Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:52:06 (21856): wrapper (7.7.26015): starting
21:52:06 (21856): wrapper: running run_atlas (--nthreads 8)
[2025-10-20 21:52:06] Arguments: --nthreads 8
[2025-10-20 21:52:06] Threads: 8
[2025-10-20 21:52:06] Checking for CVMFS
[2025-10-20 21:52:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-20 21:52:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-20 21:52:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-20 21:52:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-20 21:52:07] 2.11.2.0 3026 26134 82600 151941 2 57 12249559 20275200 1 130560 0 14624309 99.981 1178529 37104 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-20 21:52:07] CVMFS is ok
[2025-10-20 21:52:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-20 21:52:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-20 21:52:07] Further information can be found at the LHC@home message board.
[2025-10-20 21:52:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-20 21:52:07] Checking for apptainer binary...
[2025-10-20 21:52:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-20 21:52:07] Running /usr/bin/apptainer --version
[2025-10-20 21:52:07] apptainer version 1.3.2-1.el7
[2025-10-20 21:52:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-20 21:52:09] c-204-25.aglt2.org
[2025-10-20 21:52:09] apptainer works
[2025-10-20 21:52:09] Set ATHENA_PROC_NUMBER=8
[2025-10-20 21:52:09] Set ATHENA_CORE_NUMBER=8
[2025-10-20 21:52:09] Starting ATLAS job with PandaID=6852949085
[2025-10-20 21:52:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 00:13:46]  *** The last 200 lines of the pilot log: ***
[2025-10-21 00:13:46] 2025-10-21 04:12:59,051 | INFO     | extracted standard memory fields from prmon json
[2025-10-21 00:13:46] 2025-10-21 04:12:59,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-21 00:13:46] 2025-10-21 04:12:59,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-21 00:13:46] 2025-10-21 04:12:59,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-21 00:13:46] 2025-10-21 04:12:59,055 | INFO     | fitting pss+swap vs Time
[2025-10-21 00:13:46] 2025-10-21 04:12:59,056 | INFO     | sum of square deviations: 814878534.5
[2025-10-21 00:13:46] 2025-10-21 04:12:59,056 | INFO     | sum of deviations: 3090260731.9999943
[2025-10-21 00:13:46] 2025-10-21 04:12:59,057 | INFO     | mean x: 1761015756.5
[2025-10-21 00:13:46] 2025-10-21 04:12:59,057 | INFO     | mean y: 2479478.072463768
[2025-10-21 00:13:46] 2025-10-21 04:12:59,057 | INFO     | -- intersect: -6675813801.654631
[2025-10-21 00:13:46] 2025-10-21 04:12:59,057 | INFO     | intersect: -6675813801.654631
[2025-10-21 00:13:46] 2025-10-21 04:12:59,057 | INFO     | chi2: 2.294881299978784
[2025-10-21 00:13:46] 2025-10-21 04:12:59,058 | INFO     | sum of square deviations: 729472282.0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,058 | INFO     | sum of deviations: 12323816824.0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,058 | INFO     | mean x: 1761015604.0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,059 | INFO     | mean y: 2495463.3759398498
[2025-10-21 00:13:46] 2025-10-21 04:12:59,059 | INFO     | -- intersect: -29748372751.109177
[2025-10-21 00:13:46] 2025-10-21 04:12:59,059 | INFO     | intersect: -29748372751.109177
[2025-10-21 00:13:46] 2025-10-21 04:12:59,059 | INFO     | chi2: 1.4493026645065443
[2025-10-21 00:13:46] 2025-10-21 04:12:59,059 | INFO     | current chi2=1.4493026645065443 (change=36.846290720136906 %)
[2025-10-21 00:13:46] 2025-10-21 04:12:59,060 | INFO     | sum of square deviations: 650252192.0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,060 | INFO     | sum of deviations: 11814647231.5
[2025-10-21 00:13:46] 2025-10-21 04:12:59,060 | INFO     | mean x: 1761015451.5
[2025-10-21 00:13:46] 2025-10-21 04:12:59,060 | INFO     | mean y: 2494482.9296875
[2025-10-21 00:13:46] 2025-10-21 04:12:59,061 | INFO     | -- intersect: -31993977939.1013
[2025-10-21 00:13:46] 2025-10-21 04:12:59,061 | INFO     | intersect: -31993977939.1013
[2025-10-21 00:13:46] 2025-10-21 04:12:59,061 | INFO     | chi2: 1.4514051772047296
[2025-10-21 00:13:46] 2025-10-21 04:12:59,061 | INFO     | current chi2=1.4514051772047296 (change=-0.1450706432600914 %)
[2025-10-21 00:13:46] 2025-10-21 04:12:59,061 | INFO     | right removable region: 127
[2025-10-21 00:13:46] 2025-10-21 04:12:59,061 | INFO     | sum of square deviations: 729472282.0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,062 | INFO     | sum of deviations: -15961655219.000002
[2025-10-21 00:13:46] 2025-10-21 04:12:59,062 | INFO     | mean x: 1761015909.0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,062 | INFO     | mean y: 2512884.887218045
[2025-10-21 00:13:46] 2025-10-21 04:12:59,063 | INFO     | -- intersect: 38535476327.39932
[2025-10-21 00:13:46] 2025-10-21 04:12:59,063 | INFO     | intersect: 38535476327.39932
[2025-10-21 00:13:46] 2025-10-21 04:12:59,063 | INFO     | chi2: 0.9688064104723094
[2025-10-21 00:13:46] 2025-10-21 04:12:59,063 | INFO     | current chi2=0.9688064104723094 (change=57.78402959310942 %)
[2025-10-21 00:13:46] 2025-10-21 04:12:59,063 | INFO     | sum of square deviations: 650252192.0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,064 | INFO     | sum of deviations: -14159945189.0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,064 | INFO     | mean x: 1761016061.5
[2025-10-21 00:13:46] 2025-10-21 04:12:59,064 | INFO     | mean y: 2509303.53125
[2025-10-21 00:13:46] 2025-10-21 04:12:59,064 | INFO     | -- intersect: 38350539828.56892
[2025-10-21 00:13:46] 2025-10-21 04:12:59,064 | INFO     | intersect: 38350539828.56892
[2025-10-21 00:13:46] 2025-10-21 04:12:59,065 | INFO     | chi2: 0.9518418708588162
[2025-10-21 00:13:46] 2025-10-21 04:12:59,065 | INFO     | current chi2=0.9518418708588162 (change=1.7510763172203518 %)
[2025-10-21 00:13:46] 2025-10-21 04:12:59,065 | INFO     | left removable region: 20
[2025-10-21 00:13:46] 2025-10-21 04:12:59,065 | INFO     | sum of square deviations: 379832238.0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,066 | INFO     | sum of deviations: 1762088272.9999998
[2025-10-21 00:13:46] 2025-10-21 04:12:59,066 | INFO     | mean x: 1761016031.0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,066 | INFO     | mean y: 2511239.1308411215
[2025-10-21 00:13:46] 2025-10-21 04:12:59,066 | INFO     | -- intersect: -8167057813.588965
[2025-10-21 00:13:46] 2025-10-21 04:12:59,066 | INFO     | intersect: -8167057813.588965
[2025-10-21 00:13:46] 2025-10-21 04:12:59,066 | INFO     | chi2: 0.0004016198606304584
[2025-10-21 00:13:46] 2025-10-21 04:12:59,067 | INFO     | -- intersect: -8167057813.588965
[2025-10-21 00:13:46] 2025-10-21 04:12:59,067 | INFO     | current memory leak: 4.64 B/s (using 107 data points, chi2=0.00)
[2025-10-21 00:13:46] 2025-10-21 04:12:59,067 | INFO     | could have reported an average CPU frequency of 2008 MHz (8 samples)
[2025-10-21 00:13:46] 2025-10-21 04:12:59,067 | INFO     | ..............................
[2025-10-21 00:13:46] 2025-10-21 04:12:59,068 | INFO     | . Timing measurements:
[2025-10-21 00:13:46] 2025-10-21 04:12:59,068 | INFO     | . get job = 0 s
[2025-10-21 00:13:46] 2025-10-21 04:12:59,068 | INFO     | . initial setup = 3 s
[2025-10-21 00:13:46] 2025-10-21 04:12:59,068 | INFO     | . payload setup = 8 s
[2025-10-21 00:13:46] 2025-10-21 04:12:59,068 | INFO     | . stage-in = 0 s
[2025-10-21 00:13:46] 2025-10-21 04:12:59,068 | INFO     | . payload execution = 8389 s
[2025-10-21 00:13:46] 2025-10-21 04:12:59,068 | INFO     | . stage-out = 0 s
[2025-10-21 00:13:46] 2025-10-21 04:12:59,068 | INFO     | . log creation = 0 s
[2025-10-21 00:13:46] 2025-10-21 04:12:59,068 | INFO     | ..............................
