15:04:21] 2025-10-21 19:03:34,657 | INFO     | neventsw: 0
[2025-10-21 15:04:21] 2025-10-21 19:03:34,657 | INFO     | pid: 2358324
[2025-10-21 15:04:21] 2025-10-21 19:03:34,657 | INFO     | pgrp: 2358324
[2025-10-21 15:04:21] 2025-10-21 19:03:34,657 | INFO     | corecount: 9
[2025-10-21 15:04:21] 2025-10-21 19:03:34,658 | INFO     | event service: False
[2025-10-21 15:04:21] 2025-10-21 19:03:34,658 | INFO     | sizes: {0: 2348771, 1: 2348771, 2: 2348998, 14: 2348998, 25: 2349026, 37: 2349054, 40: 2349472, 48: 2349500, 53916: 2396634, 53921: 2405654, 53924: 2405710, 53945:
[2025-10-21 15:04:21] 2025-10-21 19:03:34,658 | INFO     | --------------------------------------------------
[2025-10-21 15:04:21] 2025-10-21 19:03:34,662 | INFO     | 
[2025-10-21 15:04:21] 2025-10-21 19:03:34,663 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/2
[2025-10-21 15:04:21] 2025-10-21 19:03:34,938 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,938 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,939 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,939 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,939 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,941 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 15:04:21] 2025-10-21 19:03:34,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 15:04:21] 2025-10-21 19:03:34,942 | INFO     | job 6852956052 has completed (purged errors)
[2025-10-21 15:04:21] 2025-10-21 19:03:34,942 | INFO     | overall cleanup function is called
[2025-10-21 15:04:21] 2025-10-21 19:03:35,950 | INFO     | --- collectZombieJob: --- 10, [2358324]
[2025-10-21 15:04:21] 2025-10-21 19:03:35,950 | INFO     | zombie collector waiting for pid 2358324
[2025-10-21 15:04:21] 2025-10-21 19:03:35,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 15:04:21] 2025-10-21 19:03:35,951 | INFO     | collected zombie processes
[2025-10-21 15:04:21] 2025-10-21 19:03:35,951 | INFO     | will attempt to kill all subprocesses of pid=2358324
[2025-10-21 15:04:21] 2025-10-21 19:03:36,441 | INFO     | process IDs to be killed: [2358324] (in reverse order)
[2025-10-21 15:04:21] 2025-10-21 19:03:36,644 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 15:04:21] 2025-10-21 19:03:36,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 15:04:21] 2025-10-21 19:03:36,660 | INFO     | did not find any defunct processes belonging to 2358324
[2025-10-21 15:04:21] 2025-10-21 19:03:36,675 | INFO     | did not find any defunct processes belonging to 2358324
[2025-10-21 15:04:21] 2025-10-21 19:03:36,676 | INFO     | ready for new job
[2025-10-21 15:04:21] 2025-10-21 19:03:36,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 15:04:21] 2025-10-21 19:03:36,679 | INFO     | ***************************************
[2025-10-21 15:04:21] 2025-10-21 19:03:36,680 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 15:04:21] 2025-10-21 19:03:36,681 | INFO     | ***************************************
[2025-10-21 15:04:21] 2025-10-21 19:03:36,681 | INFO     | 
[2025-10-21 15:04:21] 2025-10-21 19:03:36,695 | INFO     | architecture information:
[2025-10-21 15:04:21] 2025-10-21 19:03:36,696 | INFO     | executing command: cat /etc/os-release
[2025-10-21 15:04:21] 2025-10-21 19:03:36,713 | INFO     | cat /etc/os-release:
[2025-10-21 15:04:21] NAME="CentOS Linux"
[2025-10-21 15:04:21] VERSION="7 (Core)"
[2025-10-21 15:04:21] ID="centos"
[2025-10-21 15:04:21] ID_LIKE="rhel fedora"
[2025-10-21 15:04:21] VERSION_ID="7"
[2025-10-21 15:04:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 15:04:21] ANSI_COLOR="0;31"
[2025-10-21 15:04:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 15:04:21] HOME_URL="https://www.centos.org/"
[2025-10-21 15:04:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 15:04:21] 
[2025-10-21 15:04:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 15:04:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 15:04:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 15:04:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 15:04:21] 
[2025-10-21 15:04:21] 2025-10-21 19:03:36,713 | INFO     | ***************************************
[2025-10-21 15:04:21] 2025-10-21 19:03:37,221 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/2
[2025-10-21 15:04:21] 2025-10-21 19:03:37,264 | INFO     | sufficient remaining disk space (1807386411008 B)
