Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:47:31 (2852): wrapper (7.7.26015): starting
14:47:31 (2852): wrapper: running run_atlas (--nthreads 8)
[2025-10-21 14:47:31] Arguments: --nthreads 8
[2025-10-21 14:47:31] Threads: 8
[2025-10-21 14:47:31] Checking for CVMFS
[2025-10-21 14:47:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-21 14:47:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-21 14:47:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-21 14:47:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-21 14:47:33] 2.11.2.0 10539 27851 73528 151958 0 61 19731730 25165824 4632 130560 0 8283114 99.924 3621608 1371 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-21 14:47:33] CVMFS is ok
[2025-10-21 14:47:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-21 14:47:33] Checking for apptainer binary...
[2025-10-21 14:47:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-21 14:47:33] Running /usr/bin/apptainer --version
[2025-10-21 14:47:33] apptainer version 1.3.2-1.el7
[2025-10-21 14:47:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-21 14:47:40] cg-vwn330.simple-grid.lan
[2025-10-21 14:47:40] apptainer works
[2025-10-21 14:47:40] Set ATHENA_PROC_NUMBER=8
[2025-10-21 14:47:40] Set ATHENA_CORE_NUMBER=8
[2025-10-21 14:47:40] Starting ATLAS job with PandaID=6847999291
[2025-10-21 14:47:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-21 19:34:52]  *** The last 200 lines of the pilot log: ***
[2025-10-21 19:34:52] 2025-10-21 17:33:56,486 | INFO     | sum of deviations: 40387685993.0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,486 | INFO     | mean x: 1761059561.5
[2025-10-21 19:34:52] 2025-10-21 17:33:56,486 | INFO     | mean y: 2492850.2196969697
[2025-10-21 19:34:52] 2025-10-21 17:33:56,486 | INFO     | -- intersect: -12463849302.905724
[2025-10-21 19:34:52] 2025-10-21 17:33:56,486 | INFO     | intersect: -12463849302.905724
[2025-10-21 19:34:52] 2025-10-21 17:33:56,487 | INFO     | chi2: 1.564027279591054
[2025-10-21 19:34:52] 2025-10-21 17:33:56,487 | INFO     | current chi2=1.564027279591054 (change=33.043511427473106 %)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,487 | INFO     | sum of square deviations: 5387301010.0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,490 | INFO     | sum of deviations: 39349470934.000015
[2025-10-21 19:34:52] 2025-10-21 17:33:56,490 | INFO     | mean x: 1761059409.0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,490 | INFO     | mean y: 2492352.467181467
[2025-10-21 19:34:52] 2025-10-21 17:33:56,490 | INFO     | -- intersect: -12860489667.446486
[2025-10-21 19:34:52] 2025-10-21 17:33:56,490 | INFO     | intersect: -12860489667.446486
[2025-10-21 19:34:52] 2025-10-21 17:33:56,491 | INFO     | chi2: 1.5646774770525758
[2025-10-21 19:34:52] 2025-10-21 17:33:56,491 | INFO     | current chi2=1.5646774770525758 (change=-0.04157200261186281 %)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,491 | INFO     | right removable region: 258
[2025-10-21 19:34:52] 2025-10-21 17:33:56,491 | INFO     | sum of square deviations: 5705372090.0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,494 | INFO     | sum of deviations: -18356107525.5
[2025-10-21 19:34:52] 2025-10-21 17:33:56,494 | INFO     | mean x: 1761059866.5
[2025-10-21 19:34:52] 2025-10-21 17:33:56,494 | INFO     | mean y: 2504106.246212121
[2025-10-21 19:34:52] 2025-10-21 17:33:56,494 | INFO     | -- intersect: 5668428038.705572
[2025-10-21 19:34:52] 2025-10-21 17:33:56,494 | INFO     | intersect: 5668428038.705572
[2025-10-21 19:34:52] 2025-10-21 17:33:56,495 | INFO     | chi2: 0.8573400379846166
[2025-10-21 19:34:52] 2025-10-21 17:33:56,495 | INFO     | current chi2=0.8573400379846166 (change=63.2970094542748 %)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,495 | INFO     | sum of square deviations: 5387301010.0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,497 | INFO     | sum of deviations: -19608052646.0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,498 | INFO     | mean x: 1761060019.0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,498 | INFO     | mean y: 2504690.166023166
[2025-10-21 19:34:52] 2025-10-21 17:33:56,498 | INFO     | -- intersect: 6412199916.258051
[2025-10-21 19:34:52] 2025-10-21 17:33:56,498 | INFO     | intersect: 6412199916.258051
[2025-10-21 19:34:52] 2025-10-21 17:33:56,498 | INFO     | chi2: 0.8464798057282277
[2025-10-21 19:34:52] 2025-10-21 17:33:56,498 | INFO     | current chi2=0.8464798057282277 (change=1.266735691233838 %)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,499 | INFO     | left removable region: 20