[2025-10-21 00:13:46] 2025-10-21 04:12:59,161 | INFO     | 
[2025-10-21 00:13:46] 2025-10-21 04:12:59,161 | INFO     | job summary report
[2025-10-21 00:13:46] 2025-10-21 04:12:59,161 | INFO     | --------------------------------------------------
[2025-10-21 00:13:46] 2025-10-21 04:12:59,161 | INFO     | PanDA job id: 6852949085
[2025-10-21 00:13:46] 2025-10-21 04:12:59,162 | INFO     | task id: 46771637
[2025-10-21 00:13:46] 2025-10-21 04:12:59,162 | INFO     | errors: (none)
[2025-10-21 00:13:46] 2025-10-21 04:12:59,162 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 00:13:46] 2025-10-21 04:12:59,162 | INFO     | pilot state: finished 
[2025-10-21 00:13:46] 2025-10-21 04:12:59,162 | INFO     | transexitcode: 0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,162 | INFO     | exeerrorcode: 0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,163 | INFO     | exeerrordiag: 
[2025-10-21 00:13:46] 2025-10-21 04:12:59,163 | INFO     | exitcode: 0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,163 | INFO     | exitmsg: OK
[2025-10-21 00:13:46] 2025-10-21 04:12:59,163 | INFO     | cpuconsumptiontime: 63093 s
[2025-10-21 00:13:46] 2025-10-21 04:12:59,163 | INFO     | nevents: 400
[2025-10-21 00:13:46] 2025-10-21 04:12:59,164 | INFO     | neventsw: 0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,164 | INFO     | pid: 31968
[2025-10-21 00:13:46] 2025-10-21 04:12:59,164 | INFO     | pgrp: 31968
[2025-10-21 00:13:46] 2025-10-21 04:12:59,164 | INFO     | corecount: 8
[2025-10-21 00:13:46] 2025-10-21 04:12:59,164 | INFO     | event service: False
[2025-10-21 00:13:46] 2025-10-21 04:12:59,164 | INFO     | sizes: {0: 2348103, 1: 2348959, 7: 2349221, 12: 2349249, 8401: 2377075, 8403: 2386073, 8406: 2386257, 8414: 2386451}
[2025-10-21 00:13:46] 2025-10-21 04:12:59,165 | INFO     | --------------------------------------------------
[2025-10-21 00:13:46] 2025-10-21 04:12:59,165 | INFO     | 
[2025-10-21 00:13:46] 2025-10-21 04:12:59,165 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-21 00:13:46] 2025-10-21 04:12:59,194 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,194 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,194 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,195 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,196 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,196 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,196 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,196 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,196 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,197 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 00:13:46] 2025-10-21 04:12:59,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,197 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 00:13:46] 2025-10-21 04:12:59,198 | INFO     | job 6852949085 has completed (purged errors)
[2025-10-21 00:13:46] 2025-10-21 04:12:59,198 | INFO     | overall cleanup function is called
[2025-10-21 00:13:46] 2025-10-21 04:13:00,206 | INFO     | --- collectZombieJob: --- 10, [31968]
[2025-10-21 00:13:46] 2025-10-21 04:13:00,206 | INFO     | zombie collector waiting for pid 31968
[2025-10-21 00:13:46] 2025-10-21 04:13:00,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 00:13:46] 2025-10-21 04:13:00,207 | INFO     | collected zombie processes
[2025-10-21 00:13:46] 2025-10-21 04:13:00,207 | INFO     | will attempt to kill all subprocesses of pid=31968
[2025-10-21 00:13:46] 2025-10-21 04:13:00,297 | INFO     | process IDs to be killed: [31968] (in reverse order)
[2025-10-21 00:13:46] 2025-10-21 04:13:00,356 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 00:13:46] 2025-10-21 04:13:00,357 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 00:13:46] 2025-10-21 04:13:00,360 | INFO     | did not find any defunct processes belonging to 31968
[2025-10-21 00:13:46] 2025-10-21 04:13:00,363 | INFO     | did not find any defunct processes belonging to 31968
[2025-10-21 00:13:46] 2025-10-21 04:13:00,364 | INFO     | ready for new job
[2025-10-21 00:13:46] 2025-10-21 04:13:00,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 00:13:46] 2025-10-21 04:13:00,366 | INFO     | ***************************************
[2025-10-21 00:13:46] 2025-10-21 04:13:00,366 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 00:13:46] 2025-10-21 04:13:00,366 | INFO     | ***************************************
[2025-10-21 00:13:46] 2025-10-21 04:13:00,366 | INFO     | 
[2025-10-21 00:13:46] 2025-10-21 04:13:00,367 | INFO     | architecture information:
[2025-10-21 00:13:46] 2025-10-21 04:13:00,367 | INFO     | executing command: cat /etc/os-release
[2025-10-21 00:13:46] 2025-10-21 04:13:00,386 | INFO     | cat /etc/os-release:
[2025-10-21 00:13:46] NAME="CentOS Linux"
[2025-10-21 00:13:46] VERSION="7 (Core)"
[2025-10-21 00:13:46] ID="centos"
[2025-10-21 00:13:46] ID_LIKE="rhel fedora"
[2025-10-21 00:13:46] VERSION_ID="7"
[2025-10-21 00:13:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 00:13:46] ANSI_COLOR="0;31"
[2025-10-21 00:13:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 00:13:46] HOME_URL="https://www.centos.org/"
[2025-10-21 00:13:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 00:13:46] 
[2025-10-21 00:13:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 00:13:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 00:13:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 00:13:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 00:13:46] 
[2025-10-21 00:13:46] 2025-10-21 04:13:00,387 | INFO     | ***************************************
[2025-10-21 00:13:46] 2025-10-21 04:13:00,890 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-21 00:13:46] 2025-10-21 04:13:00,912 | INFO     | sufficient remaining disk space (18515755008 B)
[2025-10-21 00:13:46] 2025-10-21 04:13:00,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 00:13:46] 2025-10-21 04:13:00,914 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 00:13:46] 2025-10-21 04:13:00,914 | INFO     | update_server=False
[2025-10-21 00:13:46] 2025-10-21 04:13:00,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 00:13:46] 2025-10-21 04:13:00,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 00:13:46] 2025-10-21 04:13:01,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 00:13:46] 2025-10-21 04:13:01,159 | INFO     | all payload control threads have been joined
[2025-10-21 00:13:46] 2025-10-21 04:13:01,279 | INFO     | all data control threads have been joined
[2025-10-21 00:13:46] 2025-10-21 04:13:01,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 00:13:46] 2025-10-21 04:13:01,312 | INFO     | aborting loop
[2025-10-21 00:13:46] 2025-10-21 04:13:01,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 00:13:46] 2025-10-21 04:13:01,921 | INFO     | [job] retrieve thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:01,921 | INFO     | [job] queue monitor thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:02,117 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:02,128 | INFO     | [payload] failed_post thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:02,164 | INFO     | [payload] control thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:02,285 | INFO     | [data] control thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:02,319 | INFO     | [job] job monitor thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:02,594 | INFO     | all job control threads have been joined
[2025-10-21 00:13:46] 2025-10-21 04:13:02,671 | INFO     | [payload] validate_post thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:02,742 | INFO     | [data] copytool_in thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:02,930 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:02,969 | INFO     | [job] validate thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:03,116 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:03,136 | INFO     | [data] copytool_out thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:03,315 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:03,599 | INFO     | [job] control thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:05,330 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 00:13:46] 2025-10-21 04:13:31,357 | INFO     | PID=25611 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-21 00:13:46] 2025-10-21 04:13:31,358 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 00:13:46] 2025-10-21 04:13:31,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 00:13:46] 2025-10-21 04:13:31,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 00:13:46] 2025-10-21 04:13:40,022 | INFO     | [monitor] cgroup control has ended
[2025-10-21 00:13:46] 2025-10-21 04:13:40,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471102281536)>', '<ExcThread(monitor, started 140470369896192)>']
[2025-10-21 00:13:46] 2025-10-21 04:13:41,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 00:13:46] 2025-10-21 04:13:41,400 | INFO     | [monitor] control thread has ended
[2025-10-21 00:13:46] 2025-10-21 04:13:45,930 | INFO     | all workflow threads have been joined
[2025-10-21 00:13:46] 2025-10-21 04:13:45,930 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 00:13:46] 2025-10-21 04:13:45,931 | INFO     | traces error code: 0
[2025-10-21 00:13:46] 2025-10-21 04:13:45,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 00:13:46] 2025-10-21 04:13:46,055 [wrapper] ==== pilot stdout END ====
[2025-10-21 00:13:46] 2025-10-21 04:13:46,059 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 00:13:46] 2025-10-21 04:13:46,064 [wrapper] pilotpid: 25611
[2025-10-21 00:13:46] 2025-10-21 04:13:46,068 [wrapper] Pilot exit status: 0