[2025-10-21 15:04:21] 2025-10-21 19:03:37,265 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 15:04:21] 2025-10-21 19:03:37,265 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 15:04:21] 2025-10-21 19:03:37,265 | INFO     | update_server=False
[2025-10-21 15:04:21] 2025-10-21 19:03:37,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 15:04:21] 2025-10-21 19:03:37,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 15:04:21] 2025-10-21 19:03:37,266 | INFO     | aborting loop
[2025-10-21 15:04:21] 2025-10-21 19:03:37,406 | INFO     | all job control threads have been joined
[2025-10-21 15:04:21] 2025-10-21 19:03:37,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 15:04:21] 2025-10-21 19:03:37,553 | INFO     | all payload control threads have been joined
[2025-10-21 15:04:21] 2025-10-21 19:03:37,825 | INFO     | all data control threads have been joined
[2025-10-21 15:04:21] 2025-10-21 19:03:38,271 | INFO     | [job] retrieve thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:38,277 | INFO     | [job] job monitor thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:38,412 | INFO     | [job] control thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:38,441 | INFO     | [job] validate thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:38,569 | INFO     | [payload] control thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:38,725 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 15:04:21] 2025-10-21 19:03:38,831 | INFO     | [data] control thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:38,934 | INFO     | [payload] validate_post thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:39,403 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:39,408 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:39,523 | INFO     | [data] copytool_in thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:39,626 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:39,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 15:04:21] 2025-10-21 19:03:39,713 | INFO     | [payload] failed_post thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:40,701 | INFO     | [job] queue monitor thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:40,734 | INFO     | [data] copytool_out thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:41,573 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:03:48,127 | INFO     | job.realtimelogging is not enabled
[2025-10-21 15:04:21] 2025-10-21 19:03:49,134 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 15:04:21] 2025-10-21 19:04:07,946 | INFO     | PID=2340945 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 15:04:21] 2025-10-21 19:04:07,946 | INFO     | .. there are 20 such processes running
[2025-10-21 15:04:21] 2025-10-21 19:04:07,947 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 15:04:21] 2025-10-21 19:04:07,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 15:04:21] 2025-10-21 19:04:07,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 15:04:21] 2025-10-21 19:04:14,330 | INFO     | [monitor] cgroup control has ended
[2025-10-21 15:04:21] 2025-10-21 19:04:15,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285125236544)>', '<ExcThread(monitor, started 140284478342912)>']
[2025-10-21 15:04:21] 2025-10-21 19:04:15,993 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 15:04:21] 2025-10-21 19:04:15,993 | INFO     | [monitor] control thread has ended
[2025-10-21 15:04:21] 2025-10-21 19:04:20,357 | INFO     | all workflow threads have been joined
[2025-10-21 15:04:21] 2025-10-21 19:04:20,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 15:04:21] 2025-10-21 19:04:20,358 | INFO     | traces error code: 0
[2025-10-21 15:04:21] 2025-10-21 19:04:20,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 15:04:21] 2025-10-21 19:04:20,564 [wrapper] ==== pilot stdout END ====
[2025-10-21 15:04:21] 2025-10-21 19:04:20,568 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 15:04:21] 2025-10-21 19:04:20,570 [wrapper] pilotpid: 2340945
[2025-10-21 15:04:21] 2025-10-21 19:04:20,573 [wrapper] Pilot exit status: 0
[2025-10-21 15:04:21] 2025-10-21 19:04:20,630 [wrapper] pandaids: 6852956052
[2025-10-21 15:04:21] 2025-10-21 19:04:20,717 [wrapper] cleanup supervisor_pilot  313480 2340946
[2025-10-21 15:04:21] 2025-10-21 19:04:20,720 [wrapper] Test setup, not cleaning
[2025-10-21 15:04:21] 2025-10-21 19:04:20,723 [wrapper] apfmon messages muted
[2025-10-21 15:04:21] 2025-10-21 19:04:20,726 [wrapper] ==== wrapper stdout END ====
