Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:18:49 (1973046): wrapper (7.7.26015): starting
06:18:49 (1973046): wrapper: running run_atlas (--nthreads 4)
[2025-10-21 06:18:49] Arguments: --nthreads 4
[2025-10-21 06:18:49] Threads: 4
[2025-10-21 06:18:49] Checking for CVMFS
[2025-10-21 06:18:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 06:18:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 06:18:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 06:18:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 06:18:50] 2.9.2.0 1897483 240 62000 151946 0 56 24821148 36864000 0 130560 0 196858 99.985 10762 1725 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-21 06:18:50] CVMFS is ok
[2025-10-21 06:18:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-21 06:18:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-21 06:18:50] Further information can be found at the LHC@home message board.
[2025-10-21 06:18:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 06:18:50] Checking for apptainer binary...
[2025-10-21 06:18:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 06:18:50] Running /usr/bin/apptainer --version
[2025-10-21 06:18:50] apptainer version 1.4.1-1.1
[2025-10-21 06:18:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 06:18:50] cosA131b
[2025-10-21 06:18:50] apptainer works
[2025-10-21 06:18:50] Set ATHENA_PROC_NUMBER=4
[2025-10-21 06:18:50] Set ATHENA_CORE_NUMBER=4
[2025-10-21 06:18:50] Starting ATLAS job with PandaID=6852956077
[2025-10-21 06:18:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 07:34:29]  *** The last 200 lines of the pilot log: ***
[2025-10-21 07:34:29] 2025-10-21 05:33:48,594 | INFO     | summary of transferred files:
[2025-10-21 07:34:29] 2025-10-21 05:33:48,594 | INFO     |  -- lfn=log.46771637._057437.job.log.tgz.1, status_code=0, status=transferred
[2025-10-21 07:34:29] 2025-10-21 05:33:48,594 | INFO     | stage-out finished correctly
[2025-10-21 07:34:29] 2025-10-21 05:33:48,716 | INFO     | PID=1976833 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 07:34:29] 2025-10-21 05:33:49,717 | INFO     | time since job start (4491s) is within the limit (172800.0s)
[2025-10-21 07:34:29] 2025-10-21 05:33:50,542 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-21 07:34:29] 2025-10-21 05:33:51,287 | INFO     | job 6852956077 has state=finished
[2025-10-21 07:34:29] 2025-10-21 05:33:51,287 | INFO     | preparing for final server update for job 6852956077 in state='finished'
[2025-10-21 07:34:29] 2025-10-21 05:33:51,287 | INFO     | this job has now completed (state=finished)
[2025-10-21 07:34:29] 2025-10-21 05:33:51,287 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-21 07:34:29] 2025-10-21 05:33:51,288 | INFO     | log transfer has been attempted: DONE
[2025-10-21 07:34:29] 2025-10-21 05:33:51,288 | INFO     | job 6852956077 has finished - writing final server update
[2025-10-21 07:34:29] 2025-10-21 05:33:51,288 | INFO     | total number of processed events: 400 (read)
[2025-10-21 07:34:29] 2025-10-21 05:33:51,288 | INFO     | executing command: lscpu
[2025-10-21 07:34:29] 2025-10-21 05:33:51,310 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-21 07:34:29] 2025-10-21 05:33:51,723 | INFO     | time since job start (4493s) is within the limit (172800.0s)
[2025-10-21 07:34:29] 2025-10-21 05:33:53,728 | INFO     | time since job start (4495s) is within the limit (172800.0s)
[2025-10-21 07:34:29] 2025-10-21 05:33:54,049 | WARNING  | process 1983376 can no longer be monitored (due to stat problems) - aborting
[2025-10-21 07:34:29] 2025-10-21 05:33:54,049 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6852956077/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 07:34:29] 2025-10-21 05:33:54,050 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6852956077/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 07:34:29] 2025-10-21 05:33:54,050 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-21 07:34:29] 2025-10-21 05:33:54,050 | WARNING  | maxPSS not found in memory monitor output
[2025-10-21 07:34:29] 2025-10-21 05:33:54,050 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2040812 B
[2025-10-21 07:34:29] 2025-10-21 05:33:54,050 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16034 B
[2025-10-21 07:34:29] 2025-10-21 05:33:54,050 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-21 07:34:29] 2025-10-21 05:33:55,734 | INFO     | time since job start (4497s) is within the limit (172800.0s)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,771 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-21 07:34:29] 2025-10-21 05:33:56,776 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3521.324375
[2025-10-21 07:34:29] 2025-10-21 05:33:56,778 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6852956077/memory_monitor_summary.json (trf name=prmon)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,779 | INFO     | extracted standard info from prmon json
[2025-10-21 07:34:29] 2025-10-21 05:33:56,779 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 07:34:29] 2025-10-21 05:33:56,779 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 07:34:29] 2025-10-21 05:33:56,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 07:34:29] 2025-10-21 05:33:56,780 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 07:34:29] 2025-10-21 05:33:56,781 | INFO     | fitting pss+swap vs Time
[2025-10-21 07:34:29] 2025-10-21 05:33:56,781 | INFO     | sum of square deviations: 93240818.0
[2025-10-21 07:34:29] 2025-10-21 05:33:56,781 | INFO     | sum of deviations: -8027701199.000001
[2025-10-21 07:34:29] 2025-10-21 05:33:56,781 | INFO     | mean x: 1761022680.0
[2025-10-21 07:34:29] 2025-10-21 05:33:56,781 | INFO     | mean y: 2585802.074626866
[2025-10-21 07:34:29] 2025-10-21 05:33:56,781 | INFO     | -- intersect: 151620344879.45847
[2025-10-21 07:34:29] 2025-10-21 05:33:56,781 | INFO     | intersect: 151620344879.45847
[2025-10-21 07:34:29] 2025-10-21 05:33:56,781 | INFO     | chi2: 0.042481723147964216
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | -- intersect: 151620344879.45847
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | current memory leak: -86.10 B/s (using 67 data points, chi2=0.04)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | could have reported an average CPU frequency of 3674 MHz (6 samples)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | ..............................
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | . Timing measurements:
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | . get job = 0 s
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | . initial setup = 1 s
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | . payload setup = 4 s
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | . stage-in = 0 s
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | . payload execution = 4467 s
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | . stage-out = 0 s
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | . log creation = 0 s
[2025-10-21 07:34:29] 2025-10-21 05:33:56,782 | INFO     | ..............................
[2025-10-21 07:34:29] 2025-10-21 05:33:56,800 | INFO     | sufficient remaining disk space (331535613952 B)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,810 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | 
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | job summary report
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | --------------------------------------------------
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | PanDA job id: 6852956077
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | task id: 46771637
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | errors: (none)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | pilot state: finished 
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | transexitcode: 0
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | exeerrorcode: 0
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | exeerrordiag: 
[2025-10-21 07:34:29] 2025-10-21 05:33:56,824 | INFO     | exitcode: 0
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | exitmsg: OK
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | cpuconsumptiontime: 16949 s
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | nevents: 400
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | neventsw: 0
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | pid: 1983376
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | pgrp: 1983376
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | corecount: 4
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | event service: False
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | sizes: {0: 2348934, 4: 2349196, 11: 2349224, 4476: 2384474, 4478: 2384474, 4484: 2384668}
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | --------------------------------------------------