[2025-10-21 00:13:46] 2025-10-21 04:13:46,087 [wrapper] pandaids: 6852949085
[2025-10-21 00:13:46] 2025-10-21 04:13:46,140 [wrapper] cleanup supervisor_pilot 14607 25612
[2025-10-21 00:13:46] 2025-10-21 04:13:46,145 [wrapper] Test setup, not cleaning
[2025-10-21 00:13:46] 2025-10-21 04:13:46,150 [wrapper] apfmon messages muted
[2025-10-21 00:13:46] 2025-10-21 04:13:46,155 [wrapper] ==== wrapper stdout END ====
[2025-10-21 00:13:46] 2025-10-21 04:13:46,160 [wrapper] ==== wrapper stderr END ====
[2025-10-21 00:13:46]  *** Error codes and diagnostics ***
[2025-10-21 00:13:46]     "exeErrorCode": 0,
[2025-10-21 00:13:46]     "exeErrorDiag": "",
[2025-10-21 00:13:46]     "pilotErrorCode": 0,
[2025-10-21 00:13:46]     "pilotErrorDiag": "",
[2025-10-21 00:13:46]  *** Listing of results directory ***
[2025-10-21 00:13:46] total 439040
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 20 18:52 pilot3.tar.gz
[2025-10-21 00:13:46] -rwx------ 1 boincer umatlas     36292 Oct 20 19:12 runpilot2-wrapper.sh
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 20 19:12 queuedata.json
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas       100 Oct 20 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 00:13:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 20 21:52 run_atlas
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas       105 Oct 20 21:52 job.xml
[2025-10-21 00:13:46] -rw-r--r-- 2 boincer umatlas 230007974 Oct 20 21:52 EVNT.46771634._002153.pool.root.1
[2025-10-21 00:13:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 20 21:52 start_atlas.sh
[2025-10-21 00:13:46] drwxrwx--x 2 boincer umatlas      4096 Oct 20 21:52 shared
[2025-10-21 00:13:46] -rw-r--r-- 2 boincer umatlas    569680 Oct 20 21:52 input.tar.gz
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas         0 Oct 20 21:52 boinc_lockfile
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas      2560 Oct 20 21:52 pandaJob.out
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas    978830 Oct 20 21:52 agis_schedconf.cvmfs.json
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas   1560740 Oct 20 21:52 agis_ddmendpoints.agis.ALL.json
[2025-10-21 00:13:46] drwx------ 5 boincer umatlas      4096 Oct 20 21:52 pilot3
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas 212572221 Oct 21 00:12 HITS.46771637._054937.pool.root.1
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas       529 Oct 21 00:12 boinc_task_state.xml
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas      5910 Oct 21 00:12 init_data.xml
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas      1051 Oct 21 00:12 memory_monitor_summary.json
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas    366798 Oct 21 00:12 log.46771637._054937.job.log.tgz.1
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas      7843 Oct 21 00:12 heartbeat.json
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas        95 Oct 21 00:13 pilot_heartbeat.json
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 21 00:13 boinc_mmap_file
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas        27 Oct 21 00:13 wrapper_checkpoint.txt
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas      4746 Oct 21 00:13 pilotlog.txt
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas   1178479 Oct 21 00:13 log.46771637._054937.job.log.1
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas       357 Oct 21 00:13 output.list
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas       620 Oct 21 00:13 runtime_log
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas   1566720 Oct 21 00:13 result.tar.gz
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas      8703 Oct 21 00:13 runtime_log.err
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas       660 Oct 21 00:13 nIYLDmfEEV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkCeMDm1iA5nm.diag
[2025-10-21 00:13:46] -rw-r--r-- 1 boincer umatlas     20861 Oct 21 00:13 stderr.txt
[2025-10-21 00:13:46] HITS file was successfully produced:
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas 212572221 Oct 21 00:12 shared/HITS.pool.root.1
[2025-10-21 00:13:46]  *** Contents of shared directory: ***
[2025-10-21 00:13:46] total 434324
[2025-10-21 00:13:46] -rw-r--r-- 2 boincer umatlas 230007974 Oct 20 21:52 ATLAS.root_0
[2025-10-21 00:13:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 20 21:52 start_atlas.sh
[2025-10-21 00:13:46] -rw-r--r-- 2 boincer umatlas    569680 Oct 20 21:52 input.tar.gz
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas 212572221 Oct 21 00:12 HITS.pool.root.1
[2025-10-21 00:13:46] -rw------- 1 boincer umatlas   1566720 Oct 21 00:13 result.tar.gz
00:13:48 (21856): run_atlas exited; CPU time 63037.161249
00:13:48 (21856): called boinc_finish(0)

</stderr_txt>
]]>

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