[2025-10-21 15:04:21] 2025-10-21 19:04:20,729 [wrapper] ==== wrapper stderr END ====
[2025-10-21 15:04:21]  *** Error codes and diagnostics ***
[2025-10-21 15:04:21]     "exeErrorCode": 0,
[2025-10-21 15:04:21]     "exeErrorDiag": "",
[2025-10-21 15:04:21]     "pilotErrorCode": 0,
[2025-10-21 15:04:21]     "pilotErrorDiag": "",
[2025-10-21 15:04:21]  *** Listing of results directory ***
[2025-10-21 15:04:21] total 434252
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 20 19:48 pilot3.tar.gz
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 20 20:39 queuedata.json
[2025-10-21 15:04:21] -rwx------. 1 boincer umatlas     36292 Oct 20 20:39 runpilot2-wrapper.sh
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas       100 Oct 21 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 15:04:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 21 00:02 run_atlas
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas       105 Oct 21 00:02 job.xml
[2025-10-21 15:04:21] -rw-r--r--. 2 boincer umatlas 226271020 Oct 21 00:02 EVNT.46771634._002252.pool.root.1
[2025-10-21 15:04:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:02 start_atlas.sh
[2025-10-21 15:04:21] drwxrwx--x. 2 boincer umatlas        68 Oct 21 00:02 shared
[2025-10-21 15:04:21] -rw-r--r--. 2 boincer umatlas    569680 Oct 21 00:02 input.tar.gz
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas         0 Oct 21 00:02 boinc_lockfile
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas      2560 Oct 21 00:02 pandaJob.out
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas    978830 Oct 21 00:03 agis_schedconf.cvmfs.json
[2025-10-21 15:04:21] drwx------. 5 boincer umatlas      4096 Oct 21 00:03 pilot3
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas 201559468 Oct 21 15:02 HITS.46771637._057413.pool.root.1
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas       531 Oct 21 15:02 boinc_task_state.xml
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas      1036 Oct 21 15:03 memory_monitor_summary.json
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas   1560740 Oct 21 15:03 agis_ddmendpoints.agis.ALL.json
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas    888182 Oct 21 15:03 log.46771637._057413.job.log.tgz.1
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas        95 Oct 21 15:03 pilot_heartbeat.json
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas      6549 Oct 21 15:03 init_data.xml
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas      7820 Oct 21 15:03 heartbeat.json
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas      4909 Oct 21 15:04 pilotlog.txt
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas        28 Oct 21 15:04 wrapper_checkpoint.txt
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 21 15:04 boinc_mmap_file
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas   5588628 Oct 21 15:04 log.46771637._057413.job.log.1
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas       357 Oct 21 15:04 output.list
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas       620 Oct 21 15:04 runtime_log
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas   6492160 Oct 21 15:04 result.tar.gz
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas      8853 Oct 21 15:04 runtime_log.err
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas       658 Oct 21 15:04 GwxKDmAaFV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRPeMDmMXfEvm.diag
[2025-10-21 15:04:21] -rw-r--r--. 1 boincer umatlas     21278 Oct 21 15:04 stderr.txt
[2025-10-21 15:04:21] HITS file was successfully produced:
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas 201559468 Oct 21 15:02 shared/HITS.pool.root.1
[2025-10-21 15:04:21]  *** Contents of shared directory: ***
[2025-10-21 15:04:21] total 424724
[2025-10-21 15:04:21] -rw-r--r--. 2 boincer umatlas 226271020 Oct 21 00:02 ATLAS.root_0
[2025-10-21 15:04:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 21 00:02 start_atlas.sh
[2025-10-21 15:04:21] -rw-r--r--. 2 boincer umatlas    569680 Oct 21 00:02 input.tar.gz
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas 201559468 Oct 21 15:02 HITS.pool.root.1
[2025-10-21 15:04:21] -rw-------. 1 boincer umatlas   6492160 Oct 21 15:04 result.tar.gz
15:04:23 (2334675): run_atlas exited; CPU time 85517.781806
15:04:23 (2334675): called boinc_finish(0)

</stderr_txt>
]]>

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