[2025-10-21 19:34:52] 2025-10-21 17:33:56,515 | INFO     | sum of square deviations: 4180243959.5
[2025-10-21 19:34:52] 2025-10-21 17:33:56,517 | INFO     | sum of deviations: 7644466838.500001
[2025-10-21 19:34:52] 2025-10-21 17:33:56,517 | INFO     | mean x: 1761059988.5
[2025-10-21 19:34:52] 2025-10-21 17:33:56,518 | INFO     | mean y: 2507460.8025210085
[2025-10-21 19:34:52] 2025-10-21 17:33:56,518 | INFO     | -- intersect: -3217965988.3852816
[2025-10-21 19:34:52] 2025-10-21 17:33:56,518 | INFO     | intersect: -3217965988.3852816
[2025-10-21 19:34:52] 2025-10-21 17:33:56,518 | INFO     | chi2: 0.0010572833456136681
[2025-10-21 19:34:52] 2025-10-21 17:33:56,518 | INFO     | -- intersect: -3217965988.3852816
[2025-10-21 19:34:52] 2025-10-21 17:33:56,519 | INFO     | current memory leak: 1.83 B/s (using 238 data points, chi2=0.00)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,519 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,519 | INFO     | ..............................
[2025-10-21 19:34:52] 2025-10-21 17:33:56,520 | INFO     | . Timing measurements:
[2025-10-21 19:34:52] 2025-10-21 17:33:56,520 | INFO     | . get job = 0 s
[2025-10-21 19:34:52] 2025-10-21 17:33:56,520 | INFO     | . initial setup = 6 s
[2025-10-21 19:34:52] 2025-10-21 17:33:56,520 | INFO     | . payload setup = 124 s
[2025-10-21 19:34:52] 2025-10-21 17:33:56,520 | INFO     | . stage-in = 0 s
[2025-10-21 19:34:52] 2025-10-21 17:33:56,520 | INFO     | . payload execution = 16544 s
[2025-10-21 19:34:52] 2025-10-21 17:33:56,520 | INFO     | . stage-out = 3 s
[2025-10-21 19:34:52] 2025-10-21 17:33:56,520 | INFO     | . log creation = 1 s
[2025-10-21 19:34:52] 2025-10-21 17:33:56,520 | INFO     | ..............................
[2025-10-21 19:34:52] 2025-10-21 17:33:56,661 | INFO     | 
[2025-10-21 19:34:52] 2025-10-21 17:33:56,661 | INFO     | job summary report
[2025-10-21 19:34:52] 2025-10-21 17:33:56,661 | INFO     | --------------------------------------------------
[2025-10-21 19:34:52] 2025-10-21 17:33:56,662 | INFO     | PanDA job id: 6847999291
[2025-10-21 19:34:52] 2025-10-21 17:33:56,662 | INFO     | task id: 46771637
[2025-10-21 19:34:52] 2025-10-21 17:33:56,662 | INFO     | errors: (none)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,662 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-21 19:34:52] 2025-10-21 17:33:56,662 | INFO     | pilot state: finished 
[2025-10-21 19:34:52] 2025-10-21 17:33:56,662 | INFO     | transexitcode: 0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,662 | INFO     | exeerrorcode: 0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,662 | INFO     | exeerrordiag: 
[2025-10-21 19:34:52] 2025-10-21 17:33:56,662 | INFO     | exitcode: 0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,663 | INFO     | exitmsg: OK
[2025-10-21 19:34:52] 2025-10-21 17:33:56,663 | INFO     | cpuconsumptiontime: 61774 s
[2025-10-21 19:34:52] 2025-10-21 17:33:56,663 | INFO     | nevents: 400
[2025-10-21 19:34:52] 2025-10-21 17:33:56,663 | INFO     | neventsw: 0
[2025-10-21 19:34:52] 2025-10-21 17:33:56,663 | INFO     | pid: 13247
[2025-10-21 19:34:52] 2025-10-21 17:33:56,663 | INFO     | pgrp: 13247
[2025-10-21 19:34:52] 2025-10-21 17:33:56,663 | INFO     | corecount: 8
[2025-10-21 19:34:52] 2025-10-21 17:33:56,663 | INFO     | event service: False
[2025-10-21 19:34:52] 2025-10-21 17:33:56,663 | INFO     | sizes: {0: 2348703, 1: 2348958, 2: 2348958, 12: 2348986, 23: 2349014, 34: 2349042, 45: 2349198, 56: 2349226, 66: 2349254, 77: 2349282, 88: 2349338, 95: 2349908, 98
[2025-10-21 19:34:52] 2025-10-21 17:33:56,663 | INFO     | --------------------------------------------------
[2025-10-21 19:34:52] 2025-10-21 17:33:56,664 | INFO     | 
[2025-10-21 19:34:52] 2025-10-21 17:33:56,664 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-21 19:34:52] 2025-10-21 17:33:56,714 | INFO     | sufficient remaining disk space (496208183296 B)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,715 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,716 | INFO     | size of work directory /var/lib/boinc/slots/11/PanDA_Pilot-6847999291: 3593422 B (within 2537553920 B limit)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,717 | INFO     | pfn file=/var/lib/boinc/slots/11/PanDA_Pilot-6847999291/HITS.46771637._027790.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,717 | INFO     | total size of present files: 0 B (workdir size: 3593422 B)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,717 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/11/PanDA_Pilot-6847999291/HITS.46771637._027790.pool.root.1 since it does not exist
