Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:48:23 (863806): wrapper (7.7.26015): starting
07:48:23 (863806): wrapper: running run_atlas (--nthreads 3)
[2025-10-21 07:48:23] Arguments: --nthreads 3
[2025-10-21 07:48:23] Threads: 3
[2025-10-21 07:48:23] Checking for CVMFS
[2025-10-21 07:48:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 07:48:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 07:48:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 07:48:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 07:48:23] 2.9.2.0 788955 264 60492 151947 3 57 31059325 36864001 0 130560 0 197195 99.982 10778 1230 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 07:48:23] CVMFS is ok
[2025-10-21 07:48:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 07:48:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 07:48:23] Further information can be found at the LHC@home message board.
[2025-10-21 07:48:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 07:48:23] Checking for apptainer binary...
[2025-10-21 07:48:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 07:48:23] Running /usr/bin/apptainer --version
[2025-10-21 07:48:23] apptainer version 1.4.1-1.1
[2025-10-21 07:48:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 07:48:24] magicA161
[2025-10-21 07:48:24] apptainer works
[2025-10-21 07:48:24] Set ATHENA_PROC_NUMBER=3
[2025-10-21 07:48:24] Set ATHENA_CORE_NUMBER=3
[2025-10-21 07:48:24] Starting ATLAS job with PandaID=6852955078
[2025-10-21 07:48:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 09:17:42]  *** The last 200 lines of the pilot log: ***
[2025-10-21 09:17:42] 2025-10-21 07:16:53,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 09:17:42] 2025-10-21 07:16:53,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 09:17:42] 2025-10-21 07:16:53,594 | INFO     | aborting loop
[2025-10-21 09:17:42] 2025-10-21 07:16:53,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 09:17:42] 2025-10-21 07:16:53,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 09:17:42] 2025-10-21 07:16:54,280 | INFO     | all data control threads have been joined
[2025-10-21 09:17:42] 2025-10-21 07:16:54,572 | INFO     | all payload control threads have been joined
[2025-10-21 09:17:42] 2025-10-21 07:16:54,596 | INFO     | [job] job monitor thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:54,600 | INFO     | [job] retrieve thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:54,600 | INFO     | [job] queue monitor thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:54,693 | INFO     | all job control threads have been joined
[2025-10-21 09:17:42] 2025-10-21 07:16:54,856 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:55,080 | INFO     | [data] copytool_in thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:55,286 | INFO     | [data] control thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:55,367 | INFO     | [payload] failed_post thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:55,428 | INFO     | [job] validate thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:55,443 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:55,508 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:55,578 | INFO     | [payload] control thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:55,600 | INFO     | [data] copytool_out thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:55,699 | INFO     | [job] control thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:55,910 | INFO     | [payload] validate_post thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:16:57,601 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:17:04,267 | INFO     | job.realtimelogging is not enabled
[2025-10-21 09:17:42] 2025-10-21 07:17:05,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 09:17:42] 2025-10-21 07:17:23,763 | INFO     | PID=867524 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-21 09:17:42] 2025-10-21 07:17:23,763 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 09:17:42] 2025-10-21 07:17:23,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 09:17:42] 2025-10-21 07:17:23,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 09:17:42] 2025-10-21 07:17:36,020 | INFO     | [monitor] cgroup control has ended
[2025-10-21 09:17:42] 2025-10-21 07:17:37,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687963076416)>', '<ExcThread(monitor, started 139686991341312)>']
[2025-10-21 09:17:42] 2025-10-21 07:17:37,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 09:17:42] 2025-10-21 07:17:37,839 | INFO     | [monitor] control thread has ended
[2025-10-21 09:17:42] 2025-10-21 07:17:42,393 | INFO     | all workflow threads have been joined
[2025-10-21 09:17:42] 2025-10-21 07:17:42,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 09:17:42] 2025-10-21 07:17:42,394 | INFO     | traces error code: 0
[2025-10-21 09:17:42] 2025-10-21 07:17:42,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 09:17:42] 2025-10-21 07:17:42,444 [wrapper] ==== pilot stdout END ====