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | 
[2025-10-21 07:34:29] 2025-10-21 05:33:56,825 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-21 07:34:29] 2025-10-21 05:33:56,829 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6852956077: 2336793 B (within 2537553920 B limit)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,829 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6852956077/HITS.46771637._057437.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,829 | INFO     | total size of present files: 0 B (workdir size: 2336793 B)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,829 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6852956077/HITS.46771637._057437.pool.root.1 since it does not exist
[2025-10-21 07:34:29] 2025-10-21 05:33:56,843 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,843 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,843 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,843 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | job 6852956077 has completed (purged errors)
[2025-10-21 07:34:29] 2025-10-21 05:33:56,844 | INFO     | overall cleanup function is called
[2025-10-21 07:34:29] 2025-10-21 05:33:56,876 | INFO     | number of running child processes to parent process 1983376: 1
[2025-10-21 07:34:29] 2025-10-21 05:33:56,876 | INFO     | maximum number of monitored processes: 6
[2025-10-21 07:34:29] 2025-10-21 05:33:56,876 | INFO     | aborting job monitoring since job object (job id=6852956077) has expired
[2025-10-21 07:34:29] 2025-10-21 05:33:56,888 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-21 07:34:29] 2025-10-21 05:33:57,851 | INFO     | --- collectZombieJob: --- 10, [1983376]
[2025-10-21 07:34:29] 2025-10-21 05:33:57,851 | INFO     | zombie collector waiting for pid 1983376
[2025-10-21 07:34:29] 2025-10-21 05:33:57,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 07:34:29] 2025-10-21 05:33:57,852 | INFO     | collected zombie processes
[2025-10-21 07:34:29] 2025-10-21 05:33:57,852 | INFO     | will attempt to kill all subprocesses of pid=1983376
[2025-10-21 07:34:29] 2025-10-21 05:33:57,895 | INFO     | process IDs to be killed: [1983376] (in reverse order)
[2025-10-21 07:34:29] 2025-10-21 05:33:57,927 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 07:34:29] 2025-10-21 05:33:57,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 07:34:29] 2025-10-21 05:33:57,929 | INFO     | did not find any defunct processes belonging to 1983376
[2025-10-21 07:34:29] 2025-10-21 05:33:57,930 | INFO     | did not find any defunct processes belonging to 1983376
[2025-10-21 07:34:29] 2025-10-21 05:33:57,930 | INFO     | ready for new job
[2025-10-21 07:34:29] 2025-10-21 05:33:57,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 07:34:29] 2025-10-21 05:33:57,931 | INFO     | ***************************************
[2025-10-21 07:34:29] 2025-10-21 05:33:57,931 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 07:34:29] 2025-10-21 05:33:57,931 | INFO     | ***************************************
[2025-10-21 07:34:29] 2025-10-21 05:33:57,931 | INFO     | 
[2025-10-21 07:34:29] 2025-10-21 05:33:57,932 | INFO     | architecture information:
[2025-10-21 07:34:29] 2025-10-21 05:33:57,932 | INFO     | executing command: cat /etc/os-release
[2025-10-21 07:34:29] 2025-10-21 05:33:57,946 | INFO     | cat /etc/os-release:
[2025-10-21 07:34:29] NAME="CentOS Linux"
[2025-10-21 07:34:29] VERSION="7 (Core)"
[2025-10-21 07:34:29] ID="centos"
[2025-10-21 07:34:29] ID_LIKE="rhel fedora"
[2025-10-21 07:34:29] VERSION_ID="7"
[2025-10-21 07:34:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 07:34:29] ANSI_COLOR="0;31"
[2025-10-21 07:34:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 07:34:29] HOME_URL="https://www.centos.org/"
[2025-10-21 07:34:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 07:34:29] 
[2025-10-21 07:34:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 07:34:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 07:34:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 07:34:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 07:34:29] 
[2025-10-21 07:34:29] 2025-10-21 05:33:57,946 | INFO     | ***************************************
[2025-10-21 07:34:29] 2025-10-21 05:33:58,449 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-21 07:34:29] 2025-10-21 05:33:58,465 | INFO     | sufficient remaining disk space (331538759680 B)
[2025-10-21 07:34:29] 2025-10-21 05:33:58,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 07:34:29] 2025-10-21 05:33:58,465 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 07:34:29] 2025-10-21 05:33:58,465 | INFO     | update_server=False
[2025-10-21 07:34:29] 2025-10-21 05:33:58,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 07:34:29] 2025-10-21 05:33:58,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 07:34:29] 2025-10-21 05:33:58,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 07:34:29] 2025-10-21 05:33:58,466 | INFO     | aborting loop
[2025-10-21 07:34:29] 2025-10-21 05:33:58,850 | INFO     | all payload control threads have been joined
[2025-10-21 07:34:29] 2025-10-21 05:33:59,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 07:34:29] 2025-10-21 05:33:59,411 | INFO     | all job control threads have been joined
[2025-10-21 07:34:29] 2025-10-21 05:33:59,421 | INFO     | all data control threads have been joined
[2025-10-21 07:34:29] 2025-10-21 05:33:59,471 | INFO     | [job] retrieve thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:33:59,471 | INFO     | [job] job monitor thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:33:59,472 | INFO     | [job] queue monitor thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:33:59,716 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:33:59,724 | INFO     | [payload] failed_post thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:33:59,768 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:33:59,772 | INFO     | [data] copytool_in thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:33:59,856 | INFO     | [payload] control thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:34:00,398 | INFO     | [job] validate thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:34:00,417 | INFO     | [job] control thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:34:00,426 | INFO     | [data] control thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:34:00,461 | INFO     | [payload] validate_post thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:34:00,475 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:34:00,576 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:34:01,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 07:34:29] 2025-10-21 05:34:01,154 | INFO     | [data] copytool_out thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:34:03,386 | INFO     | [monitor] cgroup control has ended
[2025-10-21 07:34:29] 2025-10-21 05:34:05,101 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 07:34:29] 2025-10-21 05:34:05,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140709153232704)>', '<ExcThread(monitor, started 140708111423232)>']
[2025-10-21 07:34:29] 2025-10-21 05:34:10,979 | INFO     | all workflow threads have been joined
[2025-10-21 07:34:29] 2025-10-21 05:34:10,980 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 07:34:29] 2025-10-21 05:34:10,980 | INFO     | traces error code: 0
[2025-10-21 07:34:29] 2025-10-21 05:34:10,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 07:34:29] 2025-10-21 05:34:28,867 | INFO     | PID=1976833 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-21 07:34:29] 2025-10-21 05:34:28,868 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 07:34:29] 2025-10-21 05:34:28,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 07:34:29] 2025-10-21 05:34:28,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 07:34:29] 2025-10-21 05:34:28,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 07:34:29] 2025-10-21 05:34:28,868 | CRITICAL | thread 'MainThread' is not alive
[2025-10-21 07:34:29] 2025-10-21 05:34:28,868 | INFO     | [monitor] control thread has ended
[2025-10-21 07:34:29] 2025-10-21 05:34:28,943 [wrapper] ==== pilot stdout END ====
[2025-10-21 07:34:29] 2025-10-21 05:34:28,947 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 07:34:29] 2025-10-21 05:34:28,951 [wrapper] pilotpid: 1976833
[2025-10-21 07:34:29] 2025-10-21 05:34:28,955 [wrapper] Pilot exit status: 0
[2025-10-21 07:34:29] 2025-10-21 05:34:28,966 [wrapper] pandaids: 6852956077
[2025-10-21 07:34:29] 2025-10-21 05:34:28,988 [wrapper] cleanup supervisor_pilot 1997955 1976834
[2025-10-21 07:34:29] 2025-10-21 05:34:28,992 [wrapper] Test setup, not cleaning
[2025-10-21 07:34:29] 2025-10-21 05:34:28,996 [wrapper] apfmon messages muted
[2025-10-21 07:34:29] 2025-10-21 05:34:29,000 [wrapper] ==== wrapper stdout END ====
[2025-10-21 07:34:29] 2025-10-21 05:34:29,004 [wrapper] ==== wrapper stderr END ====
[2025-10-21 07:34:29]  *** Error codes and diagnostics ***
[2025-10-21 07:34:29]     "exeErrorCode": 0,
[2025-10-21 07:34:29]     "exeErrorDiag": "",
[2025-10-21 07:34:29]     "pilotErrorCode": 0,
[2025-10-21 07:34:29]     "pilotErrorDiag": "",
[2025-10-21 07:34:29]  *** Listing of results directory ***
[2025-10-21 07:34:29] total 420092
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc    557409 Oct 21 01:48 pilot3.tar.gz
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc      5112 Oct 21 02:39 queuedata.json
[2025-10-21 07:34:29] -rwx------ 1 boinc boinc     36292 Oct 21 02:39 runpilot2-wrapper.sh
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc       100 Oct 21 06:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 07:34:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 21 06:18 run_atlas
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc       105 Oct 21 06:18 job.xml
[2025-10-21 07:34:29] -rw-r--r-- 2 boinc boinc 225532462 Oct 21 06:18 EVNT.46771634._002253.pool.root.1
[2025-10-21 07:34:29] -rw-r--r-- 2 boinc boinc    569672 Oct 21 06:18 input.tar.gz
[2025-10-21 07:34:29] -rw-r--r-- 2 boinc boinc     15120 Oct 21 06:18 start_atlas.sh
[2025-10-21 07:34:29] drwxrwx--x 2 boinc boinc      4096 Oct 21 06:18 shared
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc         0 Oct 21 06:18 boinc_setup_complete
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc      6378 Oct 21 06:18 init_data.xml
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc         0 Oct 21 06:18 boinc_lockfile
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc      2560 Oct 21 06:18 pandaJob.out
[2025-10-21 07:34:29] -rw------- 1 boinc boinc    978830 Oct 21 06:18 agis_schedconf.cvmfs.json
[2025-10-21 07:34:29] -rw------- 1 boinc boinc   1560740 Oct 21 06:18 agis_ddmendpoints.agis.ALL.json
[2025-10-21 07:34:29] drwx------ 5 boinc boinc      4096 Oct 21 06:18 pilot3
[2025-10-21 07:34:29] -rw------- 1 boinc boinc 198908943 Oct 21 07:33 HITS.46771637._057437.pool.root.1
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc       529 Oct 21 07:33 boinc_task_state.xml
[2025-10-21 07:34:29] -rw------- 1 boinc boinc      1023 Oct 21 07:33 memory_monitor_summary.json
[2025-10-21 07:34:29] -rw------- 1 boinc boinc    251285 Oct 21 07:33 log.46771637._057437.job.log.tgz.1
[2025-10-21 07:34:29] -rw------- 1 boinc boinc      7768 Oct 21 07:33 heartbeat.json
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc      8192 Oct 21 07:34 boinc_mmap_file
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc        27 Oct 21 07:34 wrapper_checkpoint.txt
[2025-10-21 07:34:29] -rw------- 1 boinc boinc       817 Oct 21 07:34 pilotlog.txt
[2025-10-21 07:34:29] -rw------- 1 boinc boinc        95 Oct 21 07:34 pilot_heartbeat.json
[2025-10-21 07:34:29] -rw------- 1 boinc boinc    665976 Oct 21 07:34 log.46771637._057437.job.log.1
[2025-10-21 07:34:29] -rw------- 1 boinc boinc       357 Oct 21 07:34 output.list
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc       620 Oct 21 07:34 runtime_log
[2025-10-21 07:34:29] -rw------- 1 boinc boinc    931840 Oct 21 07:34 result.tar.gz
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc      8787 Oct 21 07:34 runtime_log.err
[2025-10-21 07:34:29] -rw------- 1 boinc boinc       660 Oct 21 07:34 jbxLDmAaFV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnPeMDm9rGejm.diag
[2025-10-21 07:34:29] -rw-r--r-- 1 boinc boinc     22425 Oct 21 07:34 stderr.txt
[2025-10-21 07:34:29] HITS file was successfully produced:
[2025-10-21 07:34:29] -rw------- 1 boinc boinc 198908943 Oct 21 07:33 shared/HITS.pool.root.1
[2025-10-21 07:34:29]  *** Contents of shared directory: ***
[2025-10-21 07:34:29] total 415992
[2025-10-21 07:34:29] -rw-r--r-- 2 boinc boinc 225532462 Oct 21 06:18 ATLAS.root_0
[2025-10-21 07:34:29] -rw-r--r-- 2 boinc boinc    569672 Oct 21 06:18 input.tar.gz
[2025-10-21 07:34:29] -rw-r--r-- 2 boinc boinc     15120 Oct 21 06:18 start_atlas.sh
[2025-10-21 07:34:29] -rw------- 1 boinc boinc 198908943 Oct 21 07:33 HITS.pool.root.1
[2025-10-21 07:34:29] -rw------- 1 boinc boinc    931840 Oct 21 07:34 result.tar.gz
07:34:30 (1973046): run_atlas exited; CPU time 16961.814631
07:34:30 (1973046): called boinc_finish(0)

</stderr_txt>
]]>

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