[2025-10-21 19:34:52] 2025-10-21 17:33:56,785 | INFO     | time since job start (16965s) is within the limit (172800.0s)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,840 | INFO     | number of running child processes to parent process 13247: 1
[2025-10-21 19:34:52] 2025-10-21 17:33:56,841 | INFO     | maximum number of monitored processes: 8
[2025-10-21 19:34:52] 2025-10-21 17:33:56,841 | INFO     | aborting job monitoring since job object (job id=6847999291) has expired
[2025-10-21 19:34:52] 2025-10-21 17:33:56,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,854 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,854 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,854 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,855 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,855 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,855 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,855 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,855 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,855 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,855 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,856 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-21 19:34:52] 2025-10-21 17:33:56,856 | INFO     | job 6847999291 has completed (purged errors)
[2025-10-21 19:34:52] 2025-10-21 17:33:56,856 | INFO     | overall cleanup function is called
[2025-10-21 19:34:52] 2025-10-21 17:33:57,865 | INFO     | --- collectZombieJob: --- 10, [13247]
[2025-10-21 19:34:52] 2025-10-21 17:33:57,865 | INFO     | zombie collector waiting for pid 13247
[2025-10-21 19:34:52] 2025-10-21 17:33:57,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-21 19:34:52] 2025-10-21 17:33:57,866 | INFO     | collected zombie processes
[2025-10-21 19:34:52] 2025-10-21 17:33:57,866 | INFO     | will attempt to kill all subprocesses of pid=13247
[2025-10-21 19:34:52] 2025-10-21 17:33:57,982 | INFO     | process IDs to be killed: [13247] (in reverse order)
[2025-10-21 19:34:52] 2025-10-21 17:33:58,832 | WARNING  | found no corresponding commands to process id(s)
[2025-10-21 19:34:52] 2025-10-21 17:33:58,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-21 19:34:52] 2025-10-21 17:33:58,835 | INFO     | did not find any defunct processes belonging to 13247
[2025-10-21 19:34:52] 2025-10-21 17:33:58,842 | INFO     | did not find any defunct processes belonging to 13247
[2025-10-21 19:34:52] 2025-10-21 17:33:58,843 | INFO     | ready for new job
[2025-10-21 19:34:52] 2025-10-21 17:33:58,843 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-21 19:34:52] 2025-10-21 17:33:58,845 | INFO     | ***************************************
[2025-10-21 19:34:52] 2025-10-21 17:33:58,845 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-21 19:34:52] 2025-10-21 17:33:58,846 | INFO     | ***************************************
[2025-10-21 19:34:52] 2025-10-21 17:33:58,846 | INFO     | 
[2025-10-21 19:34:52] 2025-10-21 17:33:58,846 | INFO     | pilot is running in a VM
[2025-10-21 19:34:52] 2025-10-21 17:33:58,846 | INFO     | architecture information:
[2025-10-21 19:34:52] 2025-10-21 17:33:58,863 | INFO     | executing command: cat /etc/os-release
[2025-10-21 19:34:52] 2025-10-21 17:33:59,183 | INFO     | cat /etc/os-release:
[2025-10-21 19:34:52] NAME="CentOS Linux"
[2025-10-21 19:34:52] VERSION="7 (Core)"
[2025-10-21 19:34:52] ID="centos"
[2025-10-21 19:34:52] ID_LIKE="rhel fedora"
[2025-10-21 19:34:52] VERSION_ID="7"
[2025-10-21 19:34:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-21 19:34:52] ANSI_COLOR="0;31"
[2025-10-21 19:34:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-21 19:34:52] HOME_URL="https://www.centos.org/"
[2025-10-21 19:34:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-21 19:34:52] 
[2025-10-21 19:34:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-21 19:34:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-21 19:34:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-21 19:34:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-21 19:34:52] 
[2025-10-21 19:34:52] 2025-10-21 17:33:59,183 | INFO     | ***************************************
[2025-10-21 19:34:52] 2025-10-21 17:33:59,686 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-21 19:34:52] 2025-10-21 17:33:59,982 | INFO     | sufficient remaining disk space (496216571904 B)
[2025-10-21 19:34:52] 2025-10-21 17:33:59,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-21 19:34:52] 2025-10-21 17:33:59,982 | INFO     | current server update state: UPDATING_FINAL
[2025-10-21 19:34:52] 2025-10-21 17:33:59,982 | INFO     | update_server=False
[2025-10-21 19:34:52] 2025-10-21 17:33:59,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-21 19:34:52] 2025-10-21 17:33:59,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-21 19:34:52] 2025-10-21 17:34:00,275 | INFO     | all job control threads have been joined
[2025-10-21 19:34:52] 2025-10-21 17:34:00,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-21 19:34:52] 2025-10-21 17:34:00,357 | INFO     | aborting loop
[2025-10-21 19:34:52] 2025-10-21 17:34:00,461 | INFO     | all data control threads have been joined
[2025-10-21 19:34:52] 2025-10-21 17:34:00,887 | INFO     | all payload control threads have been joined
[2025-10-21 19:34:52] 2025-10-21 17:34:00,988 | INFO     | [job] retrieve thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:01,005 | INFO     | [data] copytool_in thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:01,058 | INFO     | [payload] validate_post thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:01,134 | INFO     | [payload] validate_pre thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:01,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-21 19:34:52] 2025-10-21 17:34:01,282 | INFO     | [job] control thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:01,363 | INFO     | [job] job monitor thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:01,467 | INFO     | [data] control thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:01,522 | INFO     | [payload] execute_payloads thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:01,651 | INFO     | [payload] failed_post thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:01,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-21 19:34:52] 2025-10-21 17:34:01,893 | INFO     | [payload] control thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:01,990 | INFO     | [data] copytool_out thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:02,072 | INFO     | [job] create_data_payload thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:02,144 | INFO     | [job] validate thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:02,673 | INFO     | [job] queue monitor thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:05,282 | INFO     | [data] queue_monitor thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:10,663 | INFO     | job.realtimelogging is not enabled
[2025-10-21 19:34:52] 2025-10-21 17:34:11,669 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-21 19:34:52] 2025-10-21 17:34:29,982 | INFO     | PID=6621 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-21 19:34:52] 2025-10-21 17:34:29,983 | INFO     | .. there are 9 such processes running
[2025-10-21 19:34:52] 2025-10-21 17:34:29,983 | INFO     | found 0 job(s) in 20 queues
[2025-10-21 19:34:52] 2025-10-21 17:34:29,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-21 19:34:52] 2025-10-21 17:34:29,984 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-21 19:34:52] 2025-10-21 17:34:40,418 | INFO     | [monitor] cgroup control has ended
[2025-10-21 19:34:52] 2025-10-21 17:34:42,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140290588931904)>', '<ExcThread(monitor, started 140290291635968)>']
[2025-10-21 19:34:52] 2025-10-21 17:34:43,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-21 19:34:52] 2025-10-21 17:34:43,060 | INFO     | [monitor] control thread has ended
[2025-10-21 19:34:52] 2025-10-21 17:34:47,452 | INFO     | all workflow threads have been joined
[2025-10-21 19:34:52] 2025-10-21 17:34:47,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-21 19:34:52] 2025-10-21 17:34:47,453 | INFO     | traces error code: 0
[2025-10-21 19:34:52] 2025-10-21 17:34:47,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-21 19:34:52] 2025-10-21 17:34:47,826 [wrapper] ==== pilot stdout END ====
[2025-10-21 19:34:52] 2025-10-21 17:34:47,941 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-21 19:34:52] 2025-10-21 17:34:48,059 [wrapper] pilotpid: 6621
[2025-10-21 19:34:52] 2025-10-21 17:34:48,153 [wrapper] Pilot exit status: 0
[2025-10-21 19:34:52] 2025-10-21 17:34:48,654 [wrapper] pandaids: 6847999291
[2025-10-21 19:34:52] 2025-10-21 17:34:49,573 [wrapper] cleanup supervisor_pilot  6558 6622
[2025-10-21 19:34:52] 2025-10-21 17:34:49,670 [wrapper] Test setup, not cleaning