[2025-10-21 09:17:42] 2025-10-21 07:17:42,447 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 09:17:42] 2025-10-21 07:17:42,449 [wrapper] pilotpid: 867524
[2025-10-21 09:17:42] 2025-10-21 07:17:42,452 [wrapper] Pilot exit status: 0
[2025-10-21 09:17:42] 2025-10-21 07:17:42,459 [wrapper] pandaids: 6852955078
[2025-10-21 09:17:42] 2025-10-21 07:17:42,477 [wrapper] cleanup supervisor_pilot  885966 867525
[2025-10-21 09:17:42] 2025-10-21 07:17:42,480 [wrapper] Test setup, not cleaning
[2025-10-21 09:17:42] 2025-10-21 07:17:42,482 [wrapper] apfmon messages muted
[2025-10-21 09:17:42] 2025-10-21 07:17:42,485 [wrapper] ==== wrapper stdout END ====
[2025-10-21 09:17:42] 2025-10-21 07:17:42,487 [wrapper] ==== wrapper stderr END ====
[2025-10-21 09:17:42]  *** Error codes and diagnostics ***
[2025-10-21 09:17:42]     "exeErrorCode": 0,
[2025-10-21 09:17:42]     "exeErrorDiag": "",
[2025-10-21 09:17:42]     "pilotErrorCode": 0,
[2025-10-21 09:17:42]     "pilotErrorDiag": "",
[2025-10-21 09:17:42]  *** Listing of results directory ***
[2025-10-21 09:17:42] total 431364
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc    557409 Oct 21 01:48 pilot3.tar.gz
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc      5112 Oct 21 02:19 queuedata.json
[2025-10-21 09:17:42] -rwx------ 1 boinc boinc     36292 Oct 21 02:20 runpilot2-wrapper.sh
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc       100 Oct 21 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 09:17:42] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 07:48 run_atlas
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc       105 Oct 21 07:48 job.xml
[2025-10-21 09:17:42] -rw-r--r-- 2 boinc boinc 227368415 Oct 21 07:48 EVNT.46771634._002229.pool.root.1
[2025-10-21 09:17:42] -rw-r--r-- 2 boinc boinc    569677 Oct 21 07:48 input.tar.gz
[2025-10-21 09:17:42] -rw-r--r-- 2 boinc boinc     15120 Oct 21 07:48 start_atlas.sh
[2025-10-21 09:17:42] drwxrwx--x 2 boinc boinc      4096 Oct 21 07:48 shared
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc         0 Oct 21 07:48 boinc_setup_complete
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc      6449 Oct 21 07:48 init_data.xml
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc         0 Oct 21 07:48 boinc_lockfile
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc      2560 Oct 21 07:48 pandaJob.out
[2025-10-21 09:17:42] -rw------- 1 boinc boinc    978830 Oct 21 07:48 agis_schedconf.cvmfs.json
[2025-10-21 09:17:42] -rw------- 1 boinc boinc   1560740 Oct 21 07:48 agis_ddmendpoints.agis.ALL.json
[2025-10-21 09:17:42] drwx------ 5 boinc boinc      4096 Oct 21 07:48 pilot3
[2025-10-21 09:17:42] -rw------- 1 boinc boinc 208369671 Oct 21 09:16 HITS.46771637._056858.pool.root.1
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc       529 Oct 21 09:16 boinc_task_state.xml
[2025-10-21 09:17:42] -rw------- 1 boinc boinc      1018 Oct 21 09:16 memory_monitor_summary.json
[2025-10-21 09:17:42] -rw------- 1 boinc boinc    270619 Oct 21 09:16 log.46771637._056858.job.log.tgz.1
[2025-10-21 09:17:42] -rw------- 1 boinc boinc      7761 Oct 21 09:16 heartbeat.json
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc      8192 Oct 21 09:17 boinc_mmap_file
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc        27 Oct 21 09:17 wrapper_checkpoint.txt
[2025-10-21 09:17:42] -rw------- 1 boinc boinc        95 Oct 21 09:17 pilot_heartbeat.json
[2025-10-21 09:17:42] -rw------- 1 boinc boinc      4823 Oct 21 09:17 pilotlog.txt
[2025-10-21 09:17:42] -rw------- 1 boinc boinc    773376 Oct 21 09:17 log.46771637._056858.job.log.1
[2025-10-21 09:17:42] -rw------- 1 boinc boinc       357 Oct 21 09:17 output.list
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc       620 Oct 21 09:17 runtime_log
[2025-10-21 09:17:42] -rw------- 1 boinc boinc   1064960 Oct 21 09:17 result.tar.gz
[2025-10-21 09:17:42] -rw------- 1 boinc boinc       661 Oct 21 09:17 yo2KDmRIFV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmLeMDm1JnN1n.diag
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc      8792 Oct 21 09:17 runtime_log.err
[2025-10-21 09:17:42] -rw-r--r-- 1 boinc boinc      7284 Oct 21 09:17 stderr.txt
[2025-10-21 09:17:42] HITS file was successfully produced:
[2025-10-21 09:17:42] -rw------- 1 boinc boinc 208369671 Oct 21 09:16 shared/HITS.pool.root.1
[2025-10-21 09:17:42]  *** Contents of shared directory: ***
[2025-10-21 09:17:42] total 427152
[2025-10-21 09:17:42] -rw-r--r-- 2 boinc boinc 227368415 Oct 21 07:48 ATLAS.root_0
[2025-10-21 09:17:42] -rw-r--r-- 2 boinc boinc    569677 Oct 21 07:48 input.tar.gz
[2025-10-21 09:17:42] -rw-r--r-- 2 boinc boinc     15120 Oct 21 07:48 start_atlas.sh
[2025-10-21 09:17:42] -rw------- 1 boinc boinc 208369671 Oct 21 09:16 HITS.pool.root.1
[2025-10-21 09:17:42] -rw------- 1 boinc boinc   1064960 Oct 21 09:17 result.tar.gz
09:17:43 (863806): run_atlas exited; CPU time 15229.327124
09:17:43 (863806): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN