Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:47:49 (27651): wrapper (7.7.26015): starting
22:47:49 (27651): wrapper: running run_atlas (--nthreads 12)
[2025-10-20 22:47:49] Arguments: --nthreads 12
[2025-10-20 22:47:49] Threads: 12
[2025-10-20 22:47:49] Checking for CVMFS
[2025-10-20 22:47:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 22:47:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 22:47:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 22:47:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 22:47:50] 2.11.2.0 2945 235261 100656 151943 3 59 13458046 20275201 1 130560 2 116741897 99.984 13835312 13052 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-20 22:47:50] CVMFS is ok
[2025-10-20 22:47:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 22:47:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 22:47:50] Further information can be found at the LHC@home message board.
[2025-10-20 22:47:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 22:47:50] Checking for apptainer binary...
[2025-10-20 22:47:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 22:47:50] Running /usr/bin/apptainer --version
[2025-10-20 22:47:50] apptainer version 1.3.2-1.el7
[2025-10-20 22:47:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 22:47:51] c-205-2.aglt2.org
[2025-10-20 22:47:51] apptainer works
[2025-10-20 22:47:51] Set ATHENA_PROC_NUMBER=12
[2025-10-20 22:47:51] Set ATHENA_CORE_NUMBER=12
[2025-10-20 22:47:51] Starting ATLAS job with PandaID=6852946641
[2025-10-20 22:47:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 00:08:20]  *** The last 200 lines of the pilot log: ***
[2025-10-21 00:08:20]  status=None
[2025-10-21 00:08:20]  status_code=0
[2025-10-21 00:08:20]  storage_token=
[2025-10-21 00:08:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6852946641/log.46771637._053368.job.log.tgz.1
[2025-10-21 00:08:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/ff/log.46771637._053368.job.log.tgz.1
[2025-10-21 00:08:20]  workdir=None
[2025-10-21 00:08:20] ]
[2025-10-21 00:08:20] 2025-10-21 04:07:36,838 | INFO     | transferring file log.46771637._053368.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6852946641/log.46771637._053368.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-21 00:08:20] 2025-10-21 04:07:36,838 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6852946641/log.46771637._053368.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._053368.job
[2025-10-21 00:08:20] 2025-10-21 04:07:36,861 | INFO     | adding to output.list: log.46771637._053368.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/ff/log.46771637._053368.job.log.tg
[2025-10-21 00:08:20] 2025-10-21 04:07:36,862 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-21 00:08:20] 2025-10-21 04:07:36,862 | INFO     | summary of transferred files:
[2025-10-21 00:08:20] 2025-10-21 04:07:36,862 | INFO     |  -- lfn=log.46771637._053368.job.log.tgz.1, status_code=0, status=transferred
[2025-10-21 00:08:20] 2025-10-21 04:07:36,863 | INFO     | stage-out finished correctly
[2025-10-21 00:08:20] 2025-10-21 04:07:36,939 | INFO     | time since job start (4769s) is within the limit (172800.0s)
[2025-10-21 00:08:20] 2025-10-21 04:07:36,949 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-21 00:08:20] 2025-10-21 04:07:38,336 | INFO     | job 6852946641 has state=finished
[2025-10-21 00:08:20] 2025-10-21 04:07:38,336 | INFO     | preparing for final server update for job 6852946641 in state='finished'
[2025-10-21 00:08:20] 2025-10-21 04:07:38,341 | INFO     | this job has now completed (state=finished)
[2025-10-21 00:08:20] 2025-10-21 04:07:38,341 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-21 00:08:20] 2025-10-21 04:07:38,341 | INFO     | log transfer has been attempted: DONE
[2025-10-21 00:08:20] 2025-10-21 04:07:38,342 | INFO     | job 6852946641 has finished - writing final server update
[2025-10-21 00:08:20] 2025-10-21 04:07:38,342 | INFO     | total number of processed events: 400 (read)
[2025-10-21 00:08:20] 2025-10-21 04:07:38,343 | INFO     | executing command: lscpu
[2025-10-21 00:08:20] 2025-10-21 04:07:38,365 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-21 00:08:20] 2025-10-21 04:07:38,944 | INFO     | time since job start (4771s) is within the limit (172800.0s)
[2025-10-21 00:08:20] 2025-10-21 04:07:39,928 | WARNING  | process 6382 can no longer be monitored (due to stat problems) - aborting
[2025-10-21 00:08:20] 2025-10-21 04:07:39,928 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6852946641/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 00:08:20] 2025-10-21 04:07:40,105 | INFO     | number of running child processes to parent process 6382: 1
[2025-10-21 00:08:20] 2025-10-21 04:07:40,106 | INFO     | maximum number of monitored processes: 6
[2025-10-21 00:08:20] 2025-10-21 04:07:40,153 | INFO     | PID=31452 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 00:08:20] 2025-10-21 04:07:41,154 | INFO     | time since job start (4774s) is within the limit (172800.0s)
[2025-10-21 00:08:20] 2025-10-21 04:07:42,609 | INFO     | monitor loop #357: job 0:6852946641 is in state 'finished'
[2025-10-21 00:08:20] 2025-10-21 04:07:42,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-21 00:08:20] 2025-10-21 04:07:42,984 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-21 00:08:20] 2025-10-21 04:07:42,987 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-21 00:08:20] 2025-10-21 04:07:42,990 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6852946641/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 00:08:20] 2025-10-21 04:07:42,990 | INFO     | extracted standard info from prmon json
[2025-10-21 00:08:20] 2025-10-21 04:07:42,990 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 00:08:20] 2025-10-21 04:07:42,991 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 00:08:20] 2025-10-21 04:07:42,991 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 00:08:20] 2025-10-21 04:07:42,991 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 00:08:20] 2025-10-21 04:07:42,992 | INFO     | fitting pss+swap vs Time
[2025-10-21 00:08:20] 2025-10-21 04:07:42,993 | INFO     | sum of square deviations: 110960220.0
[2025-10-21 00:08:20] 2025-10-21 04:07:42,993 | INFO     | sum of deviations: -7640627956.000001
[2025-10-21 00:08:20] 2025-10-21 04:07:42,993 | INFO     | mean x: 1761017356.0
[2025-10-21 00:08:20] 2025-10-21 04:07:42,993 | INFO     | mean y: 2761491.056338028
[2025-10-21 00:08:20] 2025-10-21 04:07:42,993 | INFO     | -- intersect: 121264943931.34717
[2025-10-21 00:08:20] 2025-10-21 04:07:42,993 | INFO     | intersect: 121264943931.34717
[2025-10-21 00:08:20] 2025-10-21 04:07:42,994 | INFO     | chi2: 0.06657209364646922
[2025-10-21 00:08:20] 2025-10-21 04:07:42,994 | INFO     | -- intersect: 121264943931.34717
[2025-10-21 00:08:20] 2025-10-21 04:07:42,994 | INFO     | current memory leak: -68.86 B/s (using 71 data points, chi2=0.07)
[2025-10-21 00:08:20] 2025-10-21 04:07:42,994 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-10-21 00:08:20] 2025-10-21 04:07:42,994 | INFO     | ..............................
[2025-10-21 00:08:20] 2025-10-21 04:07:42,994 | INFO     | . Timing measurements:
[2025-10-21 00:08:20] 2025-10-21 04:07:42,995 | INFO     | . get job = 0 s
[2025-10-21 00:08:20] 2025-10-21 04:07:42,995 | INFO     | . initial setup = 2 s
[2025-10-21 00:08:20] 2025-10-21 04:07:42,995 | INFO     | . payload setup = 7 s
[2025-10-21 00:08:20] 2025-10-21 04:07:42,995 | INFO     | . stage-in = 0 s
[2025-10-21 00:08:20] 2025-10-21 04:07:42,995 | INFO     | . payload execution = 4740 s
[2025-10-21 00:08:20] 2025-10-21 04:07:42,995 | INFO     | . stage-out = 0 s
[2025-10-21 00:08:20] 2025-10-21 04:07:42,995 | INFO     | . log creation = 0 s
[2025-10-21 00:08:20] 2025-10-21 04:07:42,995 | INFO     | ..............................
[2025-10-21 00:08:20] 2025-10-21 04:07:43,159 | INFO     | time since job start (4776s) is within the limit (172800.0s)
[2025-10-21 00:08:20] 2025-10-21 04:07:43,234 | INFO     | 
[2025-10-21 00:08:20] 2025-10-21 04:07:43,234 | INFO     | job summary report
[2025-10-21 00:08:20] 2025-10-21 04:07:43,234 | INFO     | --------------------------------------------------
[2025-10-21 00:08:20] 2025-10-21 04:07:43,234 | INFO     | PanDA job id: 6852946641
[2025-10-21 00:08:20] 2025-10-21 04:07:43,234 | INFO     | task id: 46771637
[2025-10-21 00:08:20] 2025-10-21 04:07:43,234 | INFO     | errors: (none)
[2025-10-21 00:08:20] 2025-10-21 04:07:43,235 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 00:08:20] 2025-10-21 04:07:43,235 | INFO     | pilot state: finished 
[2025-10-21 00:08:20] 2025-10-21 04:07:43,235 | INFO     | transexitcode: 0
[2025-10-21 00:08:20] 2025-10-21 04:07:43,235 | INFO     | exeerrorcode: 0
[2025-10-21 00:08:20] 2025-10-21 04:07:43,235 | INFO     | exeerrordiag: 
[2025-10-21 00:08:20] 2025-10-21 04:07:43,235 | INFO     | exitcode: 0
[2025-10-21 00:08:20] 2025-10-21 04:07:43,236 | INFO     | exitmsg: OK
[2025-10-21 00:08:20] 2025-10-21 04:07:43,236 | INFO     | cpuconsumptiontime: 51959 s
[2025-10-21 00:08:20] 2025-10-21 04:07:43,236 | INFO     | nevents: 400
[2025-10-21 00:08:20] 2025-10-21 04:07:43,236 | INFO     | neventsw: 0
[2025-10-21 00:08:20] 2025-10-21 04:07:43,236 | INFO     | pid: 6382
[2025-10-21 00:08:20] 2025-10-21 04:07:43,236 | INFO     | pgrp: 6382
[2025-10-21 00:08:20] 2025-10-21 04:07:43,236 | INFO     | corecount: 12
[2025-10-21 00:08:20] 2025-10-21 04:07:43,237 | INFO     | event service: False
[2025-10-21 00:08:20] 2025-10-21 04:07:43,237 | INFO     | sizes: {0: 2348704, 1: 2348959, 6: 2349221, 12: 2349249, 4752: 2375436, 4754: 2384618, 4760: 2384756}
[2025-10-21 00:08:20] 2025-10-21 04:07:43,237 | INFO     | --------------------------------------------------
[2025-10-21 00:08:20] 2025-10-21 04:07:43,237 | INFO     | 
[2025-10-21 00:08:20] 2025-10-21 04:07:43,237 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 00:08:20] 2025-10-21 04:07:43,260 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,260 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,260 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,260 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,262 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 00:08:20] 2025-10-21 04:07:43,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 00:08:20] 2025-10-21 04:07:43,263 | INFO     | job 6852946641 has completed (purged errors)
[2025-10-21 00:08:20] 2025-10-21 04:07:43,263 | INFO     | overall cleanup function is called
[2025-10-21 00:08:20] 2025-10-21 04:07:44,271 | INFO     | --- collectZombieJob: --- 10, [6382]
[2025-10-21 00:08:20] 2025-10-21 04:07:44,272 | INFO     | zombie collector waiting for pid 6382
[2025-10-21 00:08:20] 2025-10-21 04:07:44,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 00:08:20] 2025-10-21 04:07:44,272 | INFO     | collected zombie processes
[2025-10-21 00:08:20] 2025-10-21 04:07:44,272 | INFO     | will attempt to kill all subprocesses of pid=6382
[2025-10-21 00:08:20] 2025-10-21 04:07:44,365 | INFO     | process IDs to be killed: [6382] (in reverse order)
[2025-10-21 00:08:20] 2025-10-21 04:07:44,415 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 00:08:20] 2025-10-21 04:07:44,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 00:08:20] 2025-10-21 04:07:44,419 | INFO     | did not find any defunct processes belonging to 6382
[2025-10-21 00:08:20] 2025-10-21 04:07:44,422 | INFO     | did not find any defunct processes belonging to 6382
[2025-10-21 00:08:20] 2025-10-21 04:07:44,422 | INFO     | ready for new job
[2025-10-21 00:08:20] 2025-10-21 04:07:44,423 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 00:08:20] 2025-10-21 04:07:44,424 | INFO     | ***************************************
[2025-10-21 00:08:20] 2025-10-21 04:07:44,424 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 00:08:20] 2025-10-21 04:07:44,424 | INFO     | ***************************************
[2025-10-21 00:08:20] 2025-10-21 04:07:44,424 | INFO     | 
[2025-10-21 00:08:20] 2025-10-21 04:07:44,425 | INFO     | architecture information:
[2025-10-21 00:08:20] 2025-10-21 04:07:44,425 | INFO     | executing command: cat /etc/os-release
[2025-10-21 00:08:20] 2025-10-21 04:07:44,440 | INFO     | cat /etc/os-release:
[2025-10-21 00:08:20] NAME="CentOS Linux"
[2025-10-21 00:08:20] VERSION="7 (Core)"
[2025-10-21 00:08:20] ID="centos"
[2025-10-21 00:08:20] ID_LIKE="rhel fedora"
[2025-10-21 00:08:20] VERSION_ID="7"
[2025-10-21 00:08:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 00:08:20] ANSI_COLOR="0;31"
[2025-10-21 00:08:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 00:08:20] HOME_URL="https://www.centos.org/"
[2025-10-21 00:08:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 00:08:20] 
[2025-10-21 00:08:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 00:08:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 00:08:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 00:08:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 00:08:20] 
[2025-10-21 00:08:20] 2025-10-21 04:07:44,440 | INFO     | ***************************************
[2025-10-21 00:08:20] 2025-10-21 04:07:44,941 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 00:08:20] 2025-10-21 04:07:44,957 | INFO     | sufficient remaining disk space (29392633856 B)
[2025-10-21 00:08:20] 2025-10-21 04:07:44,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 00:08:20] 2025-10-21 04:07:44,957 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 00:08:20] 2025-10-21 04:07:44,957 | INFO     | update_server=False
[2025-10-21 00:08:20] 2025-10-21 04:07:44,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 00:08:20] 2025-10-21 04:07:44,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 00:08:20] 2025-10-21 04:07:44,958 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-21 00:08:20] 2025-10-21 04:07:44,958 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 00:08:20] 2025-10-21 04:07:44,958 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 00:08:20] 2025-10-21 04:07:44,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 00:08:20] 2025-10-21 04:07:44,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 00:08:20] 2025-10-21 04:07:45,112 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-21 00:08:20] 2025-10-21 04:07:45,112 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-21 00:08:20] 2025-10-21 04:07:45,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 00:08:20] 2025-10-21 04:07:45,113 | INFO     | will abort loop
[2025-10-21 00:08:20] 2025-10-21 04:07:45,242 | INFO     | all data control threads have been joined
[2025-10-21 00:08:20] 2025-10-21 04:07:45,726 | INFO     | all job control threads have been joined
[2025-10-21 00:08:20] 2025-10-21 04:07:45,963 | INFO     | [job] retrieve thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:45,963 | INFO     | [job] queue monitor thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:46,066 | INFO     | [payload] failed_post thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:46,118 | INFO     | [job] job monitor thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:46,243 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:46,247 | INFO     | [data] control thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:46,267 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:46,320 | INFO     | all payload control threads have been joined
[2025-10-21 00:08:20] 2025-10-21 04:07:46,334 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:46,373 | INFO     | [data] copytool_in thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:46,731 | INFO     | [job] control thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:46,966 | INFO     | [data] copytool_out thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:47,115 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:47,130 | INFO     | [payload] validate_post thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:47,325 | INFO     | [payload] control thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:47,331 | INFO     | [job] validate thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:07:47,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 00:08:20] 2025-10-21 04:07:51,553 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 00:08:20] 2025-10-21 04:08:14,123 | INFO     | [monitor] cgroup control has ended
[2025-10-21 00:08:20] 2025-10-21 04:08:15,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913438689088)>', '<ExcThread(monitor, started 139912653305600)>']
[2025-10-21 00:08:20] 2025-10-21 04:08:15,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 00:08:20] 2025-10-21 04:08:15,110 | INFO     | [monitor] control thread has ended
[2025-10-21 00:08:20] 2025-10-21 04:08:20,072 | INFO     | all workflow threads have been joined
[2025-10-21 00:08:20] 2025-10-21 04:08:20,072 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 00:08:20] 2025-10-21 04:08:20,072 | INFO     | traces error code: 0
[2025-10-21 00:08:20] 2025-10-21 04:08:20,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 00:08:20] 2025-10-21 04:08:20,160 [wrapper] ==== pilot stdout END ====
[2025-10-21 00:08:20] 2025-10-21 04:08:20,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 00:08:20] 2025-10-21 04:08:20,168 [wrapper] pilotpid: 31452
[2025-10-21 00:08:20] 2025-10-21 04:08:20,173 [wrapper] Pilot exit status: 0
[2025-10-21 00:08:20] 2025-10-21 04:08:20,188 [wrapper] pandaids: 6852946641
[2025-10-21 00:08:20] 2025-10-21 04:08:20,227 [wrapper] cleanup supervisor_pilot 22741 31453
[2025-10-21 00:08:20] 2025-10-21 04:08:20,231 [wrapper] Test setup, not cleaning
[2025-10-21 00:08:20] 2025-10-21 04:08:20,235 [wrapper] apfmon messages muted
[2025-10-21 00:08:20] 2025-10-21 04:08:20,239 [wrapper] ==== wrapper stdout END ====
[2025-10-21 00:08:20] 2025-10-21 04:08:20,243 [wrapper] ==== wrapper stderr END ====
[2025-10-21 00:08:20]  *** Error codes and diagnostics ***
[2025-10-21 00:08:20]     "exeErrorCode": 0,
[2025-10-21 00:08:20]     "exeErrorDiag": "",
[2025-10-21 00:08:20]     "pilotErrorCode": 0,
[2025-10-21 00:08:20]     "pilotErrorDiag": "",
[2025-10-21 00:08:20]  *** Listing of results directory ***
[2025-10-21 00:08:20] total 439080
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas    557409 Oct 20 17:57 pilot3.tar.gz
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas      5112 Oct 20 18:14 queuedata.json
[2025-10-21 00:08:20] -rwx------ 1 boincer umatlas     36292 Oct 20 18:15 runpilot2-wrapper.sh
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas       100 Oct 20 22:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 00:08:20] -rwxr-xr-x 1 boincer umatlas      7986 Oct 20 22:47 run_atlas
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas       105 Oct 20 22:47 job.xml
[2025-10-21 00:08:20] -rw-r--r-- 2 boincer umatlas 229758341 Oct 20 22:47 EVNT.46771634._002115.pool.root.1
[2025-10-21 00:08:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 20 22:47 start_atlas.sh
[2025-10-21 00:08:20] drwxrwx--x 2 boincer umatlas      4096 Oct 20 22:47 shared
[2025-10-21 00:08:20] -rw-r--r-- 2 boincer umatlas    569679 Oct 20 22:47 input.tar.gz
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas         0 Oct 20 22:47 boinc_lockfile
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas      2560 Oct 20 22:47 pandaJob.out
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas    978830 Oct 20 22:48 agis_schedconf.cvmfs.json
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas   1560740 Oct 20 22:48 agis_ddmendpoints.agis.ALL.json
[2025-10-21 00:08:20] drwx------ 5 boincer umatlas      4096 Oct 20 22:48 pilot3
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas      5952 Oct 21 00:04 init_data.xml
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas 213803155 Oct 21 00:07 HITS.46771637._053368.pool.root.1
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas        95 Oct 21 00:07 pilot_heartbeat.json
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas       529 Oct 21 00:07 boinc_task_state.xml
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas      1062 Oct 21 00:07 memory_monitor_summary.json
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas    382262 Oct 21 00:07 log.46771637._053368.job.log.tgz.1
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas      7855 Oct 21 00:07 heartbeat.json
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas        27 Oct 21 00:07 wrapper_checkpoint.txt
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas      8192 Oct 21 00:07 boinc_mmap_file
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas      4738 Oct 21 00:08 pilotlog.txt
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas    690433 Oct 21 00:08 log.46771637._053368.job.log.1
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas       357 Oct 21 00:08 output.list
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas       620 Oct 21 00:08 runtime_log
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas   1095680 Oct 21 00:08 result.tar.gz
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas      8700 Oct 21 00:08 runtime_log.err
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas       658 Oct 21 00:08 PQXKDmYLDV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmM1dMDm3oZqan.diag
[2025-10-21 00:08:20] -rw-r--r-- 1 boincer umatlas     22013 Oct 21 00:08 stderr.txt
[2025-10-21 00:08:20] HITS file was successfully produced:
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas 213803155 Oct 21 00:07 shared/HITS.pool.root.1
[2025-10-21 00:08:20]  *** Contents of shared directory: ***
[2025-10-21 00:08:20] total 434824
[2025-10-21 00:08:20] -rw-r--r-- 2 boincer umatlas 229758341 Oct 20 22:47 ATLAS.root_0
[2025-10-21 00:08:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 20 22:47 start_atlas.sh
[2025-10-21 00:08:20] -rw-r--r-- 2 boincer umatlas    569679 Oct 20 22:47 input.tar.gz
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas 213803155 Oct 21 00:07 HITS.pool.root.1
[2025-10-21 00:08:20] -rw------- 1 boincer umatlas   1095680 Oct 21 00:08 result.tar.gz
00:08:22 (27651): run_atlas exited; CPU time 51933.234387
00:08:22 (27651): called boinc_finish(0)

</stderr_txt>
]]>

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