[2025-10-21 19:34:52] 2025-10-21 17:34:49,723 [wrapper] apfmon messages muted
[2025-10-21 19:34:52] 2025-10-21 17:34:49,803 [wrapper] ==== wrapper stdout END ====
[2025-10-21 19:34:52] 2025-10-21 17:34:49,921 [wrapper] ==== wrapper stderr END ====
[2025-10-21 19:34:52]  *** Error codes and diagnostics ***
[2025-10-21 19:34:52]     "exeErrorCode": 0,
[2025-10-21 19:34:52]     "exeErrorDiag": "",
[2025-10-21 19:34:52]     "pilotErrorCode": 0,
[2025-10-21 19:34:52]     "pilotErrorDiag": "",
[2025-10-21 19:34:52]  *** Listing of results directory ***
[2025-10-21 19:34:52] total 435008
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc    557409 Oct 17 16:42 pilot3.tar.gz
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc      5112 Oct 17 16:55 queuedata.json
[2025-10-21 19:34:52] -rwx------. 1 boinc boinc     36292 Oct 17 16:56 runpilot2-wrapper.sh
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc       100 Oct 21 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-21 19:34:52] -rwxr-xr-x. 1 boinc boinc      7986 Oct 21 14:47 run_atlas
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc       105 Oct 21 14:47 job.xml
[2025-10-21 19:34:52] -rw-r--r--. 2 boinc boinc 225223474 Oct 21 14:47 EVNT.46771634._001251.pool.root.1
[2025-10-21 19:34:52] -rw-r--r--. 2 boinc boinc     15120 Oct 21 14:47 start_atlas.sh
[2025-10-21 19:34:52] drwxrwx--x. 2 boinc boinc        68 Oct 21 14:47 shared
[2025-10-21 19:34:52] -rw-r--r--. 2 boinc boinc    569674 Oct 21 14:47 input.tar.gz
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc      6390 Oct 21 14:47 init_data.xml
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc         0 Oct 21 14:47 boinc_lockfile
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc      2558 Oct 21 14:47 pandaJob.out
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc    978830 Oct 21 14:51 agis_schedconf.cvmfs.json
[2025-10-21 19:34:52] drwx------. 5 boinc boinc      4096 Oct 21 14:51 pilot3
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc 210838959 Oct 21 19:30 HITS.46771637._027790.pool.root.1
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc       531 Oct 21 19:31 boinc_task_state.xml
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc      1019 Oct 21 19:32 memory_monitor_summary.json
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc   1560740 Oct 21 19:32 agis_ddmendpoints.agis.ALL.json
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc    488364 Oct 21 19:32 log.46771637._027790.job.log.tgz.1
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc      7777 Oct 21 19:33 heartbeat.json
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc        28 Oct 21 19:34 wrapper_checkpoint.txt
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc      8192 Oct 21 19:34 boinc_mmap_file
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc        95 Oct 21 19:34 pilot_heartbeat.json
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc      4956 Oct 21 19:34 pilotlog.txt
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc   2259024 Oct 21 19:34 log.46771637._027790.job.log.1
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc       357 Oct 21 19:34 output.list
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc       620 Oct 21 19:34 runtime_log
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc   2764800 Oct 21 19:34 result.tar.gz
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc      8717 Oct 21 19:34 runtime_log.err
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc       657 Oct 21 19:34 R2eNDmg30T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmV1tNDmqiQ9rn.diag
[2025-10-21 19:34:52] -rw-r--r--. 1 boinc boinc     21117 Oct 21 19:34 stderr.txt
[2025-10-21 19:34:52] HITS file was successfully produced:
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc 210838959 Oct 21 19:30 shared/HITS.pool.root.1
[2025-10-21 19:34:52]  *** Contents of shared directory: ***
[2025-10-21 19:34:52] total 429124
[2025-10-21 19:34:52] -rw-r--r--. 2 boinc boinc 225223474 Oct 21 14:47 ATLAS.root_0
[2025-10-21 19:34:52] -rw-r--r--. 2 boinc boinc     15120 Oct 21 14:47 start_atlas.sh
[2025-10-21 19:34:52] -rw-r--r--. 2 boinc boinc    569674 Oct 21 14:47 input.tar.gz
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc 210838959 Oct 21 19:30 HITS.pool.root.1
[2025-10-21 19:34:52] -rw-------. 1 boinc boinc   2764800 Oct 21 19:34 result.tar.gz
19:34:54 (2852): run_atlas exited; CPU time 62004.779317
19:34:54 (2852): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN